Basic Information

Gene Symbol
-
Assembly
GCA_028551675.1
Location
JAPWLS010000544.1:21880-23506[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 7.2 1.2e+04 -3.2 0.0 6 19 81 94 77 98 0.77
2 5 0.019 31 5.0 0.0 52 86 114 147 105 148 0.82
3 5 0.0038 6.1 7.3 0.2 48 86 204 241 184 242 0.78
4 5 0.015 23 5.4 0.2 48 83 295 329 283 333 0.79
5 5 0.0015 2.4 8.6 0.1 50 85 393 427 368 429 0.85

Sequence Information

Coding Sequence
ATGGAAACAAATGTAGTACAAAATCAAGGCTATTGGTTTGTTGTCAGAGATGATCAGAGCAATGTATTCGTGTTGCGAGATGAACGTGATAGCAACGTGTTATTTAGCAGCGATAATATTCCTATTCAAAACTCTCAAACTGGTGAAACCCGCTACATTGAACCAAATGACAATACCCAATATCTACAACTCACAGAACAAGCGCTGGAACCGCAAGTTGAAGCGCCGCAAAATGAAAAGATAACAAAACTTGAAGAATTCTGGGATAAAAATAAAGTAAAACTGTTATTATCATTATGTCTTGAAGATCGATTTAGTGTCAACTCAAATGATAAGGATAAAGCCATGTGGGGCGAAATAGCAGCTCTGGTTGGGACGACACCGGAAGCCTGTAACAAGAAATACAGGAACCTAAAGAGGACGTATATAAGATTATTGAAAAACAAACGATTAGGTAAAGAGGTAAAATGGGTTCACTTCAATCTTTGTGAAGAAATATTTAAATACTACAAAACATTAAGTCCCTCCGCATTAGAAATATGGGAAGACTCCAAAATTAGACGTCTTCTTACGTTATATATAGAAAATTTAAATAGATTTCAAAATAACAATTGCATTAAGAAAGAGATTTGGAAGGAAATAGCCGCTAGTTTGGGGAAGACGGAGTATAGCTGTTATCATAAGTTCAAAAACTTGAAACGTACTTACTTCTCCTGGCTTGAGAAGAACAGGGACAGCACCAGATCACTGAAGTGGCCGTACCACCAATATTTTAATAGAATATTTTACAATTATAATCCGAATGCTGTTAGATGGAGTAGTCAAAAAATAAAACTGTTATTAGATGCTTACGCCCAAATCGGCTATAAATTTAACAGCTCAAAATTCCAGAAGAAGGAACTCTGGAAAGACATAGCAAACACGGTCGGAGAGACCGCATCGAACTGTGATCGTAAATTTAGAAATTTAAAACAAACTTATATTAAACTTAAGTACAAATCGCCAAATAGAAACGTAAAATGGAGGTACTATAAGGACTTTGAGAGCATTTTTGGGTTCGGCAATCAAAGCTGCATGGAAATGGGGAACATGTCCCGATCACAGGATGAGGATTACGTGAGACAACTGTTGACATATTACATAGATAATAAAGATAAATTCAGAAATCCATCGATAAAAAATAAAGGTCTATGGAAAATGATTGCTACAAAACTGGGATTGTCTTGTGAGGAATGCGATAAAAAATTTAGAAACCTGAAGCAGACTTATTTAAGGCTTGTTGAGAAGAAGCGAGAGACAGGTGGAGGCAACAATTGGCCTTATTTTTCATATTTTGAGATGATATACGATGATGATGATGAAGTATTGAATAAACCTGACAATAGAGTTGATGATTTATCCTTATCAGAAATAAAGACGATGGTGCAAGAAGTGGAAGAGAGAAGGGAGAATGACAGGAGATTTGAGAAACTGATAGAAGTAGCTGAAGAATCTAATAATATACAAAGAGAGAGAAATAAAATATTACAGGCATTGCTTGATAGAAGATAA
Protein Sequence
METNVVQNQGYWFVVRDDQSNVFVLRDERDSNVLFSSDNIPIQNSQTGETRYIEPNDNTQYLQLTEQALEPQVEAPQNEKITKLEEFWDKNKVKLLLSLCLEDRFSVNSNDKDKAMWGEIAALVGTTPEACNKKYRNLKRTYIRLLKNKRLGKEVKWVHFNLCEEIFKYYKTLSPSALEIWEDSKIRRLLTLYIENLNRFQNNNCIKKEIWKEIAASLGKTEYSCYHKFKNLKRTYFSWLEKNRDSTRSLKWPYHQYFNRIFYNYNPNAVRWSSQKIKLLLDAYAQIGYKFNSSKFQKKELWKDIANTVGETASNCDRKFRNLKQTYIKLKYKSPNRNVKWRYYKDFESIFGFGNQSCMEMGNMSRSQDEDYVRQLLTYYIDNKDKFRNPSIKNKGLWKMIATKLGLSCEECDKKFRNLKQTYLRLVEKKRETGGGNNWPYFSYFEMIYDDDDEVLNKPDNRVDDLSLSEIKTMVQEVEERRENDRRFEKLIEVAEESNNIQRERNKILQALLDRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451413;
90% Identity
iTF_01451413;
80% Identity
iTF_01453225;