Tpel014700.1
Basic Information
- Insect
- Tinea pellionella
- Gene Symbol
- -
- Assembly
- GCA_948150575.1
- Location
- OX411245.1:7653738-7659807[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-08 2e-05 24.2 0.0 1 43 19 61 19 62 0.95 2 2 4.8 3.5e+03 -2.2 0.0 14 22 143 150 138 150 0.76
Sequence Information
- Coding Sequence
- atgcctcgcaagtataaacgaaagccaggtgtggtgccgcgccacatcaactggacagaagatagtttagcacttgcgttcgaagatctaaataaaaaacaaaaaagtatcaacgaaatatcccggatttatggcatatcctctcgaaccttaagaagacggtacgaacagagaaatcaactactggtaacacaaggaaaataccctgtccttggctttgaaaatgaaaaaagactagtatctcatacactaaagctcgcagaggcaggatttcctcctgaaaggagtctaattcgccaattagcctatcagtttgccgaaaaactaggattgaagcacaattttaataatgaaactaaaatggctggaccgcaatggttgaaaagtttccttgaaagaaatcccgaaatagttgtgaggcaagctgagggcttgtcaattcaaagagcgaagggtctaagcagggtcgaagtagccaaattttttgatcttctcataaccgtcttaactgaaaatgatttgctagataagccggacagaattttcaatatggatgaaagcggtgtccaactcaacaataaacctggcaaggtattagccaagaaaggtactagagcagtgaaatcacttacttccggtgaaaaaggcgaaacaattaccgttgttgcttgttgcaacgctatcggcaattttctcccacctgttttgattatcaagggggtaaataaaaagccagaatttgaagaaggacttcctcctgggtccaaagtttatatgcaaaagaaatcggcatatatttcctctgaacttttttacaagtggttgactgaacattttataccacgcaagcctcccggaaaggtattactaattttagatggtcattcatcacattctagtgctgtcaacatgctggaaactgctcgtgacaatgatgtgatactgctttgtttaccTAGTCATACTACTTCTGCTTTACAACCTTTAGACGTATCTGTATTCGGACCCTTTAAAAAATACTATTATGCGGAGACAAACAATTTTATTCGCACCAATCCACAAAAAAAACTGAACCGGTACAATTCTGGTCAACTGATAGCAAGGGCTTGGATTCGAGCAACTACATCTGCTAATGCAATAAGTGGTTTTCGCGGCAGCGGAATCTATCCAGTCAATCCAAATGCACTGTCTGATGCTGAATTTGCTATATCAGATATTGCATTAGGGGAGCTTACGCAGGAACAAGAGTCTGAAACTATAAACGATCAAGTACTAGGTGCTTCTGGAGAACTTGCGTTACGTGCGCGCATTCAGGAATCTGAATATGACCGCGGTAATGTACTAAGTCGACAGAATGAAGTGACTCTACTAGGCGATCAAGTCCCAAGCTACTGTGATAAAAATAATCCAGAAACGATTGTAAATGAAGCTGAGCAGAATAGCGTGAACCAAAGTTGCACGCCACCTAGGCCGTCGTTGAGTCTTTTGGCTCTTTCTCATGAATGTTTAGCCCTTGAAGATGGCGAAATTGAAAATTATATTTTAGATAATACTGAACTATCATTGCCATCGCTGATATCTTTAAATGAGTCACAGAACAAGGATCTACAAAAAGAAACACCGTCGAAATTTTTACATCAATCATCTCCTATACCAAAAATTCCGCTGAGTATGTCTAAAAGGGCTAAACAATCAGCCGAAGTTTTAAACTCGAATGATAAAATAATCGAGAAGAAGAATAAAACTGAGAGAGTAAAGAAAACAATCATAATGAAACAAATGGAAGAAACAAAAACCAATCCAGTTGGTAGCAAAGAAAAGATTACGAAGAAAAGAGAGCGACCACAAAAAAATAAAAAATCAAAACAATATAGAGATGTTACCagcaTGATATTAAAGGTACATATCGTGTTACCTGAAAAGGAATATTTAGTGTTTTGTATTCCAAATACATTCACAGAGGTTGTAGGACATAATGGTGGATAA
- Protein Sequence
- MPRKYKRKPGVVPRHINWTEDSLALAFEDLNKKQKSINEISRIYGISSRTLRRRYEQRNQLLVTQGKYPVLGFENEKRLVSHTLKLAEAGFPPERSLIRQLAYQFAEKLGLKHNFNNETKMAGPQWLKSFLERNPEIVVRQAEGLSIQRAKGLSRVEVAKFFDLLITVLTENDLLDKPDRIFNMDESGVQLNNKPGKVLAKKGTRAVKSLTSGEKGETITVVACCNAIGNFLPPVLIIKGVNKKPEFEEGLPPGSKVYMQKKSAYISSELFYKWLTEHFIPRKPPGKVLLILDGHSSHSSAVNMLETARDNDVILLCLPSHTTSALQPLDVSVFGPFKKYYYAETNNFIRTNPQKKLNRYNSGQLIARAWIRATTSANAISGFRGSGIYPVNPNALSDAEFAISDIALGELTQEQESETINDQVLGASGELALRARIQESEYDRGNVLSRQNEVTLLGDQVPSYCDKNNPETIVNEAEQNSVNQSCTPPRPSLSLLALSHECLALEDGEIENYILDNTELSLPSLISLNESQNKDLQKETPSKFLHQSSPIPKIPLSMSKRAKQSAEVLNSNDKIIEKKNKTERVKKTIIMKQMEETKTNPVGSKEKITKKRERPQKNKKSKQYRDVTSMILKVHIVLPEKEYLVFCIPNTFTEVVGHNGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451396;
- 90% Identity
- iTF_01451399;
- 80% Identity
- -