Tshe050966.1
Basic Information
- Insect
- Timema shepardi
- Gene Symbol
- crm
- Assembly
- GCA_902151425.1
- Location
- CABFVX010008685.1:1-16956[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-09 2.2e-05 26.9 0.0 3 44 136 189 134 191 0.88 2 2 7.8 3.9e+04 -2.7 0.0 23 30 191 198 189 199 0.86
Sequence Information
- Coding Sequence
- ATGGGGATTAAGTTGTTGATTGCAACGTACAGAATGGAGGACATGACATCTATCGTAGTTTGCCCTGCCTGTAATTGTATGGATCCATCCCTGGCAGCCTCTGGTGCAGTAGAGACTCCCAACTTGATCTCAGTAAATTCACCTGATATTCCTGTGGACAAGTGTGAGCAATTGGGATCTGTGACTCACAACCAAGAAACCGATGGGTTGATCACCGGACAGATACGTTCTAGTGCCAGAGTGTACAAGAAGATGAGGTTGGACTCTGGGTCTTTATCAACATCATTAGAAAAGAAAGATCCTAAGGACGACGACGCTAAGGCGGACACCAAAGATAAAATGGAGCATAAAGACAAGGTCGACTGTAAGCAGCCGGAGATCAAACCCAAACCCAACAAGCCTCAGCTCTGGTCGACTGAAGAGAAGAACATATTCTTTGAGGCGCTCAACGAGTACGGCAAAGACTTTGAGTCGATATCAAATTACTTTGCTACCAAGGCCCGCAAGAAAGGGATGCCTGAAAGCATGTCCAAGACTAAGGACCAAGTGCGGCACTTCTACTACAGGGCCTGGCACAAGGTCTCCAAGCACCTCAAGTTTCCCGAGGACCCAGGAATGAAGAAAGCTACCCAGGAGCTGTATAGCCTCATCAACTATGGAGAGATGCGCAGGAAGATTGGTCCAATCACCGAGAAGTTGTGCCTCAAACTGAACGAGCTGGTGTATCGTGGATCTGTCCAGATCCGTCTCAAGGGCAAAACTATCCGGATCAAGACTCCGATGTGTCGGATCCTACGCAAGCTTAACCAGCTGGACGAGAACGAAGAGGAAGTGCGCTTGCCCAATCGTATCTCCATAGAGCTGCGCCCCAAGACCAACACTGCCTGGGGTCGAGTGCAGTCGGTGGCCCAGAACCCCCGGGTGAGGACCAAGCTGCCCTTGCAACGAAGACTCGCCTCACTCCTCACCTTCCTGGAGAACCGCTGGAAACAGAACCACGTACGGCACCGTGAGAAACTAGCTGCCGACATCAGCGCGGCAGACCCAGGACACACAAGGGACCCCGACGTTAAGGAAACCCTCCTCCGTGTGGCCCCGCGGCCTGACGCCTCCATCAGCCTGTCCGCAGTTAACATGTCCGAGTACCTGACCAGCCTCAATCTCTGTCTCAACACATACCAAGAGAGGTTTGGGTTTCAGCCCTTGGATGACCCTTCGTTTGGACGAGACCGTAGCAAACATCTGGCCTGTAGGAAGGCCCTCGCCAAGAAGGCCAAGACTGAACCTGCCGCTGCGCCAGCTAAACCAAAGGAGGCTCCTATTCCTGTCGACACCGAGCAGCCCTCTGGTGTCGACCCCACCACCCCACTGCAGGTGCTTCTCGAGTTCGACAACAACGCCTGCGACAGCGACCCACGGACCTCGGAGGCTATGGACGCTTCTACCATAAGTGCCAACGATATGGCTGTAAATAACATCTTGTCCCTGAAACTCTGCTTAGACGCAGAGTCCCCAGTTACTCCCGAGTTGGTCCTGAAAGAGGAACCTGTCAAGGAAGAACAACCCGCCCCTGCGGAAGCTCCAGGCCCTGACGACGAGGAAACCTTGGCCAAAATCCGAGCGGGCTGGACCAGGCTCACAGCCAAGACCACCACGATTGGTGACCTCTACCTCCTGTTTGGGTTTGACGGGAAACTTCACCTGGACTATTGCTGGGAGGGGGCCCTTTCCCACCCCACCTCGCAGTCTGAGGAGGGGGACCGACTCCAGGGACCTACACCTAACCCCCTGGCTGGAACTCTGCAGCAATTGGTTTCCATAGCTAAGCTCAATGTAACCAAGAATAAGGTCACATGTCCCTGCGGTCACATCTGCGGCGTTCCTAACAAGTCCTCTCCATCTGGCCGCAACAGGATGCCTCCAAGGGCTCGGCCCATCGGGGATAGCGCTGATCGGGCCGGAGGCATCAAGGATGGCGGGGGTGGTCTCCACAACCATGTTCTCTCTCGACCTGTGTCTAGTGATGGAGTGTTTAGGATACCTCTTCTGGCGCCCTCTCAGTTCAAACCCCCGCCCAAACCTGGGACAGCTGAGGCCTTCAAGGCACAACTTGACAAATTCCGACCACGGTTCTGCAATCGCCGCGGTCGTGCTGTGCGCCCTAAGAATGTGGTGGTTCAACGCCAGCTACCGCTACTACCCAAGGCTCCCAATGGCCATGCCATGGTCACTCTTAAAGTCATCCCTCAGACAGGCGAGTTCATGCCTATTGGAGGAGCCACCGGTCTTGTCACGGCCAGCCATTCTTCCGGCGTCGTCTTTCCTTCGGGGGTGATGCCACGACCCCCGGTCAAGTCGCGACACATCCTACCAGCACTACCAGTAGTCACCACCACTCCACCCAATACCAGCCCACTCTTATCGGACACATCACCAGCAGGGGCAGACTTGGCGAAAGAGGACCTGCTCCAGCCCGCGTCCCCTCCCAGCATCTCTCACCTACTGAATCTCCCAGTGGAGGAAGGGGATCACATATCCTTGGTGACCCCCTCCACCAGCCTACTAGATCCCTCCCCACACCGGGGGCCAGACCTTTGCTGTTGCCTGTGCAATCGGAAGGAAATATCGATGTTGTTTCGTTCGGTTCCAGAAGGTTTCCTACCGACGGCGGGAGAGCTTGTTAACTCCACCCCCCCTAGTAGTCCTTCACGGATGTTCAAGGAAGACAGCCAATGGCTAAACTCTGAGGTGGCCGACTTCTCGTTGAGCAGTTTCTTGGGTCACTTGGAGTCTCCTATGAAGCCCTCGACGCTCGTCACCAGTGCTCCTAGTGGTGAAGATACAAGACTTTCTTCTGAT
- Protein Sequence
- MGIKLLIATYRMEDMTSIVVCPACNCMDPSLAASGAVETPNLISVNSPDIPVDKCEQLGSVTHNQETDGLITGQIRSSARVYKKMRLDSGSLSTSLEKKDPKDDDAKADTKDKMEHKDKVDCKQPEIKPKPNKPQLWSTEEKNIFFEALNEYGKDFESISNYFATKARKKGMPESMSKTKDQVRHFYYRAWHKVSKHLKFPEDPGMKKATQELYSLINYGEMRRKIGPITEKLCLKLNELVYRGSVQIRLKGKTIRIKTPMCRILRKLNQLDENEEEVRLPNRISIELRPKTNTAWGRVQSVAQNPRVRTKLPLQRRLASLLTFLENRWKQNHVRHREKLAADISAADPGHTRDPDVKETLLRVAPRPDASISLSAVNMSEYLTSLNLCLNTYQERFGFQPLDDPSFGRDRSKHLACRKALAKKAKTEPAAAPAKPKEAPIPVDTEQPSGVDPTTPLQVLLEFDNNACDSDPRTSEAMDASTISANDMAVNNILSLKLCLDAESPVTPELVLKEEPVKEEQPAPAEAPGPDDEETLAKIRAGWTRLTAKTTTIGDLYLLFGFDGKLHLDYCWEGALSHPTSQSEEGDRLQGPTPNPLAGTLQQLVSIAKLNVTKNKVTCPCGHICGVPNKSSPSGRNRMPPRARPIGDSADRAGGIKDGGGGLHNHVLSRPVSSDGVFRIPLLAPSQFKPPPKPGTAEAFKAQLDKFRPRFCNRRGRAVRPKNVVVQRQLPLLPKAPNGHAMVTLKVIPQTGEFMPIGGATGLVTASHSSGVVFPSGVMPRPPVKSRHILPALPVVTTTPPNTSPLLSDTSPAGADLAKEDLLQPASPPSISHLLNLPVEEGDHISLVTPSTSLLDPSPHRGPDLCCCLCNRKEISMLFRSVPEGFLPTAGELVNSTPPSSPSRMFKEDSQWLNSEVADFSLSSFLGHLESPMKPSTLVTSAPSGEDTRLSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01444723;
- 90% Identity
- iTF_01449571;
- 80% Identity
- -