Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_028551675.1
Location
JAPWLS010001928.1:63004-65069[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8e-16 7.9e-13 47.9 0.0 1 38 50 88 50 91 0.96
2 2 5.5e-19 5.4e-16 58.0 0.0 1 43 253 296 253 298 0.95

Sequence Information

Coding Sequence
ATGACCTTGCTTCGACACACACATGCATATAAAATAAAACTCTCTGCTAACACAGGTTCAATATCCCATGATAAGAGTTGCGAAATAAGAAAGTTAAAACGTGCCGTGTTAGAAGGTTCTCCATGCAACTCAACAAGACGAGCGTACACTGAAGAGGAACTTCAGTCTGCCCTCAAGGACATTCAGACGGGGAAACTAGGGACGAGGCGGGCTGCCGTCGTCTACGGAATACCTAGGTCCACATTACGTAACAAAGTCTACAAGATGGCGTCCGATCCCAACCATGAGTCTGACGCTGAAAGCGATCCGGAGAGGGAGTCACCGCCTTCAGTTATCCTGAAAATACCCACTTTTCCACCTCCAGATGAAAAATCATCGTCACCGGCGACACCTGTCACCACTCCAGTGACACCCATCACGCCTTTGTTGCCGCATTCCCAGCCTCATCTTAATCCCCCTCTACTTCTACCACCATCTGTGTTTGCTGATCCACCATCACAGCATCTTTTTACGTCAATAAACGACGTTATAGCGAAGAGCATTAGCCAGAAATTTCAGACGCCTATAGATCGACCATCACAACAGGATCTCGCATTTATGAGGCCGGACAGGCATGTGTCCGTCATCAAGAATCCGCCGGACAACCAGCGAGGCTTTCCCGCTCCGGGTAACTCCAGAGCACAACCTAACAATAATGGTCAACCAGCCGCCGGCGGCAAAGGAACCCGGCCCAAAAGGGGGAAATATAGAAATTACGATCGGGACAGTCTCGTGGAGGCCGTTAAGGCCGTGCAGAGAGGAGAGATGAGCGTTCATAGAGCGGGCTCTTACTACGGAGTGCCACACTCCACGCTAGAGTACAAGGTTAAAGAACGTCATCTCATGAGGCCGAGAAAACGCGAGCCCAAACCGCAACCGGACTTGACGAAGCCGCAGCCGCCGAAATCTACGCCGCCGAAGCCGCCTACAAAACCGTTCTCCAACGGCCTGAATGGGCCCGAGGCTCCACCGGGCTATCCCACTGGATACCCGTTCTGGGCGGCGCCGGGTTTCGCCCCACCATCACATTCCGATATGTACGCCTCACATATGATGAGACGACTGAGGGAAGAGGCCCCGCCGCCTGCCAACGGCTCTTTTCTTGAAGGTATCATCAGATCGAGTCTCGCTAACGAGCGACCGAGTGCGGCGCTGCTGCAACGACTGACGGCGGAGCCTGCTCCCGGACTGTTGCGGCGCCTAACGGGAGACACCGATGATGGTCCTGCGGCGAGACGCGCGCGACTAGACAGCTCCGACCGGCAGTTGGCAGCAGAGATGCGCGAGGCGGTGCAGAGACTGCGCGCTGACAAGCTGCGACCGCGCAACGGAACGCCGACCCCGCCGCCCACCCCCGCCCCAGCGCCGCCTGACCGCGCCTAG
Protein Sequence
MTLLRHTHAYKIKLSANTGSISHDKSCEIRKLKRAVLEGSPCNSTRRAYTEEELQSALKDIQTGKLGTRRAAVVYGIPRSTLRNKVYKMASDPNHESDAESDPERESPPSVILKIPTFPPPDEKSSSPATPVTTPVTPITPLLPHSQPHLNPPLLLPPSVFADPPSQHLFTSINDVIAKSISQKFQTPIDRPSQQDLAFMRPDRHVSVIKNPPDNQRGFPAPGNSRAQPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLTKPQPPKSTPPKPPTKPFSNGLNGPEAPPGYPTGYPFWAAPGFAPPSHSDMYASHMMRRLREEAPPPANGSFLEGIIRSSLANERPSAALLQRLTAEPAPGLLRRLTGDTDDGPAARRARLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPPTPAPAPPDRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451384; iTF_01452254;
90% Identity
iTF_01451384;
80% Identity
-