Basic Information

Gene Symbol
-
Assembly
GCA_028551675.1
Location
JAPWLS010000544.1:21880-23506[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0085 7.2 6.8 0.0 23 46 117 139 107 139 0.85
2 4 8.2e-05 0.069 13.3 0.6 22 46 204 233 181 233 0.78
3 4 0.00026 0.22 11.6 0.1 3 46 271 324 269 324 0.91
4 4 0.1 88 3.3 0.1 23 46 398 420 389 420 0.86

Sequence Information

Coding Sequence
ATGGAAACAAATGTAGTACAAAATCAAGGCTATTGGTTTGTTGTCAGAGATGATCAGAGCAATGTATTCGTGTTGCGAGATGAACGTGATAGCAACGTGTTATTTAGCAGCGATAATATTCCTATTCAAAACTCTCAAACTGGTGAAACCCGCTACATTGAACCAAATGACAATACCCAATATCTACAACTCACAGAACAAGCGCTGGAACCGCAAGTTGAAGCGCCGCAAAATGAAAAGATAACAAAACTTGAAGAATTCTGGGATAAAAATAAAGTAAAACTGTTATTATCATTATGTCTTGAAGATCGATTTAGTGTCAACTCAAATGATAAGGATAAAGCCATGTGGGGCGAAATAGCAGCTCTGGTTGGGACGACACCGGAAGCCTGTAACAAGAAATACAGGAACCTAAAGAGGACGTATATAAGATTATTGAAAAACAAACGATTAGGTAAAGAGGTAAAATGGGTTCACTTCAATCTTTGTGAAGAAATATTTAAATACTACAAAACATTAAGTCCCTCCGCATTAGAAATATGGGAAGACTCCAAAATTAGACGTCTTCTTACGTTATATATAGAAAATTTAAATAGATTTCAAAATAACAATTGCATTAAGAAAGAGATTTGGAAGGAAATAGCCGCTAGTTTGGGGAAGACGGAGTATAGCTGTTATCATAAGTTCAAAAACTTGAAACGTACTTACTTCTCCTGGCTTGAGAAGAACAGGGACAGCACCAGATCACTGAAGTGGCCGTACCACCAATATTTTAATAGAATATTTTACAATTATAATCCGAATGCTGTTAGATGGAGTAGTCAAAAAATAAAACTGTTATTAGATGCTTACGCCCAAATCGGCTATAAATTTAACAGCTCAAAATTCCAGAAGAAGGAACTCTGGAAAGACATAGCAAACACGGTCGGAGAGACCGCATCGAACTGTGATCGTAAATTTAGAAATTTAAAACAAACTTATATTAAACTTAAGTACAAATCGCCAAATAGAAACGTAAAATGGAGGTACTATAAGGACTTTGAGAGCATTTTTGGGTTCGGCAATCAAAGCTGCATGGAAATGGGGAACATGTCCCGATCACAGGATGAGGATTACGTGAGACAACTGTTGACATATTACATAGATAATAAAGATAAATTCAGAAATCCATCGATAAAAAATAAAGGTCTATGGAAAATGATTGCTACAAAACTGGGATTGTCTTGTGAGGAATGCGATAAAAAATTTAGAAACCTGAAGCAGACTTATTTAAGGCTTGTTGAGAAGAAGCGAGAGACAGGTGGAGGCAACAATTGGCCTTATTTTTCATATTTTGAGATGATATACGATGATGATGATGAAGTATTGAATAAACCTGACAATAGAGTTGATGATTTATCCTTATCAGAAATAAAGACGATGGTGCAAGAAGTGGAAGAGAGAAGGGAGAATGACAGGAGATTTGAGAAACTGATAGAAGTAGCTGAAGAATCTAATAATATACAAAGAGAGAGAAATAAAATATTACAGGCATTGCTTGATAGAAGATAA
Protein Sequence
METNVVQNQGYWFVVRDDQSNVFVLRDERDSNVLFSSDNIPIQNSQTGETRYIEPNDNTQYLQLTEQALEPQVEAPQNEKITKLEEFWDKNKVKLLLSLCLEDRFSVNSNDKDKAMWGEIAALVGTTPEACNKKYRNLKRTYIRLLKNKRLGKEVKWVHFNLCEEIFKYYKTLSPSALEIWEDSKIRRLLTLYIENLNRFQNNNCIKKEIWKEIAASLGKTEYSCYHKFKNLKRTYFSWLEKNRDSTRSLKWPYHQYFNRIFYNYNPNAVRWSSQKIKLLLDAYAQIGYKFNSSKFQKKELWKDIANTVGETASNCDRKFRNLKQTYIKLKYKSPNRNVKWRYYKDFESIFGFGNQSCMEMGNMSRSQDEDYVRQLLTYYIDNKDKFRNPSIKNKGLWKMIATKLGLSCEECDKKFRNLKQTYLRLVEKKRETGGGNNWPYFSYFEMIYDDDDEVLNKPDNRVDDLSLSEIKTMVQEVEERRENDRRFEKLIEVAEESNNIQRERNKILQALLDRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451413;
90% Identity
iTF_01451413;
80% Identity
iTF_01453063;