Tpod060163.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- pnr
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000014.1:15024873-15033964[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-18 3.1e-14 54.1 3.2 1 34 149 181 149 183 0.97 2 2 3.1e-19 2.3e-15 57.7 5.8 1 35 203 236 203 237 0.98
Sequence Information
- Coding Sequence
- ATGTTCCAGACCAGCCCAGGCATGGGCTACTCCGATACCGCCCCCACGAGCGCCGCCTCCACAGGGGGTGGCTTCCTAGGCATGGGCTCATCCCACCCCCAGCACCCGGTGTACGTGCCGTCCAACCGCGCCGTGATGGGCCACCCCCACCACCATCACGCGCAGTACCCCACCGGATCGGGTGTCACCCCTGCTAGCAGCGCTCACCACTACTCGGGGGGTGGAGGAGGGGGTGCCACCCCCGCCGCGTGGCACCACCAGGAGGGGTACGTGACGTCGACCccccaccaccatcaccaccagcAGGCCACCCTGTCCGCTGCGCCGTTCTATGCGCAGAACGCGATGATGATGTCGTCTTGGAGGGCCTACGACGGGTCGGGCTTCCAGAGAACTTCGCCTTACGACAGCGCCATGGAGTTCCAGTTCGGTGAAGGGCGGGAGTGCGTCAACTGCGGCGCCATATCGACTCCCTTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGTAACGCGTGTGGCCTCTACCACAAGATGAACGGGATGAACCGGCCCCTCATCAAACCCTCCAAGAGGCTGACGGCGACCAGGCGGTTAGGCCTGTGTTGCACCAACTGCGGGACCCGCACCACGACGCTGTGGCGCCGGAACAACGACGGCGAGCCCGTGTGCAACGCGTGCGGCCTCTACTTTAAGCTGCACGGCGTCAACCGGCCGCTGGCCATGCGCAAGGACGGGATACAGACGCGCAAGCGCAAACCCAAGAAGCAGGGAGGCGCCGAGAAGACGCCGGGAGACGACGCCATCGCGAGCGGTGACCCGAAGAGCCCGCCGCAGCCCCTCCCGGAAGCACTGCTCCCTTCGAAGCCGTCGGAGCGGCCCTATCTAGGCCACACCTCACTGCTGCCAGCCTTGCAAGGCATCAAGGAGGAACCCCCTTCGGACACCATGTCCCTCGGAGGCAAAACCGCCCCTCTGGGGTTTCCTCCTGCCTCTCAACTCAGCAATTCTCAccaccacccccaccaccaGTTGTTCGGCTTCCAGTCACCAGGGGCGCCTCCGACCGACGTCGGCGGTTACGTCATGAGTCACCACCCTCATCACCctcaccaccatcaccatcaccaccatcacatGACGGCTGCCAAGCTAATGGCTACTacgtag
- Protein Sequence
- MFQTSPGMGYSDTAPTSAASTGGGFLGMGSSHPQHPVYVPSNRAVMGHPHHHHAQYPTGSGVTPASSAHHYSGGGGGGATPAAWHHQEGYVTSTPHHHHHQQATLSAAPFYAQNAMMMSSWRAYDGSGFQRTSPYDSAMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKQGGAEKTPGDDAIASGDPKSPPQPLPEALLPSKPSERPYLGHTSLLPALQGIKEEPPSDTMSLGGKTAPLGFPPASQLSNSHHHPHHQLFGFQSPGAPPTDVGGYVMSHHPHHPHHHHHHHHHMTAAKLMATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451140; iTF_01445328;
- 90% Identity
- iTF_01451140;
- 80% Identity
- -