Tbis013197.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tineola bisselliella
Gene Symbol
Hr39
Assembly
GCA_028551675.1
Location
JAPWLS010000496.1:83906-90127[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.16 1.4e+03 -1.7 1.6 77 163 129 220 70 252 0.46
2 4 1.1 9.3e+03 -4.4 6.2 102 162 258 320 192 341 0.47
3 4 2.8e-08 0.00025 20.6 0.1 1 21 455 475 455 489 0.90
4 4 7.9e-65 7e-61 206.8 0.0 155 408 507 771 480 771 0.84

Sequence Information

Coding Sequence
ATGGCTAGTGAGAGTGAACCAGTGAAGATTGAAGGTGGACACGTCTCTGTCACCACCATCAGTATGTCTGGAAATGAAACTAGTAACGGCCAATTTTCGTACAGCTCAAGTGGTGTTCGTATTAGCGTATCATCGGAACCTCCCATTCACGATGAAGATTCAACTGAAGCTGAATTATCTAAGATTGACTTCGCACAACATCAATATGAGGTAAATATGAGAAATAGAAAAAAGAGACCTTCAAGCGGCGCCCAATGTACGGAAAGTCTATCGGCGAGTGAAAGAGAAAGACGTATGTCGTGGGAGGGAGAGCTTTCTGATTCTGAAATGGTTATCGATACTAGTGGTAATAATGATGACAACAGCAACTCGTACGACCTCCAATCATCGCGTGACTCCATCGATACATTGCGTAATGTTACAATAAAAAATGAGCCAATGAAAATGGACAACAGATCGGATGGCTACCAAAGTTTAGATGACCAGCACGTGTTAGATCTTAATTATAATTCGTCCACACATCCGTTACAAGCCCATCAACGTAGTCTTAGTATGAATAGGATATCAGTTGTAAAAGATAATTCATCATTATTTGCAATGAGACGACCGTCATCGCCTACATCCAGTGCAAAATCATTAGTACTTAATTCTGAACAAAATATTGTACCGTCATCAATATCTGAAGTACAAAACTTAACTATAAAGAAAGAAAATAATATACAATTATCTGATGTTAAATGTGAATTAACGACATCGGTTGGATTGGACAAATTGTCGGGAACGTTACATGGCTCACCGCTGATTGGACGATTACCACGTGTACTATCGAGTGCGAGCACTGATTCAGCCGTTCATTCAATGTATACGCATAGTGTATATAGCAGTCCATCGGCAAGTCCTAGAGCGTCACGTCATTATACTCCGTCCCTTTCTCGCAACAACAGTGACGCATCGCACTCTTCTTGTTACTCATATAGTTCAGAGTTTTCACCTACTCATTCGCCAGTACAGGGACGACATCCTCACGGAGTTGTGTATAGAGAAGTAGCCAATGTCTATCCTCCATCACCAGCTCATGAAGATGATGTTGACCCCAATGATGATAGATATCATCATCATCAGGGTATTAGTCGACAGCAGCTTATTAACAGCCCAtgcccgatatgtggtgataaaataagcggttttcactacggcatattttcttgtgaatcttgcaaaggcttctttaagaggactgtacaaaatcgtaaaaactatatgtgtttgcgaggtggtaattgtccggtgactgttgcaaccaggaaaaagtgtccggcgtgtcgatttgagaagtgcctcggatgtggaatgaaattggaagCTATAAGAGAGGATCGTACCCGAGGTGGTCGTTCAACATATCAATGTTCCTACACATTATCTGGTGCAGCCTCAACTGGTTCACTCCTTTCAGCACACGCTACTGGCACATTAAGGCATGCTTCAAGTCTTACATCGGTGAATGGCCCAGGGTCATACAACAGCAGAGGTGAATCAAGTAATCGACTGTCACCAGAGATACCACCTCTATTACAGGAAATAATGGATGTAGAACATCTATGGCAATACAATGAATCCGAATTGAATCGGTTAGGCAAATCGAGCGGAAGTCCGTCTGCCAACCCCTTCTTAGCTGCTAGTGGGATTACGGCGCAGAATTCTAGTCCAGATTTTCTTGCTGATCTGTGCAAAATAGCTGATCACAGATTGTATAAAATCGTCAAATGGTGTAAGAGTTTGCCACTCTTTAAGAATATTTCTATCGACGATCAAATATGTCTATTAATAAACAGTTGGTGTGAACTACTTGTGCTGTCTTGTTGTTATCGAGGTGTAGCCACTCCTGGTGTTGTGGGAGTCGGGACTGGAGGGGGACTTACCTTACAACAGAGTGCAAAATTGGGTCTAACACCGTGTATAGAGCGAATGTTAAGCTTCACGGATCATTTAAGAAGATTAAGGGTAGACAGATACGAGTATGTGGCATTGAAAGTCATTGTATTGCTTACTTCAGATGCGTCGGAGTTGCGTGAAGCGGAGAAAGTGCGTGCGTCCCAAGAAAAAGCACTGGCAGCTCTACAGGGATACACGGCGACACATTCGCCAGACACGCCGGCTAAGTTTGGTGAACTACTTCTGCGAATACCGGAGTTACAACGAACTTGCCAGTTCTTCATGCAAGTTGGCAAAGAAATGTTGAATCCATCGAATAAAAAAGACAATGATGGTCCAAGCTTCAATCTACTGATGGAACTTCTGAGAGGTGATCATTGA
Protein Sequence
MASESEPVKIEGGHVSVTTISMSGNETSNGQFSYSSSGVRISVSSEPPIHDEDSTEAELSKIDFAQHQYEVNMRNRKKRPSSGAQCTESLSASERERRMSWEGELSDSEMVIDTSGNNDDNSNSYDLQSSRDSIDTLRNVTIKNEPMKMDNRSDGYQSLDDQHVLDLNYNSSTHPLQAHQRSLSMNRISVVKDNSSLFAMRRPSSPTSSAKSLVLNSEQNIVPSSISEVQNLTIKKENNIQLSDVKCELTTSVGLDKLSGTLHGSPLIGRLPRVLSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHGVVYREVANVYPPSPAHEDDVDPNDDRYHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFEKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHATGTLRHASSLTSVNGPGSYNSRGESSNRLSPEIPPLLQEIMDVEHLWQYNESELNRLGKSSGSPSANPFLAASGITAQNSSPDFLADLCKIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVATPGVVGVGTGGGLTLQQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDASELREAEKVRASQEKALAALQGYTATHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPSNKKDNDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01386822;
90% Identity
iTF_01453355;
80% Identity
iTF_01453355;