Tbar004005.1
Basic Information
- Insect
- Timema bartmani
- Gene Symbol
- pnr
- Assembly
- GCA_902151455.1
- Location
- CABFWB010000154.1:51565-61412[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-18 4.2e-14 54.0 3.2 1 34 149 181 149 183 0.97 2 2 2.5e-19 3e-15 57.7 5.8 1 35 208 241 208 242 0.98
Sequence Information
- Coding Sequence
- ATGTTCCAGACCAGCCCAGGCATGGGCTACTCCGATACCGCCCCCACGAGCGCCGCCTCCACAGGGGGTGGCTTCCTAGGCATGGGCTCATCCCACCCCCAGCACCCGGTGTACGTGCCGTCCAACCGCGCCGTGATGGGACACCCCCACCACCATCACGCGCAGTACCCCACCGGATCGGGTGTCACCCCTGCTAGCAGCGCTCACCACTACTCGGGGGGTGGAGGAGGGGGTGCCACCCCCGCCGCGTGGCACCACCAGGAAGGGTACGTGACGTCGACCccccaccaccatcaccaccagcAGGCCACTCTGTCCGCTGCGCCGTTCTATGCGCAGAACGCGATGATGATGTCGTCTTGGAGGGCCTACGACGGGTCGGGCTTCCAGAGAACTTCGCCTTACGACAGCGCCATGGAGTTCCAGTTCGGCGAAGGGCGGGAGTGCGTCAACTGCGGCGCCATATCGACGCCCTTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGTAACGCGTGTGGCCTCTACCACAAGATGAACGGGATGAACCGGCCCCTCATCAAACCCTCCAAGAGGCTGTGCGATGTTCCACAGACGGCGACCAGGCGGTTAGGCCTGTGTTGCACCAACTGCGGGACCCGCACCACGACGCTGTGGCGCCGTAACAACGACGGCGAGCCCGTGTGCAACGCGTGCGGCCTCTACTTTAAGCTGCACGGCGTCAACCGGCCGCTGGCCATGCGTAAGGACGGGATACAGACGCGCAAGCGCAAACCCAAGAAGCAGGGAGGGGCCGAGAAGACGCCGGGAGAGGACGCCATCGCGAGCACCGGAAGAGCCCGCCGCAGCCCCTCCCGGAAGCATTGCTCCCCTCAGAAGCCGTCGGAGCGGCCCTATCTAGGCCACACCTCACTGCTGCCAGCCTTGCAAGGCATCAAGGAGGAACCCCCTTCAGACACCATGTCCCTCGGAGGCAAAACCGCCCCTCTGGGGTTTCCTCCTGCCTCTCAACTCAGCAATTCTCACCACCACCCCCACCACCAGTTGTTCGGCTTCCAGTCACCAGGGGCGCCTCCAACCGACGTCGGCGGTTACGTCATGAGTCACCACCCTCACCACCCtcaccaccatcaccatcaccaccatcacaTGACGGCTGCCAAGCTAATGGCTACTAcgtag
- Protein Sequence
- MFQTSPGMGYSDTAPTSAASTGGGFLGMGSSHPQHPVYVPSNRAVMGHPHHHHAQYPTGSGVTPASSAHHYSGGGGGGATPAAWHHQEGYVTSTPHHHHHQQATLSAAPFYAQNAMMMSSWRAYDGSGFQRTSPYDSAMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLCDVPQTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKQGGAEKTPGEDAIASTGRARRSPSRKHCSPQKPSERPYLGHTSLLPALQGIKEEPPSDTMSLGGKTAPLGFPPASQLSNSHHHPHHQLFGFQSPGAPPTDVGGYVMSHHPHHPHHHHHHHHHMTAAKLMATT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01450129;
- 90% Identity
- iTF_01451140;
- 80% Identity
- -