Tpod049190.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- crm
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000011.1:85675359-85696129[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-09 1.4e-05 26.9 0.0 3 44 162 215 160 216 0.88 2 2 6.7 2.4e+04 -2.7 0.0 23 30 217 224 215 225 0.86
Sequence Information
- Coding Sequence
- ATGGTGTTCGTTTTGTACGTCACTATCTTATCAACTCCCTACCACCATCCAATCCTCAAGGATGACATCCTCTCACTACTTGAGGTCCATCCGGGCGATATAGCTCCCTGTGGTGTGGTGGTCAGTGCACATGGCTGCGAGCCTAggtgtcctggTATGGATCCATCCCTGGCAGCCTCCGGTGTAGTAGAGACTCCCAACTTGATCTCAGTAAATTCACCTGATGTTCCTGTGGACAAGTGTGAGCAATTAGGATCTGTGACTCACAACCAAGAAACCGATGGGTTGATCACCGGACAGATACGTTCTAGTGCCAGAGTATACAAGAAGATGAGGCTGGACTCTGGGTCTTTATCAACAGCATTAGAAAAGAAAGATCCTAAAGACGACGATGTTAAGGCGGATACCAAAGATAAAATAGAGCATAAAGACAAGTCAGACTGTAAGCAGCCCGAGATCAAACCCAAACCCAGCAAGCCTCAGCTCTGGTCGACTGAAGAGAAGAACATATTCTTTGAGGCGCTCAACGAGTACGGCAAAGACTTTGAGTCGATATCAAACTACTTTGCTACCAAGGCCCGTAAGAAAGGGATGCCTGAGAGCATGTCCAAGACTAAGGACCAAGTGCGGCATTTCTACTACAGGGCCTGGCACAAGGTCTCCAAGCACCTCAAGTTTCCTGAGGATCCAGGAATGAAGAAAGCTACCCAGGAGCTGTATAGCCTCATCAACTATGGAGAGATGCGCAGGAAGATTGGTCCAATCACCGAGAAGCTGTGCCTCAAACTGAACGAGCTGGTGTATCGTGGATCCGTACAGATTCGTCTCAAGGGCAAAACTATCCGGATCAAGACTCCGATGTGTCGAATCCTACGCAAGCTTAACCAGCTGGACGAGAACGAAGAGGAAGTGCGCCTGCCCAATCGTATCTCCATAGAGCTGCGCCCCAAGACCAACACCGCCTGGGGTCGAGTGCAGTCAGTGGCCCAGAACCCCAGGGTGAGGACCAAGCTGCCCTTGCAAAGAAGACTCGCCTCACTTCTCACCTTCTTGGAGAACCGCTGGAAACAGAACCATGTACGGCACCGTGAGAAACTAGCTGCTGAGATCAGCGCGGCAGACCCGGGACACGCAGGGGACCCCGACGTTAAGGAAACCCTCCTCCGTGTGGCTCCGCGGCCTGACGCCTCCATCAGCCTGTCCGCAGTTAACATGTCAGAGTACCTGACCAGCCTCAATCTTTGTCTCAACACATACCAAGAGAGGTTTGGGTTTCAGCCCTTGGACGACCCCTCGTTTGGTCGAGACCGCAGCAAACATCTGGCCTGTAGGAAGGCCCTTGCCAAGAAGGCCAAGACTGAACCTGGCACTGCGCCAGGTAAACCAAAGGAGGCCAAGGCAGAACCGGGCGCCGCACCAGTTAAGCCTAAGGAGGCTCCTGTTCCTGTCGACACCGAGCAGCCCTCTGCAGTCTGTCCCACCACCCCACTGCATGTGCTGCTCGAGTTCGACAACAACGCCTGCGATAGCGACCCGCGGACCTCGGAGGCTATGGACGCTTCTACCATTAGCGCCAACGATATGGCTGTAAATAACATCTTGTCCCTGAAACTCTGCTTAGGCTGTGCCCATTGTCACTCCTACTCTCCCGCACTGATCAATATCCGCAGGCTGTCTGGCAAGTGTGCGGCTCCTGATGTTTATGACGCAGAGTCTCCAGTTACTCCTGACTTGGTCCTGAAAGAGGAACCTGTCAAGGAAGAACAACCCGCCCCTGTGGAAGCTCCAGGCCCCGACGACGAGGAAACCTTGGCCAAAATCCGAGCGGGCTGGACCAGGCTCACAGCCAAGACCACCACGATTGGTGACCTTTACCTCCTGTTTGGGTTTGACGGGAAACTTCACCTCGACTATTGCTGGGAGGGAGCCCTTTCCCACCCCACCTCGCAGTCTGAGGAGGGTGACCGCCTACAGGGACCCACACCTAACCCCCTGGCTGGAACTCTGCAGCAATTGGTTTCCATAGCTAAGCTCAACGTAACTAAGAATAAGGTCACATGTCCATGCGGCCACATCTGCGGCGTTCCTAACAAGTCCTCTCCATCTGGCCGCAACAGGATGGCTCCAAGGGCTCGGCCCATTGGGGATAACTCTGATCGGGCCGGAGGCATCAAGGATGGCGGGGGTGGTCTCCACAACCATGTCCTCTCTCGACCCGTGTCTGGTGATGGAGTGTTTAGGATACCTCTTCTAGCGCCCTCTCAGTTCAAACCCCCGCCTAAACCTGGGACTGCCGAGGCCTTCAAGGCACAACTCGACAAATTCCGACCACGGTTTTGCAATCGCCGCGGTCGGGCTGTGCGCCCTAAGAATGTGGTGGTCCAACGTCAGCTGCCGCTACTACCCAAGGCTCCCAATGGCCATGCCATGGTCACTCTTAAGGTCATCCCTCAGACGGGCGAGTTCATGCCTATTGGAGGACCCACCGGTCTCGTCACAGCCAGCCATTCCTCCGGCGTCGTTTTTCCCTCGGGGGTGATGCCACGACCCCCAGTCAAGTCGCGACACATCCTACCAGCACTACCAGTAGTGACCACCCCTCCACCCAATACCAGCCCACTCTTATCGGACACATCACCAGCAGAGGCAGACTTGGCAAAAGAGGAACTGCTCCAGACCACGTCACCTCCCAGCATCTCTCACCTACTGAATCTCCCAGTGGGGGAAGGGGATCACATATCCTTGGGACCCCCTCCACCAGCCTACTAG
- Protein Sequence
- MVFVLYVTILSTPYHHPILKDDILSLLEVHPGDIAPCGVVVSAHGCEPRCPGMDPSLAASGVVETPNLISVNSPDVPVDKCEQLGSVTHNQETDGLITGQIRSSARVYKKMRLDSGSLSTALEKKDPKDDDVKADTKDKIEHKDKSDCKQPEIKPKPSKPQLWSTEEKNIFFEALNEYGKDFESISNYFATKARKKGMPESMSKTKDQVRHFYYRAWHKVSKHLKFPEDPGMKKATQELYSLINYGEMRRKIGPITEKLCLKLNELVYRGSVQIRLKGKTIRIKTPMCRILRKLNQLDENEEEVRLPNRISIELRPKTNTAWGRVQSVAQNPRVRTKLPLQRRLASLLTFLENRWKQNHVRHREKLAAEISAADPGHAGDPDVKETLLRVAPRPDASISLSAVNMSEYLTSLNLCLNTYQERFGFQPLDDPSFGRDRSKHLACRKALAKKAKTEPGTAPGKPKEAKAEPGAAPVKPKEAPVPVDTEQPSAVCPTTPLHVLLEFDNNACDSDPRTSEAMDASTISANDMAVNNILSLKLCLGCAHCHSYSPALINIRRLSGKCAAPDVYDAESPVTPDLVLKEEPVKEEQPAPVEAPGPDDEETLAKIRAGWTRLTAKTTTIGDLYLLFGFDGKLHLDYCWEGALSHPTSQSEEGDRLQGPTPNPLAGTLQQLVSIAKLNVTKNKVTCPCGHICGVPNKSSPSGRNRMAPRARPIGDNSDRAGGIKDGGGGLHNHVLSRPVSGDGVFRIPLLAPSQFKPPPKPGTAEAFKAQLDKFRPRFCNRRGRAVRPKNVVVQRQLPLLPKAPNGHAMVTLKVIPQTGEFMPIGGPTGLVTASHSSGVVFPSGVMPRPPVKSRHILPALPVVTTPPPNTSPLLSDTSPAEADLAKEELLQTTSPPSISHLLNLPVGEGDHISLGPPPPAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01444723;
- 90% Identity
- iTF_01444723; iTF_01447515; iTF_01448511; iTF_01445613; iTF_01450528;
- 80% Identity
- -