Tpel006193.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- PAXBP1_1
- Assembly
- GCA_948150575.1
- Location
- OX411249.1:1424056-1430075[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-16 5.6e-12 45.8 0.1 3 188 505 671 503 677 0.78 2 2 0.28 2.5e+03 -2.3 0.1 35 69 772 801 752 807 0.62
Sequence Information
- Coding Sequence
- ATGTCCCTATTTCGAAAACCTACGAAAAAGTATCAAAGGCGGGTGTTTGCTTGCAATGATGACGAAGAAGACGCTGATCCTGAACCTCCGCCACCACCTATCATCAGTAAAGAGAAAAAGGAGAAGTCCAAAAAGAATACTTTATTGAGTTTCGCCGATGAGGAGGAAGAGGGTGAAGTATTTAAAGTGAAGAAATCAACACATAGCAAAAGATGGACACGCCGTAAGGAGAAAGATAAACGTAAACCTGACAATGAAAGTAAAGTTGATAATGATCATGATGAGGAACAAGACCGAGATAACGGAGTCACCGAGCAGAAAGAACCACCAAAAAAGAAGACCCTAGAGGGACTAATACTTTCTGGACGTGAAGCCCTCGCTGCAGATGGACTCGGTGACATATCAGATGGTGAGGAAGACGAAGAGACAGCGACAGGATTCCCTCGTTTCCGGCCGGAGTCAGTACGTGCTGCACTAGCAGCTTCCGGAAACATTCCTGATGCTGCACTCATACATGCGGCAAGGAAGACCAGACAGAAGGCTCGTGAAAAAGGCGGCGGTGACTTTATACCAATTCGGACTGAGAATAACGAGAGCGCGAGTTCTCGGTTGATACGTGATGATGGATCTGGTGATGATGATGAAGATGATAGGATCATTGTTAGAGGATTGGAGTTGCCTAGTGATAAACCTACACGTGATGCTGAAGCAATAAGTGAAGAAGAGGTTGACAGCGAGACAGAGCATTGGGAGGAACAACAAATGCAGAAGGCAGTTCCAGCTATTGCAGAACTAGGTTTGGAGAACGGTATGGATATGAATCCATTTGCAATTCCGCCTCCAGCACCTCGTATGGATTCTGGACCTGCTCATCTTCGTCCATTACAGTCTTCTGTCGATGCTGGGACTGTCACTCCAGAAGTATTATTATCTGCAGCCACACAGAGGTTAAAAGAATTAACATTGGCACGGACTAACATGATATCAAAGAAGCAGGAAGTGAATGAGAAGCTCCATGTCGCTTGTCGTACGAGGGACTCTCGACAAAGTAAAGCTGAACCACTGGATAAGGCTTATAGACAGGCACAGGCTGCTAGAGGCTATCTTACCGATTTAGTGGAATGCTTGGATGAAAAGATGCCGGCATTGGAGGCCTTGGAACGGCGTGCGTTGTCTCTCCATCAAAGACATTGCCAATTTATTCAGGAGAGAAGAAGAGCAGATGTCAGGGACCAGGCTCAGGATTTACTATATTTAGCTGCACGACCGGGTTCCACTCGTCCTCCGGACTCTGAAGAGAAGATCCGTCGTACAGCTGAACGTGAGGGTAGACGACGAGCGAGACGACTAAAACGTGAAAGTGCAGGTATCACACAACACAGAGACGGAGATTCCAGTGATGATGAACTACCTCCGGGAGAACGACTGCAATTGACTGCAGAGAGAGAAACTATAAGAAAGGAGGCACAGGCAATGTTCGCAGATGCGTTACCTGCATGGAGGTCCGTCCGTGGTGTTTGTCGCCGTTTATCTCGTTGGAGGAGTACTAATGTTGAGTTGTACCGCACTGCGTATGTCGCTGATTGTTTGCCTAGCTTATTAGCACCTTATGTTAGACACGAGTTATTACTTTGGAATCCTATGTCTGATGAAGATAATGAAGATTACGAGAAAATGAATTGGTATAGATGTGTAATGATGTATGGAATGAAGACGGACGGATCATCTAGTGATTCGGATGAAGCTGAGATGAATGGTGATGAGCGATATGTGCAGACGTTAAATGAGGATTCTTTGAGAGACGACCCTGATCTTATGTTGGTACCGACCCTTATACAGAAGGTATTGGTACCTAAACTTACTGAGTTGGTGGAGTCATCGTGGGACCCTATGTGTGTGCGTGCGTGTGTCCGTTTGCGCGGTGTGCTGGCCCGTGTGTGTGTGATGCCATGCGCACGCGCCTCACTGAGGACACTAAGCGCAGCACTCGCGGAAAGGCTCACTGCAGCAGTCAACAATGATACATTCATACCTGCACTGCCACACCAGTTATGTGAAGGTCCAGGTGGCTCATTTTGGAAAAGATGCGCAGGCGCAGGTGTTCGTCTATTACGTGCCTCGTTAGCTTTATGTTCGCCGCCAATACTGAAAGCCGACACGCAAGTTTTAGCACTTTTAAATGCATTAACCCTGGCGATGGGTGCAGCTCCTCCAGTGTTAGCGGCGGGTGTAGTTCACGCACTATACACGACATTACCGCGGGAATATAGCATTAGAGCTAAAACATTACAACCGCTGGCCACGTTCGCTAAGAAATTGATGCAACAACTTGAAAGTGACAACCCTTTGCATTTGAAAGCTTTGGAGCAGTGTCGCACAGTTTTATCTGAAGCAAAGAATATAAAAATGAGGGAAGATAGCGACTGA
- Protein Sequence
- MSLFRKPTKKYQRRVFACNDDEEDADPEPPPPPIISKEKKEKSKKNTLLSFADEEEEGEVFKVKKSTHSKRWTRRKEKDKRKPDNESKVDNDHDEEQDRDNGVTEQKEPPKKKTLEGLILSGREALAADGLGDISDGEEDEETATGFPRFRPESVRAALAASGNIPDAALIHAARKTRQKAREKGGGDFIPIRTENNESASSRLIRDDGSGDDDEDDRIIVRGLELPSDKPTRDAEAISEEEVDSETEHWEEQQMQKAVPAIAELGLENGMDMNPFAIPPPAPRMDSGPAHLRPLQSSVDAGTVTPEVLLSAATQRLKELTLARTNMISKKQEVNEKLHVACRTRDSRQSKAEPLDKAYRQAQAARGYLTDLVECLDEKMPALEALERRALSLHQRHCQFIQERRRADVRDQAQDLLYLAARPGSTRPPDSEEKIRRTAEREGRRRARRLKRESAGITQHRDGDSSDDELPPGERLQLTAERETIRKEAQAMFADALPAWRSVRGVCRRLSRWRSTNVELYRTAYVADCLPSLLAPYVRHELLLWNPMSDEDNEDYEKMNWYRCVMMYGMKTDGSSSDSDEAEMNGDERYVQTLNEDSLRDDPDLMLVPTLIQKVLVPKLTELVESSWDPMCVRACVRLRGVLARVCVMPCARASLRTLSAALAERLTAAVNNDTFIPALPHQLCEGPGGSFWKRCAGAGVRLLRASLALCSPPILKADTQVLALLNALTLAMGAAPPVLAAGVVHALYTTLPREYSIRAKTLQPLATFAKKLMQQLESDNPLHLKALEQCRTVLSEAKNIKMREDSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01453285;
- 90% Identity
- iTF_01453285;
- 80% Identity
- -