Ttri012579.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_905220615.1
- Location
- HG992327.1:2290140-2302159[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-15 1.2e-12 47.6 0.0 1 38 144 182 144 185 0.96 2 2 7.3e-19 8.3e-16 57.7 0.0 1 43 347 390 347 392 0.95
Sequence Information
- Coding Sequence
- ATGAGTCCTGCATCCGAGTCGGACAGTAGTTCTGTTTCTGAAGCCAAAACTCCACCTGCAGGACCACCTTTACTTCAACACCTACTCCAATTACATTCTCAGGGACCACAAGCTCTGGCACAGTTCCAGCAAATGATGGCGACATTGGCGGCCATCAGCCAGGGGTTTGCGCAGACAACACCGCAAGCATGGCCCATGCAGAGGTTGCTGCAGAACAGGCAGCAACAAGAAAGGTTATCAACGGATATTGGCGAGAAGGTGTCGGTATCCAGTAATTCACCTTCGATGACGACGGAGCAGCCCCTGGATCTGAGTGCGAAGTCAACTAGCAGCGGGACACCACCTCCTGATGTTAAACTAACGGATAATGCCAGATTGAAGCGCGCTGTCTTAGAGGGCGCATCATGCAACTCCTCAAGGCGGGCCTACACAGAGGAGGAGCTCCAGTCTGCCCTCAAGGATATACAGACGGGGAAACTCGGCACGAGGAGAGCAGCTGTCGTATATGGTATACCACGGTCCACTTTACGTAATAAAGTCTATAAGATGGCGTCAGACCCTAACCACGAGTCTGATGCTGAAAGTGATCCAGACAGAGAATCACCGCCCTCCGTCATACTCAAAATACCAACGTTTCCTCCGCCAGATGAGAAGTCCTCCTCACCGGCGACACCTGTCACCACACCAGTGACCCCCATCACCCCTCTCCTGCCGCACTCTCAGCCACATCTCAATCCTCCGCTGCTACTGCCTCCCTCGGTGTACGCAGACCCGCCGACGAACCACCTCTTCACGTCGCTCAACGACGTCATAGCGAAGAGCATCAGCCAGAAGTTCAATCAAGGGCCGATCGATCGGTCAACACTTCAAGGCGACTTCATGAGGCCGGACAGGCACGTGTCCGTCATCAAAACTCCGCCGGACAACCAGCGAGGATTCCCCACACCGAGCAACTCCCGAGCGCAACCCAACAACAATGGTCAGCCTGCTGCTGGCGGCAAGGGCACCAGACCGAAGAGAGGGAAATACAGGAATTACGATAGAGACAGTCTCGTGGAGGCCGTCAAGGCAGTACAGAGGGGTGAGATGAGCGTGCACAGAGCCGGCTCGTATTATGGAGTGCCGCATTCGACGCTCGAGTACAAGGTCAAGGAGCGGCATTTGATGAGGCCGAGGAAACGCGAGCCAAAACCGCAACCGGACTTGGCCAAGCCGCAGCCGCCGAAGCCCACGCCCCCTAAACCACCGACCAAACCGTTCTCCAATGGTCTAAACGGCCCCGAAACGCCGCCGGGATACCCGGCCGGATATCCGTTTTGGCCGCCAGGATTCGCGCCGCCTTCACACTCCTCTCACGAAATGTACGCATCGCATATGATGAGGCGGCTGAGAGAGGAGGCACCGCCGCCCGCCAACGGATCCTTCCTTGAGGGAATCATTAGATCGAGTCTTGCCAACGAGCGACCGGCGCTGCTTCAACGACTAACTGCAGAGCCAGCGGTGCCGGGGTTACTGCGACGGCTTGCAGGTGAGACTGACGACGGTCCGGCGGCAAGACGTGCACGCCTGGACAGCACCGATCGTCAGCTGGCTGCAGAGATGCGCGAGGCAGTGCAGAGACTGCGCGCGGACAAGCTGCGACCGCGCAACGGTACACCGACACCGCCGCCCGCCCCAGCGCCAGCGCCGCCAGACCGTGCTTAG
- Protein Sequence
- MSPASESDSSSVSEAKTPPAGPPLLQHLLQLHSQGPQALAQFQQMMATLAAISQGFAQTTPQAWPMQRLLQNRQQQERLSTDIGEKVSVSSNSPSMTTEQPLDLSAKSTSSGTPPPDVKLTDNARLKRAVLEGASCNSSRRAYTEEELQSALKDIQTGKLGTRRAAVVYGIPRSTLRNKVYKMASDPNHESDAESDPDRESPPSVILKIPTFPPPDEKSSSPATPVTTPVTPITPLLPHSQPHLNPPLLLPPSVYADPPTNHLFTSLNDVIAKSISQKFNQGPIDRSTLQGDFMRPDRHVSVIKTPPDNQRGFPTPSNSRAQPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLAKPQPPKPTPPKPPTKPFSNGLNGPETPPGYPAGYPFWPPGFAPPSHSSHEMYASHMMRRLREEAPPPANGSFLEGIIRSSLANERPALLQRLTAEPAVPGLLRRLAGETDDGPAARRARLDSTDRQLAAEMREAVQRLRADKLRPRNGTPTPPPAPAPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01453200;
- 90% Identity
- -
- 80% Identity
- -