Tbis010171.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- sip1
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010001493.1:28932-35408[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0011 9.9 5.6 0.0 5 94 364 438 360 451 0.85 2 2 4.5e-34 4e-30 105.3 3.6 96 275 516 687 507 687 0.91
Sequence Information
- Coding Sequence
- ATGTCGGACGATGAAGTAATTAGATTTGAGATAACTGATTACGATCTGGATAACGAATTTAGCATTCGTAGTAGGCGAACTACTAAAGAACAGCAGATATATGGCGTATGGGCTAAAGACAGCGATGAAGAAGAAAATGAAGACAACATTCGACGGAAGTCTCGCAAACAGAAAGACTATTCGGCTCCTATTGGTTTTGTGGCTGGTGGAGTCCAACAATCCAGCAAGAAGAAGACGAAGGAACCAAAAGAATTACTCCCGTGTGAACCGAGCGCTACAGCAGCAATCACAGACTCCTCAGACTCTGAGGGTCCGGCAAGTCCCATCGCTCAGGATACTGCGGGGCTGAGAGGGACTTACAAGCCAGTACAATTAGGCGGTGACCTTGGAAACTGGGAGAAACATACCAAAGGTATAGGTGCCAAGCTTTTATTGCGGATGGGCTATCAACCTGGGAAAGGTCTAGGTAAAGACCTCCAAGGTATCTCTGCACCCGTGGAAGCCACACTTAGGAAAGGCAGAGGAGCGATTGGAGCGTATGGTCCAGAAAAATCAACACAAAAGGCAAAAAAAGAAGAAGAGAAGAGATTGAAAGAGAAGGAGGTCGAAGAAGAACCAGAAAAGAAGTCGTATCACTGGAAAAAGTCACACAAAGGGAGATATTTCTACAGAGATGCTGCTGATGTTATACAGGAAGGGAAGCCCACTCTTCACACTATTGCCAGTAATTCCTTGTCGCAGGTGCCTGTAATAGATATGCGTGGTCGGGAGTGTCGAGTATTGAGCGGTTATCATGCACTCCGAGCAGTTGCTCCTAGATATGAGCATCATCCACGCAGACAATGCACCCACTTTGCAGCACCGGAGCTGACTCACAACTTGGACCTTATGGTGGACATCTGTGAACAGGATATAATTCAGAATGCGCGTGAATTACAGAATGCTGAAGATGAAATAGTGGTGTTGGAGCGTGACTTGCAACAATGTAACATTCAAATAAGTGAACACGATGTTTATATAGATACTATGCAAGCGATTATAAGTAAAATTGAAGAACTGAATCGGCCTGATTTATGCCTGGAGGATGCGTTTGAAACACTCGCAGATATTAAGACACATTACCCGTTAGAGTATGAGATATTTAACGTAAGTGCAGCTGGTGCCACTGTGCTAAGTGCTCTATTGGTGGCAATCCCATGGAAAGTGTTATCAGAGCCGCTAGCATTGTCGGATCATCTGTTGAAAGCGAGGGCCTTGCTGGATGAGAGTTCGTACCATACGTTGTTGTATGAATGCGTCTTCACACAGATAGAGGCAGCTGCTGTGTTAGTATTCTTCTATCATGATAGCAATTTACAATTTAGCAAATACAAAACGCAATTGATAGTCTTACAACCAATTGTAATAGGAAACAGTCTCAGTAGTCGACATGGGGCAGGATGGGGCGCTTGCCCCACCGTGGCTCTGACCTGTAAGGGGTTCACGGATCATGGTAAGGTGCCGCCCTTGGAAAAGTTTGGGAAAGGCTGGTATATAGAAAATGTGGCCGCCAGGAGGGATTGGAACCCTCGTTTTCCGGAACCGATGTTAGGGGTGTATGCGATGTGTGTCAAATGCAGTAATAACATGTGTGTGGTTAGCAAATGCGTTCTAAGCAAAGTGCAGTCAGCAGTTGCGATGTGGGACCCCACCAGGGATACGCAGCCTCTACATGAGTGGTTGTTACCGTGGCATCAGTATTTGGGTGAAGAATTGTCATCATCTGTGTATCCGATAGTAAGATCTCGATTGGCAACGGCTTTACAGTCGTGGCATCCTGCTGACAGGTCTGCTCTGCCGTTATTGTCTGTTTGGAAGGTCTGGGGACCAGCCCTAACTGTGTTTGTGCAGCAGTATATTGTGCCCAAGCTGGAGGTGTTTCTGCAACAAGCCTCTGTCGAGCTTGCAGCTGGGAATTATACTTCGTGGCAGATATGTGTGGAATGGTTGCCACTAGCAGGTATACCTGTGATATCCGCATTGGCCACTAGACATGTATTGCCCATTTGGTTGGCGACATTAACCAGAACACTCAATACCACTACAGAACACTCCGCATTGCTCACTGCTTATATTGAATTCAAGAAAACATTCCCGGAAGAAATACTAAAAGAGCCAACCGTGTCGAACATATTCCGTAAGGCATTGGACATGATGAACCGGAGCGCAGACATTGATCCCAACTTGGAGGCCCCTCTGCCTCCTCGGATAACATTGCCCGAACACAAAGACATGTCGAGACTCGCCGAAGTCATCGCTTCAAGCAACACACAGAAGAGCTTCTCTGAACTTCTAGAATCTAAGTGTGTAGAGAAAGGCATCACCTTTGTGCCCGTAGCTGGGAAGTTCCGGGAAGGAAGACCGGTTTATAAAATTGGTGATACGATGCAGTGTTATGTTCTCAGGAATGTTATTATGTATTCGCCGGATTCAGGACGCACCTACCTTCCGATATCCATGGATAAGCTGCTGAAAATAGCTGACGATTGA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFSIRSRRTTKEQQIYGVWAKDSDEEENEDNIRRKSRKQKDYSAPIGFVAGGVQQSSKKKTKEPKELLPCEPSATAAITDSSDSEGPASPIAQDTAGLRGTYKPVQLGGDLGNWEKHTKGIGAKLLLRMGYQPGKGLGKDLQGISAPVEATLRKGRGAIGAYGPEKSTQKAKKEEEKRLKEKEVEEEPEKKSYHWKKSHKGRYFYRDAADVIQEGKPTLHTIASNSLSQVPVIDMRGRECRVLSGYHALRAVAPRYEHHPRRQCTHFAAPELTHNLDLMVDICEQDIIQNARELQNAEDEIVVLERDLQQCNIQISEHDVYIDTMQAIISKIEELNRPDLCLEDAFETLADIKTHYPLEYEIFNVSAAGATVLSALLVAIPWKVLSEPLALSDHLLKARALLDESSYHTLLYECVFTQIEAAAVLVFFYHDSNLQFSKYKTQLIVLQPIVIGNSLSSRHGAGWGACPTVALTCKGFTDHGKVPPLEKFGKGWYIENVAARRDWNPRFPEPMLGVYAMCVKCSNNMCVVSKCVLSKVQSAVAMWDPTRDTQPLHEWLLPWHQYLGEELSSSVYPIVRSRLATALQSWHPADRSALPLLSVWKVWGPALTVFVQQYIVPKLEVFLQQASVELAAGNYTSWQICVEWLPLAGIPVISALATRHVLPIWLATLTRTLNTTTEHSALLTAYIEFKKTFPEEILKEPTVSNIFRKALDMMNRSADIDPNLEAPLPPRITLPEHKDMSRLAEVIASSNTQKSFSELLESKCVEKGITFVPVAGKFREGRPVYKIGDTMQCYVLRNVIMYSPDSGRTYLPISMDKLLKIADD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451469;
- 90% Identity
- -
- 80% Identity
- -