Basic Information

Gene Symbol
Ssb-c31a
Assembly
GCA_028551675.1
Location
JAPWLS010001585.1:361503-361956[-]

Transcription Factor Domain

TF Family
PC4
Domain
PC4 domain
PFAM
PF02229
TF Group
Unclassified Structure
Description
This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-26 4.7e-22 77.2 0.5 2 51 43 92 42 93 0.95

Sequence Information

Coding Sequence
ATGCCAAAAAACAAAAAGAAAGATGATAGTTCTAGCGACAGTGATGAAGGTCCAGTAGACCGTAATCCGCCACCAGGAAAGAAAGCCAAAATGAGCGCAAGAACTGAAGATAAAGATCCAACTTGGATTTTAGAAGGCAAAAAAATGGTTAAAGTTCGGGACTTTAAGGGGAAAATTTACATTGATATTAGAGAGTTTTATGAGAAGAACGGTGACATGTTACCTTCAAAGAAAGGGATTTGTTTAACTCCAGAGGTTTGGAGAAAGTTGTTGTCACTTGGTGATGAGATAACTGAAACTATGAGCAAGATGTGTTGA
Protein Sequence
MPKNKKKDDSSSDSDEGPVDRNPPPGKKAKMSARTEDKDPTWILEGKKMVKVRDFKGKIYIDIREFYEKNGDMLPSKKGICLTPEVWRKLLSLGDEITETMSKMC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451485;
90% Identity
iTF_01451485;
80% Identity
-