Basic Information

Insect: Tineola bisselliella
Gene Symbol: Unr
Assembly: GCA_028551675.1
Location: JAPWLS010001830.1:201575-207740[-]

Transcription Factor Domain

TF Family: CSD
Domain: CSD domain
PFAM: PF00313
TF Group: Beta-Scaffold Factors
Description: In molecular biology, the cold-shock domain (CSD) is a protein domain of about 70 amino acids which has been found in prokaryotic and eukaryotic DNA-binding proteins. When Escherichia coli is exposed to a temperature drop from 37 to 10 degrees Celsius, a 4–5 hour lag phase occurs, after which growth is resumed at a reduced rate.During the lag phase, the expression of around 13 proteins, which contain cold shock domains is increased 2–10 fold. These so-called 'cold shock' proteins are thought to help the cell to survive in temperatures lower than optimum growth temperature, by contrast with heat shock proteins, which help the cell to survive in temperatures greater than the optimum, possibly by condensation of the chromosome and organisation of the prokaryotic nucleoid.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.1e-16 1.4e-12 47.2 0.0 2 65 98 160 97 161 0.95

2 9 0.0011 3.9 7.4 0.0 18 58 194 234 188 242 0.69

3 9 1.1e-18 3.8e-15 55.5 0.2 2 65 252 311 251 312 0.96

4 9 0.027 94 3.0 0.0 40 64 376 402 360 404 0.82

5 9 7.5e-07 0.0027 17.5 0.0 2 63 417 482 416 485 0.84

6 9 0.006 21 5.0 0.0 15 64 514 563 501 565 0.70

7 9 1.7e-15 6.2e-12 45.2 0.1 1 56 571 625 571 635 0.88

8 9 0.096 3.4e+02 1.2 0.0 38 53 694 709 674 716 0.86

9 9 8.3e-14 2.9e-10 39.8 0.0 2 65 724 787 723 788 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.1e-16	1.4e-12	47.2	0.0	2	65	98	160	97	161	0.95
2	9	0.0011	3.9	7.4	0.0	18	58	194	234	188	242	0.69
3	9	1.1e-18	3.8e-15	55.5	0.2	2	65	252	311	251	312	0.96
4	9	0.027	94	3.0	0.0	40	64	376	402	360	404	0.82
5	9	7.5e-07	0.0027	17.5	0.0	2	63	417	482	416	485	0.84
6	9	0.006	21	5.0	0.0	15	64	514	563	501	565	0.70
7	9	1.7e-15	6.2e-12	45.2	0.1	1	56	571	625	571	635	0.88
8	9	0.096	3.4e+02	1.2	0.0	38	53	694	709	674	716	0.86
9	9	8.3e-14	2.9e-10	39.8	0.0	2	65	724	787	723	788	0.90

