Basic Information

Gene Symbol
Baz2b
Assembly
GCA_948150575.1
Location
OX411271.1:2079050-2136304[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-09 2.8e-06 26.9 0.0 5 74 682 754 679 757 0.87

Sequence Information

Coding Sequence
ATGGACAAGGAGAATGGCGATGGCAGTGAAGCCGGGAAGCCTCCTGCCGATGGCCTCCTCGACGCAGCTGGATTATTTGGTGCATATTGGGGTCGAGATGGATCAAGTTCGAGCGCGGCACAAGCGCAAGCACAAGCGCAGGCGCAGGCGGCGATGTTTGGATTTGGTTCAAGATACCCGGCACCATCCACTCTTGGGGTTGCGGCGAATCAGGCTGCACAACTTGGAATACATCCGGCTGCTAGCGCAGCATGGTGGTCGATGGCGTCCCATCTTGCGGCACAAGATTACCTCGCGAGAATTCAGGCTTCAGGATTGAATTTCTCACCAATGGGTGATCCGTACTCAGCACTTTCGGCCTTATCGGCTGGTATGAATATGAAACAACCTCCGAAACAAAATAAATCTAGTAAAAGTAATGATAGATCTGGCCGCAGCAACTCGTCTTCCAGTAGTAAGGAGAAAAGTCAATCCATCAATAGCTCCTCATCACAACCTAGTATTAGATCACAATATGGATTCCCGAAGACTTCTTCTCCGTCAATGATGCATTCTCAGATGTCCAGTCTTGCTTCTTTAAACAGTTTGGTTGCACATCCACATCAGTCAAGTAAATCTAGTAGTAAAACATCAGCACCTTCGCAATCGAGAAAACCATCTTCAAGCATGTCCTCATCGAAGAGTTCCATGAAGGAGCGTGATTTAGCATTGTTACGAGGTGACCTGATGCTGGCTCAGGCTGCAGCCCAGGGGGCATATCATGCCGCCGTTGCTGCAGCGCAAAAGGGAAAAAACATATCATCTTTATATCCTTTTGGAATGGGCGGTTCTGATAAAGATCGTCATGGCATCGATTCGCTTACTGGATTACCACATAATTTGTTAAGCGCTGCTTTGGAAGGGGGTGATCCATCATCAGTCTTGGGCGGAGTAAGACTGCCTCCCGATACTGAGATTATTAAGTACACATCCTCGCTGGCTGGTCCCAAGGCACCACCCGGTACAACAAATCGTGGTCGTAAGAAAACGATATCGCTAGATCCGCCTCAAGTATCCGTGCACCCTTCTTCCTCAGACAGATCGACACCTGTACCTAGTAAAAGACAAAAAATTGATGACCAGTCCAGATCGTCTGTGGAGGTGATCAGATTACCCAATAGAAGCGAAAGATCTCATTCGACGACCACACCACCACTGCCTAATCTCACGGATTATTCCGGTATATCACGTGAATTATTACAGTCAATAGCTAGTCAGAGCGGACTCAGTTTCGACATGCTCGAGAGACAAATGATGCCTTCAGGCATGGGCTTGGCATGCACTTGTTCATCGTCAGAATCTACTTTTGGCTTCGGAAAGGCATATGACGAGAAGACAGCTATAAGAAACTCGTCAATTATAGCGGAGGTGACTGCAGATTTCTTTTGCGATGGCAATTGTTTCCGTTCATATACCGCGGCCCTAGAGCGGCCGTGGTCTAGCGAACTGAGCAATCTCGTCAGTTCGAAGAGCGCTGATGATTCACCATTGGATTTGGGCGTGAAGCAGTCGATGGATGAAGATGGTCCTCTTAATTTATCCCTGAAGCCAACACCAGCCATTCAAGCGTCAGACGCTTTATCTCGATTGACGTCTTTAAGCAGTTCACTTAACGCTGGTTCTTCTGCGGAAAGAATATCTCGTCGAAAACCTGGCGCGAAACCTAGACGCGTTCTCCCCGAGTTAAATACACATATAGCTGAGTCGCCACGGCCTAAGTCAAGTGGAAGTGAAGATAGTGAATGTTGGCCTACCCGTGAAGGCAGACCGCGTAATCTCGGCCGTGGTGTAAGCAAGCCCAAGAAGAACACAGTCGCTTCGTTACTTGCTCAGAGCCGTGCGCTTGGATTGAGACCTGCGCTTGCGCAACAATTATTGGCCGAAACTGATATGGAAAAAATTAAGGCGTTGTTAGGTGAGACTGGCAGTACGGACTCCGAGTGTCCATCGGATAGCTGCCCATCAGATTCGGATACCAGCGACTGTAGTAGACAGCAACTTGATGCACAATTGAGACTGCCTATCGCTTTAGGTTGGCGTAGAGTCACTCTTATAAAAGGTTTATCGCGCAACTGTAGTATTAAGGGCGATGTTACGTACACACCGCCCGAACCACATTCCTCGATCAAGTTGAAGTCGCAACATGAAATCACTGGGTTTCTGGATCAGAACCCGTGCCCGCCGTTAACGCGCGACAACTTCAGTTTCTCGTCCAGACTCATTTTGGGCGACTACGTTCAGACTGCTCCCGAATTGGGTGAACCAATAACTATGGGGGAAGTTGAAATCACCAAAAGGTTGGATGAAGCCCGAGCCTTATCAGCGTTAACCGGTCCCCGACCTACCCCACCGCCCGTTGACAGACGCATTGAGTTAGCACGTCGACAGCAAGCCGCTAGGGATGCTAGACGAGATGCAAATGCCAGATCTAGAGATCAGACGAGATTCGTGAAAGATTATGAAAGAGCTGAAATGGCAAAGAAAGAAAAGGAGGCTAGGAGTCTACAGTTGTTTGAGAATATCAACAATCGCACCCAGTTGACGATCGAACCACTCCCAACGAGCTATGATAAAGAATTATGGAAAATTCCAGAAATAACAATGGGCCCGGCAATTAAAACACACAAAGAACGCAATATACCCCCAATTAGTTTGACATTGATACCAGTCAATCCTAAAAAAGAGATAAAAACATGGAATTTCGATGAGTACAGTGCTCTTGACAAAATGAAAGATTTTGCTGAGAAAGCAGCCTTCGATTTGCCAACGAAGAAAGATAAATATCATTTCAATTTTACACTCATTAAAGCAAACGCTAACAACCAAACGGATAGCGATCAAATGAAACAATTATTCGAATCGTATTCTAGAATTAACGAATTCATAAAAGGCTGCGATTGGACGGATTTGAAAATAGAATCCAAACGGCCGAAGGAAATCGAGCTCAAATATTTGGAAGCAAAAAAGGAATTCATGATTCGAAATTTAAATTTAATAGCCAAAGAGCAGAAGACCGTTTTGAAAGAGCCAATAGAATTTGAGAATAAAATTTTGGGTGATATTATTGGTAAAAGAGATAAGGGCGTGCACACATATAAAATTGGTAGAGATGGAGCTTTATCAATTTCAGTACATCCAAAGGGCAGTTCAAAGGATGGCCTGGCTAAAAGAAAGAAGCAAGAAGAAACTGAGAAGCAGAAAATAGAAGATCAAATTAAGAGACAGCAGGAAAGAGAAATTAAACGTCATCAAGCCCTGCTTCTCAAAGAGCAGCAGAAATATATAACTGAGGAACGTGAGAGGAGACGTCAACACACGACATTCATCCGCCAATTAGATTCTAGAAGAAGATGGGAAGAGAGGGAGAGGAAAAAGCATCAGAATCTTCTGGATAGACTTTTGGCTAAAGAAAAGAAGTTACAATTGAGAAGAAAAGAGATGGAACTACTATCCGAGTTAAGAAGACCGCAAGAAGACTCGACATTATCAGATCAAAAGAACCTGCCTTCCCTAAACAGGATTCCTGGCTTGAAGTTACCAGGTCAAGCTATGGCAGACATATTACAAGTGTTTGAATTCATACATAATTTTGGACAGACTCTTGGTTTTGATTTAGAATCTATACCAACGTTAAACACGTTTCAACTAGCTCTTCTATCAGATTGCTGCGTCGAAGCAGAGGAGGAGTTAATGCAAGTTTTGACCCAATTACTCGTTTGTGCTATTGAGGATCCAGGAATACCACACCCTGGTCGTCACACCACATTGCTGGGTCACGCGATACGAATGGGTGATATAACCCCGGCGAATATCAGCGAAGTATTAAGAATATATCTTTATGCAAACGCTACTGGCGAAGTTAAAGCTTTGACTGGTCTAACGGCGGAGAGGGAACGCGAAAGACGCGTGGCAGACCATCATCAAAGTGACGCAGAAATGTCTGTGACAGGAACAAACGCTAAAAACTTGGCTTATTATGAACATTTGCATGCGAACAGTACCTATAAATTATCAGAAATGCTCCGTGACAAACCGTTCTTAGCTTTGAACGCGACCGCCAAAGCGAAAGTGTTAGCGTTCCTCTGCAATGAATTGTTACAAAATAAATCTGTACTGAGGCAAATCGATGCATCATTGGATCATTTGAATCAATTGAAGAAGGAACGGTATCTCCTAGATATGAAGATAAGAAAAGTGAGAGTCCTTCATCAGAGGAAAGTGCGCACGGAGCAGAGTGAAAAGCAGCAGGCGCTCGCATTGGAACGGATGCAGCGTCTAGTCGAAGAGAGTAATATTATCCAAAATAATAATGAACAAATACAAGAAAATGAACGAATGAAGACACCCCAACCACCTGAAACGAACGAGACACCCAAAGAACAAAGCTGTACAGAAGTGACAGACGCTTCAGACATAGCACCGTCTCCTTACAAAGAACCACAAGAGAAGGACGAGAGTGACAAGGAATTGTCGCCCTTAAAGGAAGATCCCAACTCTATGAAGAGTAAAGAAGCACTGAACAACAATAAGGAGGAGTGTTCTCCGGCAGATCATTCCAAATTAGACAAGGATAGTGTTATGGGTGATGAAGTCTTAAGTGACTTGGAAAGTGAAGGAACACAACCTGAGGAGGACGAAGACAAAAATCTCACATCGGAGGAGCTATCTCGGAAATTAGAAAAACTCATAAGGCAATCGGAGCAGCAGTTGCAACAGTTAGCGGCTGGATCGCATGCGCTTAGAGCTACGTGTTATGGGCAGGATAGATACTGGCGACGCTATTGGTCTCTCGGCAAGTGCGGTGGGATATTCGTGGAAGCCATGGAGTCGTCGCAACCGGAAATAATGAATTATCATCAACAATTGGAACTGCAAGCACAGCAAAAGGAAAAGAGAGACCCCGATATTAAAAAACGAAGGCCAAAGGAGAAAAAAGAATCTCCTACTCCAGAGGAAGAAGCACAAGATGTAGATATGGAAACACAAAAATATGCTGATCAACTTAAATCAGAATTAGAATTAAAAAATATAAAATCCGAGTTGAATTTAAGTGATCATACCCAAATAATAAAATATGAACCTAACTTAAGACACGGAACTTCTAAAGTAGAAGGCTCGTCAATAAAAATGGAAGAGAAATATATACAGCAGAAGCAGAATAAAGAAGAAGAGGACATGCTAGATATAGAAGATTCAATACCTACAGCGTTTTTAGTTCAAAAGCCAACTCACACGCCGATGTACGCGACACAAGCAGAGAGTCTGGATAAACCGCAGGAAATAGTTAAAGTTGAAAATGTTGTTAAGACTGAAACTGTTGAACCTAAGGTCGAGGAGGACGAGAATCTTATAAATAATTTAGACGAGCTCCGTAAAATGGCAGAAGCGGTTTCCTCACAATTAGACGCAGCTAAGAAAGCAGAATCCGAGATGAAAGAAGAGAAGGAAAAGCCCGAACCTCAGGTCGAGATAAAAACTGAAATAATGGAGCCGGAAGCTGCGCTCGCGTATTTGCAAACGAAAATATTGGAAGGCAAATGGTTCTCAATCTTGCTCAAAGAAAACTCTTTCCTTACAAACGTATTGGAGGAAGAGAAAGCTTCGTACGTGAAAAACGAATTGACTTGTTCGGAGATCGTTATGGGACAGGGACACAAATGGGACGTGTCCAATAACCTCCATTTGTTGAATGATCCGAGTTTGTTCACGCTGAACAGTATGGTGACATGTGTTCCGGTGCCCACTAACAATATTTATGCTGACTCCAGTTTGACCACGTCCGGGCTCAACCAAGACATGATAGATGCGACTTTCTGTCAAAATTTTATGAAGGAAGAACCAACGGAAACAGAAGAAGATAAAGAAGACAACGATCTAGAAAAAGAACTGCAAGCAGACGCGTTGAAGATCGAGGCGCAGGGGCAGCAGAAAGCTAAAAATAACCTGACCACTTTGGGTTTATTAAATTTTAACGCCCTATCGACTTATGTCACCTGCGACAGTCCGCCTCCACTGCAAATGACGGCTGATGAAATAGAACAATTAGAACATTGCAAAATACACGGATTACCAAAAAAGATTAAAGGGAATTTCGTCCATAGGGAGCTTAGACACGGTTGGTGGCGTATAACTGAAGCTGATCAACTGAAGGATCTGATGGAAGCTCTCCATCCGCGAGGAGTGCGTGAACGTGAGCTGCATAGCGCTTTTATGCAGCACATACCTTCTGTTAACAATAAGTTATATATAGAAAAAGGAGATATTTTGAGCACTGATCTGTCGATATCGCACTTGGATCGTGTCATTGCGCAGAATGGTGGATTTCCCAGTCCCGATTCGTCCGATTCGTTCAGTGTCAAAACTGCGAGACGAATCGATAACATCGTTTTGGAAATGGTCGAACAACTAGAAGAGAGAGTAGCAGCTGCGAGTATGCAAGTGAAGGGTTGGAGGCCGAATCGGAGTCCGTTGTCGGAAAACGCTAGAGGCGCCGAACTCGTGGCGAGAGCTAAACATAAGCTGGCAGCTGTCGAAGCCCACATAGAAAGACGCTATCTGAAACCACCTTTGGTTCATACAACAACTGAAGCGCAGGTCGGTGCCGCATTACAAGGGGAAACGCATGTCAATACGGGGAACTCGCCGCAAAATTCTGACACCGTTGTCGATGGAAAAGAAAATAAAGGCATATCTCGTGGTCTGAGTACATGGAGGGACGCTGTTGCGAGATGCAACACGTCAGCGCAACTAGCGATGGCGGTGCAAGCGCTTGAAGCGGCCGTAGCTTGGGATAAAAGCATTATGAAAGCGAATTGTCAATTTTGTCTGTCCGGTGATAATGAGGATCAGTTGTTACTCTGCGACGGTTGCGACAAGGGTTACCACACTTATTGCTTCAAACCACGAATGGATAAGATACCAGAAGGAGATTGGTATTGTTGGGAGTGCGTGAACAAAGCGCGCGGTGATCGTGTGTGTATCGTATGCGGTGGTCAGGCTGGTGCCCGTGGGAGGACTATACCGTGTACTCTGTGCGCGCGCGCATACCATCAGGATTGTCACTATCCACCTTTGCCTAAGAATCCACGTGGCAAATGGTATTGTTCTTATTGTATATCGAAGGCGCCTCCGAAGAAGCCACGAAACACTAAGAAGAGAGACAAGCATAGAGATCTTAACGCTTCACTTGATCTGCTGGATTCTCAAATGGTGCCTAGTCCGGCACCATCTCACGCGTCGACTTCGACTACCGCCGACGACAGCACATCAATGCACCAAACGCCCGAGAAGGTTCCAGAAGTGTGCGAGAGGGACGAGGGGATCCTGGACCCGGAAAATGGTATTTTGCATCTCAACATCAAAAACGACATCCCACCAGTACCGGAGGAAGAAGAGGAGAAACGTCCACCTGCACCATATGTTGCTGGAAATGGATCCATACATGGTGACCAGTACAATATTGACAACCAAGACATGGACACGGAAAATGTGCCCTTATTACCACGGCAGAAGAAGGACAAGAGCTCAGCAAAGAAAACAGTCAAAGAGTTGCAGTCGTGCAAAAATCTCCTATTGGAGATGGAATGTCACGAGCACGCGTGGCCATTCCTGGTGCCAGTCAACACAAAACAATTCCCACAGTACAAGAAAGTAATAAAAGCACCGATGGATTTGTCTACAATAAAGAAAAAAATACAAGAGAGCAGCTACAAATGCCGTGACGAATTCGCAACGGACGTCAGGTTAATGTTTAGTAACTGCGAGATATTTAACGAGGACGACAGCCCAGTCGGCCGAGCCGGTCACTGCATGCGACAGTTCTTCGAGCAAAAGTGGACACAAATATGA
Protein Sequence
MDKENGDGSEAGKPPADGLLDAAGLFGAYWGRDGSSSSAAQAQAQAQAQAAMFGFGSRYPAPSTLGVAANQAAQLGIHPAASAAWWSMASHLAAQDYLARIQASGLNFSPMGDPYSALSALSAGMNMKQPPKQNKSSKSNDRSGRSNSSSSSKEKSQSINSSSSQPSIRSQYGFPKTSSPSMMHSQMSSLASLNSLVAHPHQSSKSSSKTSAPSQSRKPSSSMSSSKSSMKERDLALLRGDLMLAQAAAQGAYHAAVAAAQKGKNISSLYPFGMGGSDKDRHGIDSLTGLPHNLLSAALEGGDPSSVLGGVRLPPDTEIIKYTSSLAGPKAPPGTTNRGRKKTISLDPPQVSVHPSSSDRSTPVPSKRQKIDDQSRSSVEVIRLPNRSERSHSTTTPPLPNLTDYSGISRELLQSIASQSGLSFDMLERQMMPSGMGLACTCSSSESTFGFGKAYDEKTAIRNSSIIAEVTADFFCDGNCFRSYTAALERPWSSELSNLVSSKSADDSPLDLGVKQSMDEDGPLNLSLKPTPAIQASDALSRLTSLSSSLNAGSSAERISRRKPGAKPRRVLPELNTHIAESPRPKSSGSEDSECWPTREGRPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAQQLLAETDMEKIKALLGETGSTDSECPSDSCPSDSDTSDCSRQQLDAQLRLPIALGWRRVTLIKGLSRNCSIKGDVTYTPPEPHSSIKLKSQHEITGFLDQNPCPPLTRDNFSFSSRLILGDYVQTAPELGEPITMGEVEITKRLDEARALSALTGPRPTPPPVDRRIELARRQQAARDARRDANARSRDQTRFVKDYERAEMAKKEKEARSLQLFENINNRTQLTIEPLPTSYDKELWKIPEITMGPAIKTHKERNIPPISLTLIPVNPKKEIKTWNFDEYSALDKMKDFAEKAAFDLPTKKDKYHFNFTLIKANANNQTDSDQMKQLFESYSRINEFIKGCDWTDLKIESKRPKEIELKYLEAKKEFMIRNLNLIAKEQKTVLKEPIEFENKILGDIIGKRDKGVHTYKIGRDGALSISVHPKGSSKDGLAKRKKQEETEKQKIEDQIKRQQEREIKRHQALLLKEQQKYITEERERRRQHTTFIRQLDSRRRWEERERKKHQNLLDRLLAKEKKLQLRRKEMELLSELRRPQEDSTLSDQKNLPSLNRIPGLKLPGQAMADILQVFEFIHNFGQTLGFDLESIPTLNTFQLALLSDCCVEAEEELMQVLTQLLVCAIEDPGIPHPGRHTTLLGHAIRMGDITPANISEVLRIYLYANATGEVKALTGLTAERERERRVADHHQSDAEMSVTGTNAKNLAYYEHLHANSTYKLSEMLRDKPFLALNATAKAKVLAFLCNELLQNKSVLRQIDASLDHLNQLKKERYLLDMKIRKVRVLHQRKVRTEQSEKQQALALERMQRLVEESNIIQNNNEQIQENERMKTPQPPETNETPKEQSCTEVTDASDIAPSPYKEPQEKDESDKELSPLKEDPNSMKSKEALNNNKEECSPADHSKLDKDSVMGDEVLSDLESEGTQPEEDEDKNLTSEELSRKLEKLIRQSEQQLQQLAAGSHALRATCYGQDRYWRRYWSLGKCGGIFVEAMESSQPEIMNYHQQLELQAQQKEKRDPDIKKRRPKEKKESPTPEEEAQDVDMETQKYADQLKSELELKNIKSELNLSDHTQIIKYEPNLRHGTSKVEGSSIKMEEKYIQQKQNKEEEDMLDIEDSIPTAFLVQKPTHTPMYATQAESLDKPQEIVKVENVVKTETVEPKVEEDENLINNLDELRKMAEAVSSQLDAAKKAESEMKEEKEKPEPQVEIKTEIMEPEAALAYLQTKILEGKWFSILLKENSFLTNVLEEEKASYVKNELTCSEIVMGQGHKWDVSNNLHLLNDPSLFTLNSMVTCVPVPTNNIYADSSLTTSGLNQDMIDATFCQNFMKEEPTETEEDKEDNDLEKELQADALKIEAQGQQKAKNNLTTLGLLNFNALSTYVTCDSPPPLQMTADEIEQLEHCKIHGLPKKIKGNFVHRELRHGWWRITEADQLKDLMEALHPRGVRERELHSAFMQHIPSVNNKLYIEKGDILSTDLSISHLDRVIAQNGGFPSPDSSDSFSVKTARRIDNIVLEMVEQLEERVAAASMQVKGWRPNRSPLSENARGAELVARAKHKLAAVEAHIERRYLKPPLVHTTTEAQVGAALQGETHVNTGNSPQNSDTVVDGKENKGISRGLSTWRDAVARCNTSAQLAMAVQALEAAVAWDKSIMKANCQFCLSGDNEDQLLLCDGCDKGYHTYCFKPRMDKIPEGDWYCWECVNKARGDRVCIVCGGQAGARGRTIPCTLCARAYHQDCHYPPLPKNPRGKWYCSYCISKAPPKKPRNTKKRDKHRDLNASLDLLDSQMVPSPAPSHASTSTTADDSTSMHQTPEKVPEVCERDEGILDPENGILHLNIKNDIPPVPEEEEEKRPPAPYVAGNGSIHGDQYNIDNQDMDTENVPLLPRQKKDKSSAKKTVKELQSCKNLLLEMECHEHAWPFLVPVNTKQFPQYKKVIKAPMDLSTIKKKIQESSYKCRDEFATDVRLMFSNCEIFNEDDSPVGRAGHCMRQFFEQKWTQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01453292; iTF_01452341;
90% Identity
iTF_01453292;
80% Identity
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