Basic Information

Gene Symbol
Bgb
Assembly
GCA_028551675.1
Location
JAPWLS010001926.1:57706-61725[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-76 1.5e-72 242.6 1.6 1 163 32 187 32 191 0.97

Sequence Information

Coding Sequence
ATGCACGCAATGAGTGACCCCGCCTTGGCCGGCATGTTGCCTTTCGATTCGATTGGACTGTACGAACAACCGAAACCGCGGTTTATTTTCAAAATGCCTCGAGTTGTGCCTGATCAAAAGGGAAAATTTGAATCTGACGACCTGTTTAAAAGGCTTAGCAGAGAAAGCGAGGTTCGCTACACAAACTATCGCGATAGACCCCAAGAAGAGCGCCAGCATCGCTTCCAAGCAGGTTGCCGGGAGGGCCACACAGAAATTGCCTTCACGACAACAGGAACAAATCTACAACTAGTCTTTGATCACTCCCCATACAATTCTAGAGGATGTGATTTTCAGAAAGAGAGTGGGAAGGTACATATCGTATCACGATTCATAATGAACGGAGTATGCGTAAGGTGGCGTGGCTGGATTGATTTGGAGCGACTTGATGGTGCTGGCTTTCTTGAGTTAGACGAAGAAAGAGCGGCCGTAGAGGACGCCGCACTTCGTGAACAAATCGAACATTATAATCAGACTGTGCGGGAATATCAAGACAAGCGGCGTGCTTATAGGGAACATGGGGATGAGCTCAGAGCTCACGCGCATGCTCACGCCCCCCGCTGTCACCAGTCGCGACAACCTCCCCATGCCGGTCACCCCACACATCCTCACCCTGCACACCCCGTACACATCAAGTCACATTCGCAAGGGGCTCTCATTTCATAA
Protein Sequence
MHAMSDPALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKGKFESDDLFKRLSRESEVRYTNYRDRPQEERQHRFQAGCREGHTEIAFTTTGTNLQLVFDHSPYNSRGCDFQKESGKVHIVSRFIMNGVCVRWRGWIDLERLDGAGFLELDEERAAVEDAALREQIEHYNQTVREYQDKRRAYREHGDELRAHAHAHAPRCHQSRQPPHAGHPTHPHPAHPVHIKSHSQGALIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00837229;
90% Identity
iTF_01451229; iTF_01452095;
80% Identity
-