Basic Information

Gene Symbol
ZFHX3
Assembly
GCA_948150575.1
Location
OX411256.1:3529808-3536299[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.1 59 4.4 5.2 1 23 84 107 84 107 0.95
2 15 0.0056 0.31 11.6 0.1 1 23 114 137 114 137 0.95
3 15 0.0031 0.17 12.4 2.6 2 21 191 210 191 214 0.91
4 15 0.22 12 6.5 0.6 1 23 226 251 226 251 0.94
5 15 0.011 0.58 10.7 1.3 1 23 269 291 269 291 0.97
6 15 0.00066 0.037 14.5 0.4 2 23 298 320 297 320 0.96
7 15 0.00023 0.013 16.0 3.1 1 23 426 450 426 450 0.92
8 15 0.0094 0.52 10.9 0.7 1 22 470 491 470 494 0.89
9 15 0.00094 0.052 14.0 0.2 1 23 541 565 541 565 0.93
10 15 2.8 1.6e+02 3.1 0.0 3 21 640 658 639 659 0.91
11 15 0.69 38 5.0 3.5 2 19 749 766 748 771 0.91
12 15 2.4e-05 0.0013 19.0 2.9 1 23 1280 1302 1280 1302 0.99
13 15 0.00064 0.035 14.6 0.3 1 23 1388 1410 1388 1410 0.98
14 15 0.006 0.33 11.5 0.4 2 23 1548 1570 1547 1570 0.97
15 15 0.19 11 6.8 1.4 2 22 1797 1817 1796 1820 0.88

Sequence Information

Coding Sequence
ATGTATTTAAGTATATTTGTATATTTTGCTATAATCTTCTTTTGTTTGTCTACAGATCACAAAGAACCAATTGATCAGAAGCCAGAACTGACACACGAACAGAAAATGATGAGATTCCTCGAACAACATCAACAGCAACTTCAGCAACATCAGCAGCAGCAACTTCAGCAACAACAAGCTGAAAGTTTTGCTAAAACTGAAAGAGAAGAGGAACGGGAACGAGAGCGCGAACGTGATACGCCTGGAACACATTCATGTCCCTATTGCAATTTTAGCTGCAATAGCGAAATACGATTGCATGCTCATGTAACGACTACGCATGGTGAATCTAATCGTCATTTCATGTGTCCACTATGCCAAGATGCCTTCAAGGAACGTTCTGCACTAGAGCGACATGTAATGCAAATTCACTCGGTTAACTCCGAAGGTTTGCAACGACTGCTACTATTAGTGGATCAAAGTCATTGGCTAAATGGCAGCAATCAGTCTCAGTCGGAATCGAGACAGCATGACGACGAACGTGAAATTTCATCTCCTAGATCTGAAGGAAGCGCTGATGGTGAAATGGAAAGATGTTCTACGTGTAATCGAACTTTCCGGAATGTTGATGAATTGTGTCAACATCAAAATGACTCTGGTCATCTAGAATTAAAACAAACGCCACAAGGCCCGGGATATGTATGCTGGAAAAAAGGCTGTAACCGCTATTTTGATGCAGCTCACGCACTTCAAAACCATTTTCGTGAGGCTCATGCTCGCAACTCGATAGCTAACATGTCGGTTTCGGAAAAGCATGTATATAAATACCGATGTAATCAATGCAGTCTTGCCTTTAAAACTATTGAAAAACTTCAATTACATTCTCAATATCATGTGATTCGCGATGCAACCAAATGTGTTCTTTGTGGAAGAAGCTTTAGATCTGTATTAGCTCTGCAAAAACATTTAGAGACTTCTCACTCTGAATTATCTGAAGAAGAATTGGCAACTTTCAAGCGTAACCTCGCATCAAATCCATTATTACAATCGGGTCACGGAACTGCTCTTGATGCTGCTACTGCTGAACTTTTACGTAAAGAAACACTGAGAACACCAGAAGACGACTACACAGAATTAGAAGATAGAGATTCCAGTGCAACAGCGGCTGACGAGTCCTGCCACAACGACGCAGAAAATTCAGATGATTCTATTATTTATAAAGATCAACAGTTCCTAGAAGATTATTTGAATTCACAGGCGATGGCAGAAGATTCATACAATGATCCTAATCGAAAATATAAATGTCATCGTTGCAAAGTTGCTTTTACAAGACAATCATACTTAACTGCACATAATAAAACATTACTACATCGCAAAGGTGAGAAACTAACATATCCTATGGAAAAGTATCTTGATCCCAATCGACCATTTAAATGTGATGTTTGTAAAGAATCATTTACACAGAAGAACATTCTTCTAGTTCATTACAACAGTGTTAGTCACTTGCATAAACTAAAACGTGCAATGCAGGAACAACAAAATAATAACAATCCACCTGTCTCACCAGGCGCTGGTTCGGCTCCTTCAAACCTCACGCTAACACCTAAAAGTACATCCAGTGAAGAAGATGACCGAAAGCGGTATAAGTGCAATATATGTAAGGTTGCGTATACTCAAGGTAGCACATTGGATATACACATGAGATCGGTCCTGCATCAAACGCGTGCTGGTAAGCTGCAAGAACTGGCGGCTGCTGGACATGTCGATTTATCACGACCACTTGTGGAACAACCAGACAGGACGGACCCTTCAAAAATCTTACAAGACGTATTGTCGCCGAAAAATACATCCCCATCGTCTACGAGCAGCGGGGGTCCGCGCTCTTCACCCCCCGCTCGTCCCGGTAGCCCACGATCCCCTCGCGCAGGTAGCGCCGCATGCGATCGTTGCCACGCGTCATTCCCGTCTGGGGAACTACTAGACGCACATCGCGCGACATCGTGCCCGTTCAGCGATGCGCCGACGCACTCGCCGCTAGCTGATGCGGAGGCTGCTGCTTTTGACGAGATGGTGGCAAAGGGTAATCCGCCCAAACGAAACTCACAAATGTATAAACAATTATTAGAGACATTCGGATTCGATCTCGTCATGCAGTACAATGAAAATCAACGTCGCAAAATGCAAGAAGAACGCGAAATGGCGAGAGCGCCCAGTCCGCCGCCTCCTCCACCAGAAGAAAAGCCTCCCGATGGCGAAAGCAAGTCTACGTGCCAACATTGTAATAAGGAGTTTTCGAGTGTATTTGTGTTAAAAACGCACTGTGAAGAAGTGCATAAAGATAAAGTGCCGTTAGAGTTTTTAGAACAGTTTGCGGAACAATTCAAATCAGAATATGAGAGAAAATCGGGTGCTCCAAACTCCCCGCGGGCAGCTTCCCCTGCGCCCCAGAGTGAACGTTCGTCATCACCACGTGCAGACGGAGCCGGTAGTGGTAATTGTGAGACACCGAACGGAAATGGAGAAGCCCAAGCCGGGGCGCTATTGGCAGCTCAAGTTCAGGAAATGCAAGCAGCGCTTAATATGCTTCAGCTGCAACAACAACTTGGGCAATTGCATCCGATGGTAGCACAGATGCTATCGTTAGGGCTCCCACTCGGTCTAAATATGGGTGCATTAGCTGCTATGAATCTACAACCACCGCTGGTGCCACTGATGTTACCGCCTCCACCATTCGATTCAATGCCTTTTGGTGGTCATGATGCACAAATTAAGCAACAACAACTATTACAACAACAGCAACAGGCTAATGCCGCAGCGGGAACAAAACGAGCTCGGACTCGAATAACTGATGATCAATTAAAAATTTTACGAGCACACTTTGACATCAATAACTCTCCCAGTGACGAAGCTATTGCAAAAATGGCGAAACAATCTGGTTTAGCGACCAAAGTTATTAAGCATTGGTTCCGTAATACACTATTTAAAGAACGACAACGCAATAAAGATTCACCATACAACTTTAATAATCCACCATCAACAACACTAAATTTGGAAGAATATGAGAAGACTGGCGAAGCAAAAGTCACACCACTAGACTCGTCCGCCAGTTCAGATGAAGGCAAACCACCACCTGAAAAGAAACTTAAAATTGAAGACGACTTATCACTCAATAGTCAACATGAAATCAAATCAGAACCTAACGATGAGCCGACTATGGAAGATAAATACTTATCCTATGACGATCGCCACCAAGAAGACAAGAGCTTCATATTCCCTCAAGCTCCAGCTCATAGTCCGATTTCTACGATTGGAAACCCAGACCACCATATGAATATTTCCAGACCATCAACACCAACACATTTATCACTAAATTCGCTAATACAATCTCAGTTGGATTCTATACCAGCGACAAGTATTCCGCAACCACATCCATCAATGTTGCCACCGAAATTAAATCCTAATTTCACGTCCCCAAACTCCGCGCCCCCGAACGTCCTACCTTTGACCCCAAATCGGAGCCTAAGTCCTGGGAGAGGACCGGCCGATTTCGGACTTTCCGGGGGCAACTCGAACGGATCCAACAGCTCGGGGTCTTCTGGCAAACGCGCCAACAGAACTAGATTTACAGATTATCAAATTAAAGTATTACAAGAATTCTTTGAAAATAATGCTTATCCTAAAGATGATGATCTCGAATATCTATCTAAATTACTCGGACTCAGTCCTAGAGTAATAGTTGTTTGGTTCCAAAATGCACGTCAAAAAGCCAGAAAAGTTTATGAAAATCAGCCAGCTGCCGAACCACCTACTGGAGCTACGGATGATGCCAACAGATTTCAACGTACACCAGGTCTGAACTATCAATGTAAGAAATGTCAGCTTGTTTTTCAAAGATATTATGAATTAATAAGACATCAAAAAACTCACTGTTTTAAGGAAGAAGATGCTAAGAGGTCAGCACAAGCACAAGCTGCAGCTGCCCAAGTTGCGGCGACTTTAAGTAGCGAAGATTCAAATTCGAGCACAGTGGACCACCATGGTCCTCACGTGGCCGTATCACCAGCACCACCACGAACTCCTACACCAGCCGCCCCAAATTATCCTGTCTCACCGGCACCTACAACACCTCATACTCCAGTTACGCCTTTAACACATGTACCGCGTGAAGAAAAAGATGGAAGTTTTCAATGTGATAAATGCAACTTAGTCTTTCCACGTTTTGATCTTTGGCGTGAACATCAATTAGTTCATATCATGAATCCAAATCTTTTTCCTACGTATCCCCCAGATTCCCCTTTTGGGATCTTACAACAACATGCTCAGTTACAACAACTCAACGCCAGTCTTGGTGGTGATGAAGCGCGACACCCTTTAGTCGCAGCGCTGAATCAACAAGCAGCAAAAAGAAAGTTTGATGAGTATGAAGAGATCGATACGGGGGAGCAACCAAAAGACAAACGCCTAAGAACAACTATTTTGCCGGAACAACTTGATTACCTCTATCAGAAATATCAAATAGAGTCAAATCCATCTCGTAAAATGTTGGAAAATATAGCACGCGAAGTTGGTTTAAAAAAACGAGTTGTTCAAGTGTGGTTTCAAAATACGAGAGCACGTGAAAGAAAAGGACAATTTCGTGCTCATGCACAAGTTATAAATAAACGCTGTCCATTCTGTCCAGCATTATTTAAAGTAAAAAGTGCACTTGAGAGCCATTTAAGCACAAAACATGCAGACCAATGTGCACGAGGTGAAATCAATGTAGATGCGTTACCCGATGAAGAATTAAGTACTGAGTCAACTCCAAGTTTTGGATCCCAACAAAGTGACAGGCAGCAAAATTTTTCGCAAACGGGGGCCCCTATGTTGCCCCCTATATTCCCCCCTTTTCATTCGGACATGGAGAAGTTTATTAAGCAATATAGCGAAGAATCTATGAAACGCTACGTCAGTGAGCTTCAAGCTCATGCTGTCGCTCAACAAAACGGCAATAGCGACCAAAACGATAGAAGACCCGAAGGCGGCAAAACAGAAATTCCTCTAGATCTGAGTAAACCTGTGGACCTTTCGCGACCTGGATCTGATGCCGATGAACGATCAGACACTGCCTCCGAAACGATGGAATTTTACGAAGAAGATGAACCTAGTTCACCAATTCCTGGACAACAAAACCAACGACCTCAAGGAAAAAGATTCCGAACCCAAATGTCTTCACTCCAAGTTAAAATAATGAAATCGTTGTTTAATGACTATAAAACCCCAACTATGGCGGAATGTGAAGCTCTTGGGCGAGAAATCGGTTTACCGAAAAGAGTTGTTCAAGTGTGGTTCCAAAACGCGCGTGCCAAAGAGAAAAAGGCACGATTAGCAGCTGGGTTGACGGAAATATCTGATGCAGCACCACCAGATGAGTGTCGTGTATGTGACTTCAAATATAGTCATAAATATTCTGTGCAAGATCATGTGTTCACACGTGGCCACATCGCGACCGTCAGAGCCAGACTAGAAAGTAGTGCCATGACGGGGGATGAAGGCACACTCGCTCTGATGCAGATGGCGGCACGACTGGAGAGCAGCGGCCTCGGCGCTAGTGGGGAGCTCCACAACGCGTTTCTGCGGCCACAACTCGCTGGAAATGGTGAGTGTACGACTTGA
Protein Sequence
MYLSIFVYFAIIFFCLSTDHKEPIDQKPELTHEQKMMRFLEQHQQQLQQHQQQQLQQQQAESFAKTEREEERERERERDTPGTHSCPYCNFSCNSEIRLHAHVTTTHGESNRHFMCPLCQDAFKERSALERHVMQIHSVNSEGLQRLLLLVDQSHWLNGSNQSQSESRQHDDEREISSPRSEGSADGEMERCSTCNRTFRNVDELCQHQNDSGHLELKQTPQGPGYVCWKKGCNRYFDAAHALQNHFREAHARNSIANMSVSEKHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRDATKCVLCGRSFRSVLALQKHLETSHSELSEEELATFKRNLASNPLLQSGHGTALDAATAELLRKETLRTPEDDYTELEDRDSSATAADESCHNDAENSDDSIIYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLTYPMEKYLDPNRPFKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNPPVSPGAGSAPSNLTLTPKSTSSEEDDRKRYKCNICKVAYTQGSTLDIHMRSVLHQTRAGKLQELAAAGHVDLSRPLVEQPDRTDPSKILQDVLSPKNTSPSSTSSGGPRSSPPARPGSPRSPRAGSAACDRCHASFPSGELLDAHRATSCPFSDAPTHSPLADAEAAAFDEMVAKGNPPKRNSQMYKQLLETFGFDLVMQYNENQRRKMQEEREMARAPSPPPPPPEEKPPDGESKSTCQHCNKEFSSVFVLKTHCEEVHKDKVPLEFLEQFAEQFKSEYERKSGAPNSPRAASPAPQSERSSSPRADGAGSGNCETPNGNGEAQAGALLAAQVQEMQAALNMLQLQQQLGQLHPMVAQMLSLGLPLGLNMGALAAMNLQPPLVPLMLPPPPFDSMPFGGHDAQIKQQQLLQQQQQANAAAGTKRARTRITDDQLKILRAHFDINNSPSDEAIAKMAKQSGLATKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVTPLDSSASSDEGKPPPEKKLKIEDDLSLNSQHEIKSEPNDEPTMEDKYLSYDDRHQEDKSFIFPQAPAHSPISTIGNPDHHMNISRPSTPTHLSLNSLIQSQLDSIPATSIPQPHPSMLPPKLNPNFTSPNSAPPNVLPLTPNRSLSPGRGPADFGLSGGNSNGSNSSGSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIVVWFQNARQKARKVYENQPAAEPPTGATDDANRFQRTPGLNYQCKKCQLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQVAATLSSEDSNSSTVDHHGPHVAVSPAPPRTPTPAAPNYPVSPAPTTPHTPVTPLTHVPREEKDGSFQCDKCNLVFPRFDLWREHQLVHIMNPNLFPTYPPDSPFGILQQHAQLQQLNASLGGDEARHPLVAALNQQAAKRKFDEYEEIDTGEQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLSTKHADQCARGEINVDALPDEELSTESTPSFGSQQSDRQQNFSQTGAPMLPPIFPPFHSDMEKFIKQYSEESMKRYVSELQAHAVAQQNGNSDQNDRRPEGGKTEIPLDLSKPVDLSRPGSDADERSDTASETMEFYEEDEPSSPIPGQQNQRPQGKRFRTQMSSLQVKIMKSLFNDYKTPTMAECEALGREIGLPKRVVQVWFQNARAKEKKARLAAGLTEISDAAPPDECRVCDFKYSHKYSVQDHVFTRGHIATVRARLESSAMTGDEGTLALMQMAARLESSGLGASGELHNAFLRPQLAGNGECTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01452650;
90% Identity
iTF_01451293;
80% Identity
iTF_01451293;