Sequence Information

Coding Sequence: ATGGGTTCAAATCCTCAGTGGAAAATGTTCCAACCGCCGGTCTCCCACTCTTCACCCATGCAAGACATCAAGGACATCCAATTATCTAATAGTCAGCCCAAGCAGTCTTACTCTAATGGAAGCTACAGTAATGACTATCAGAGTTCTCCAAGAAACTACAGCATGTCATGCGGTAACCGACCTACCACCTTCAGCACCGATAATGCAGGCGACAGCGGCGGTGGTTTCTCATCTTCTACAACGCTTCAAGGGAATCATTTCGAATCGCATGGACACCTTCCTATTCGTGAAACTGGCATTATAGAAAAATTACTTCATTCATATGGATTTATTCAATGCTGTGAGCGCCAGGCTCGCTTGTTCTTCCACTTCAGCCAATTTAGTGGAAATATTGAACATCTTAAAATTGGTGATCCAGTTGAATTCGAAATGACGTATGATCGTCGCACAGGAAAACCAATTGCTTCAACCGTGACGAAAATAGCACCAGAAGTTGTTATGAGTGAGGCTAGAGTTACTGGCACTGTTACCACAGAAGTTAAGGGAGACGGCGGTTCAGGAGATAACACTGGACGCATTTCGTATGAAAATCGTGGTGAATGTTTCTTTTTACCATATACTAAAGACGATGTCGAAGGGAATGTAATTTTAAAACCTGGCGATGCTGTGAGCTTTCAAATTGCAACAAACCAAAGAGGCACGCTCGGCGCCTGTCATGTGCGCTTTGAAAATCCTGCGCACCCTGTTAAGTATCACGGTGTTGTATGCTCCATGAAAGAATCATTTGGATTTATTGAAAGAGCCGATGTTGTTAAGGAAATTTTCTTCCATTTTTCTGAAACTAAGATGAAAGAAGAACTGGCATTGGGAGATGATGTTGAATTTATTATACAAACCAGAAATGGAAAAGAAGTTGCCTGTAACATAACCCGACTACCAGGCGGGTCAGTTGTTTTTGAAGATGTCAGCCCAGAAATTTTGCGAGGTCAAGTATTGAAGCCATTGGAACGAGGAACTTCAGCGAGGGTACAAAATGATCCTTTACCTGGTCGCATTAGATACCGTGCACTTGACCATTCTGAAGTCGAGGTGCCTTTTGGAGATAAAGATCAATCTGGCGAGTTCACATTGCGGCATGGAGATTGGGTCGAATTCCAATTGGCTACTGATAGGCGTGACCAGCTGAAACGAGCTACAAACATCTCTCTTCTGGATGAGTCATTTAATGTTTCTGGAGAGAGGAGGGAACAAGGCGTGGTGAGTTCATTAATGGATGGCTTTGGTTACATCTCTTGTGTTGATAGAGAGCAAAAACTTATTTTTCAATTCTGTGAAGTCCTTCGTTTGGGGCAGGAAATGTGTGTTGGTGACGAGGTGGAATTTACAACTGTGCCTGTGAGTGGATTTTCCAATTCTGGCAGCAACAAGCCTTCTGCTATACGTATAAAGCATTTGCCTCAAGGGACGGTGCGCTTTGAAACCTTATTGGAACGAGGTGTACGTGGACATGTTGTCAGAGACCTTCAGGATGCCAATAGTGGTTTGATCGAGCGCAATGGTACAAAGACTACATATCCTTTCTACATGTCAAGCTGCGAAACAAAGATGAGGCCTCGTGTTGGTGATAAAGTTACTTTCGATATCTATCAGGTAAAACGTAACAAACAATTGGTAGCTTTGACTGTACAAATTCAACATCATCGTGGTATCATGCAAGGTTTTATCGCTGCTCTCAAAGATGGCTTCGGGTTTATAGAAAACAGTGATCACAATAAAGAAGTTTTCTTCCATTATAGTAATTATGAAGGTAACGCTGATAAGTTAACAATTGGCATGGAGGTAGAGTATGTCGTTGGTCGCAGTTCTACATCAAACGGGAGTTGTGCAAGTGCCGAGTTAGTTCGTTTGCTTCCCAATGGGACTATTGCTCTTCCAAAACCTATGGAGCCATCTCGTAATGGAACTGTATCCAGAGCGCTTAGATCTCTTAATCCTGGTCAAAACGAATATACAGGTGAAATCAAACAGGACAATAAAGACGCTTATTACCAGTTTGGAGTTATGGGGTTGTTGAATAAAGCGGATATACTTCAAGTTGGCGATCCAGTGTCGTTCCAAGTCGATGATGAAGGAATGGCCACTAACATTGTACCGATGCGTAAGAAACGTCGTGCTACTGTCGACACTATCAATGGTGGTTTTGGTTTCCTGTCTGTGCAAATGGAGGATTGTAAGAGACTCTTCTTCCATATGTCTGAAGTTCGTTCAAATCGCAATGAGCTTCAAGCTGGAGACACGGTCGAATTTGTCGTCTTGACTAATCCACGAAATGGAAAGTTATCTGCATGCAGTGTCATGAAAGTAACTAAGGAGCGCCCGCCGCATTTGTTAGCCCGCATTCGTAACCTTAATCTGGATCAAGATACACCACGCGTTATCGTTCTACGCACACCCAAGGGACCTGATGGCAGCCGTGGATTCCGACCCCGCCGACCTATTGCCGAGATTTTAGCATCTGAAAGTTCCTGA
Protein Sequence: MGSNPQWKMFQPPVSHSSPMQDIKDIQLSNSQPKQSYSNGSYSNDYQSSPRNYSMSCGNRPTTFSTDNAGDSGGGFSSSTTLQGNHFESHGHLPIRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNIEHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVVMSEARVTGTVTTEVKGDGGSGDNTGRISYENRGECFFLPYTKDDVEGNVILKPGDAVSFQIATNQRGTLGACHVRFENPAHPVKYHGVVCSMKESFGFIERADVVKEIFFHFSETKMKEELALGDDVEFIIQTRNGKEVACNITRLPGGSVVFEDVSPEILRGQVLKPLERGTSARVQNDPLPGRIRYRALDHSEVEVPFGDKDQSGEFTLRHGDWVEFQLATDRRDQLKRATNISLLDESFNVSGERREQGVVSSLMDGFGYISCVDREQKLIFQFCEVLRLGQEMCVGDEVEFTTVPVSGFSNSGSNKPSAIRIKHLPQGTVRFETLLERGVRGHVVRDLQDANSGLIERNGTKTTYPFYMSSCETKMRPRVGDKVTFDIYQVKRNKQLVALTVQIQHHRGIMQGFIAALKDGFGFIENSDHNKEVFFHYSNYEGNADKLTIGMEVEYVVGRSSTSNGSCASAELVRLLPNGTIALPKPMEPSRNGTVSRALRSLNPGQNEYTGEIKQDNKDAYYQFGVMGLLNKADILQVGDPVSFQVDDEGMATNIVPMRKKRRATVDTINGGFGFLSVQMEDCKRLFFHMSEVRSNRNELQAGDTVEFVVLTNPRNGKLSACSVMKVTKERPPHLLARIRNLNLDQDTPRVIVLRTPKGPDGSRGFRPRRPIAEILASESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -