Basic Information

Insect: Timema podura
Gene Symbol: ZNF236
Assembly: GCA_033556935.1
Location: JAVRXN010000007.1:36348143-36399387[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.9e-06 0.0015 20.6 0.3 1 23 84 106 84 106 0.98

2 17 0.0073 1.4 11.3 0.5 1 23 112 134 112 134 0.98

3 17 1.7e-05 0.0033 19.6 2.4 3 23 141 161 140 161 0.97

4 17 0.05 9.6 8.7 0.4 3 23 169 189 167 189 0.95

5 17 0.016 3 10.2 5.5 1 23 199 221 199 221 0.98

6 17 5.1e-05 0.0098 18.1 4.2 1 23 244 266 244 266 0.98

7 17 0.00022 0.042 16.1 3.3 1 23 272 294 272 294 0.98

8 17 4.7e-05 0.0091 18.2 0.1 1 23 300 323 300 323 0.96

9 17 2.3e-05 0.0045 19.2 1.4 1 23 333 356 333 356 0.98

10 17 1.7e-05 0.0034 19.5 1.9 1 23 479 501 479 501 0.98

11 17 1.2e-06 0.00023 23.2 1.5 1 23 507 529 507 529 0.99

12 17 3.9e-06 0.00076 21.6 3.2 1 23 535 557 535 557 0.98

13 17 0.0042 0.81 12.0 4.0 1 23 563 585 563 585 0.94

14 17 3.4e-05 0.0065 18.6 3.2 1 23 650 672 650 672 0.98

15 17 4.8e-06 0.00092 21.3 0.5 1 23 678 700 678 700 0.99

16 17 5.3e-05 0.01 18.0 2.1 1 23 706 728 706 728 0.98

17 17 0.0014 0.28 13.5 6.6 2 23 735 756 734 756 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.9e-06	0.0015	20.6	0.3	1	23	84	106	84	106	0.98
2	17	0.0073	1.4	11.3	0.5	1	23	112	134	112	134	0.98
3	17	1.7e-05	0.0033	19.6	2.4	3	23	141	161	140	161	0.97
4	17	0.05	9.6	8.7	0.4	3	23	169	189	167	189	0.95
5	17	0.016	3	10.2	5.5	1	23	199	221	199	221	0.98
6	17	5.1e-05	0.0098	18.1	4.2	1	23	244	266	244	266	0.98
7	17	0.00022	0.042	16.1	3.3	1	23	272	294	272	294	0.98
8	17	4.7e-05	0.0091	18.2	0.1	1	23	300	323	300	323	0.96
9	17	2.3e-05	0.0045	19.2	1.4	1	23	333	356	333	356	0.98
10	17	1.7e-05	0.0034	19.5	1.9	1	23	479	501	479	501	0.98
11	17	1.2e-06	0.00023	23.2	1.5	1	23	507	529	507	529	0.99
12	17	3.9e-06	0.00076	21.6	3.2	1	23	535	557	535	557	0.98
13	17	0.0042	0.81	12.0	4.0	1	23	563	585	563	585	0.94
14	17	3.4e-05	0.0065	18.6	3.2	1	23	650	672	650	672	0.98
15	17	4.8e-06	0.00092	21.3	0.5	1	23	678	700	678	700	0.99
16	17	5.3e-05	0.01	18.0	2.1	1	23	706	728	706	728	0.98
17	17	0.0014	0.28	13.5	6.6	2	23	735	756	734	756	0.97

Sequence Information

Coding Sequence: ATGGGGATGAATATGGATCTCCCCGCCCTCGACAAGGAGCCCAGAGAGGAACTTGCTAGCCAACTAGGGGAGTTAGAGGAGGAGACAGGAGCGGAGAAGGAGCTACATTTCCACATAATTGGACCGCGACCACCTCGCCACTGTCCCTCGCTGATCCCGTCCTTCAAGAATGATCCTGTCGCGAGGAGAGGACCTGGCCGCCCACGCAAAGACGAGACTGAGGTGGAGCCACCTGTGGGGAAGGGCCCCTTCAGGTGCAACGTTTGTGCCAAGGAATTTCCCAAGTGGGCCCAGCTCCGTCGTCACATAAAACTCCACTCAGAAGACAAGCCATACCGCTGTCACTCATGCTCTGCCACGTTCAATGTCGCAGTCAACCTGTCTTTGCACGAGGCCACCCACAACGTAAAGGACCCGTGCTGTCCCGAGTGTCACAAAAGGTTCAGCCGCATCGCCAGCCTCAAGGCGCACATCATGGTGCACGAGCAGGAGGAAAACCTATTTTGCTCTGACTGCGGGGATGAGTTCAACACCCAGATGCAACTTGATGAGCACAAGAAAGAACACGAAGAAGTGAAAGCTTTCTCCAGAAAGTACCGGTGTCACCAGTGCTACCAACACTTTTCTCTGTATTCTGCACTGCGAGAACACTTGAAAGATCATAACAAGGTGAAAGCTTCGCTGAGTCACAAATGTCACAAACGCAATATTGATCGAACTGCCTTCTGTCACAAATGTGACACGTGCACCAAAAGCTTCCAGAAACCAAGTCAGCTGCTTCGACATAAGCGCATACATACTGGAGAAAGACCTTATAAGTGTCATCAGTGTATGCGTGCCTTCAACCAAAAGGGCTCACTACAAATACACATGACGAAACACAACGGTCTGAAGCCTTTTCCATGTGACTTTTGCTCCGCCATGTTCAGCCAGAGAGGAAACCTTCGAGCACACATCATTAGAGTCCACACTATTCCCACCTGTGGTGAGCAGGTGTACAAGTGCAACGAGTGTCCTTGTGCATTCAAGAAGCTTGGCAGTCTCAATGCTCACATGAGTCGGATGCATGTTGCAGACAAGTTGGGTGTTGTTGAGATATTGGGAGAGCAGCAAGGAGAAGCTAACATGAGTGCGGTGATGTCATCATTAGCCGAGCTACAGAAGGAGCTCGGGGAAACCCCACAAAGCTCAGACGCAGACATTCTTCATCAGGCCATCGTCAACAGTGGATTGTCTAACAACAAACCAGCCAGCACTCCAGAATCAAAACCGTCTGAGCCACGCGACGCTTCAAGAAAGAAAACTGGTGAAGACCCCCACACCTTCGAAAAGGACGGAGAGTCGACATCGCTCATTACGCTCGCTGATAAGGGGCAGGATGGTGTTGTCAGGAGGTATGTCATTCGTCAGCgcaaggttggcaatatgcgtTGGCACCAATGTTCCTATTGTATGAAGGAGTTCAAGAAACCATCTGATCTCGTCCGACATATTCGCATCCACACAAATGAGAAGCCGTTTAAGTGCAATCAATGCACGCGATCATTTGCCGTGAAGTCAACGTTGACAGCGCACATCAAGACTCACACAGGCATCAAGGACTACACTTGTGCTCACTGTTTCAAGAAGTTCTCTTCGTCCAGCAGTCTCAACGTTCACATAAGATTGCACACGGGACATAAGCCCTTCAGATGCCCTCATTGCAGCAAGGCGTTTCGCACTGTGGGGCATCGCAAGGCGCATGTCACCTTCCACTGCAAGCAAAACCTGACAGCTCACGAGAGAGCACTTCTTAGGCTGGCTCATAGGAACAAATTACAGATGAACGACTTGCCCGAGGTCACTCTTGCGGAACCCATCATCATCACAGACTCTGGGCTGGTGCAAAATGTGGCACGTAACGCTTCTGTTTTCCTTTCTGGTGATCTCACCAGCACAGAAAGGCCATATAAGTGCCAAATTTGCAACGCGGCTTTCCGCAAAACCAGCCACCTCAAACAACATGTCCGCCAGCATACGGGAGAACGACCGTACACTTGCATGGAATGTAATAAGTCATTTATTTCCAATGGCGTGCTGAAGGTCCACTTACGCACCCATCAAGGCATCAAGATGTTTAAGTGCAAAACTTGCAACAACTTGTTCTCGACCAATGGCAGCTTAAAGCGGCACATGGGAACCCACAGCGACCACCGACCAATCATGTGTCCTTACTGTCACAAGACTTTTAAAAGCACTGTTAGCTGCCGCAAGCACATGAAGACACACAAACAGGAAATAGCCATGCAGGTCCTGGAGCAGACAGGTTTAAGGAGACGGGAAGGGGGAGAACCCATAACGGTGATTGCTAACAACGGTTCAAGTTTCCCAGCCGATGGTCTGGGCCCGGACTTTACTCAGGCGTTCTCAGACCGACCGTTCCATGTGGCCTCTATAGAGCAAGCAGAGCAAGACGAGAGCACTTTCGCACAGAATACGCTTGTACAGACACTTTCCACAGATGTGATTGGTGGTGAACAAGAAGCTGATATGAACACAGCTACAATAATTACCCACACCCTCCATGCAGACTCTACAGGCACAATCACTCTACCCACCCTAGCTGGACAAAACGCATTAACTCAGGAAAACCTTCAGGAGATTGAGCGCACTTTGAATGAGCAAATCTTCGGGAACTCCAGCTCTATGGCGGAGGAAGTTCAGACAGTGACCATGTCCCTTGCTGGGGAGTTGGCCGAGGAGAGAGAGGATGACAGCACTGTGGACCTTGGAGAACACCCTTGTTCGCCTGAGGGAGAGAGGGACAGAGATGACACCTCCCAACCTGACACAGAGTTCAGCAACCAGTTTGAGCCATGTACCTTCAACATACAGAGTGACCCCTTAGAACTTGACAACCTGGAGCATGAGGACACCCTCGCGCCTACCATTGTGAACATAATATCTCCTGTATGCAGTGGGACCAACACAATGAGACATTCGCCAGAGGGAGAACCTCGGCACGCCGTCCAAGAAGAGGAAGGGGAAGCACAAAATGAGCCCGATTCACAGGAGGAATACGAGGCACCGAACGAACCTGATTCTCAGGAGGATGATATGGACGATGAGGGGATCCGCAGACCTTACAACCATGTCAAATGTGTTAAACGAGGAATACACGGaggggtggactgggccacCAGGAGACTGGGAGATATCTTGGTGGGCCAGTATGATTTGGGTTGCTACAACTACAGAGTGGCCCAAAAGTCCCACATCAGTGCTTTGTAA
Protein Sequence: MGMNMDLPALDKEPREELASQLGELEEETGAEKELHFHIIGPRPPRHCPSLIPSFKNDPVARRGPGRPRKDETEVEPPVGKGPFRCNVCAKEFPKWAQLRRHIKLHSEDKPYRCHSCSATFNVAVNLSLHEATHNVKDPCCPECHKRFSRIASLKAHIMVHEQEENLFCSDCGDEFNTQMQLDEHKKEHEEVKAFSRKYRCHQCYQHFSLYSALREHLKDHNKVKASLSHKCHKRNIDRTAFCHKCDTCTKSFQKPSQLLRHKRIHTGERPYKCHQCMRAFNQKGSLQIHMTKHNGLKPFPCDFCSAMFSQRGNLRAHIIRVHTIPTCGEQVYKCNECPCAFKKLGSLNAHMSRMHVADKLGVVEILGEQQGEANMSAVMSSLAELQKELGETPQSSDADILHQAIVNSGLSNNKPASTPESKPSEPRDASRKKTGEDPHTFEKDGESTSLITLADKGQDGVVRRYVIRQRKVGNMRWHQCSYCMKEFKKPSDLVRHIRIHTNEKPFKCNQCTRSFAVKSTLTAHIKTHTGIKDYTCAHCFKKFSSSSSLNVHIRLHTGHKPFRCPHCSKAFRTVGHRKAHVTFHCKQNLTAHERALLRLAHRNKLQMNDLPEVTLAEPIIITDSGLVQNVARNASVFLSGDLTSTERPYKCQICNAAFRKTSHLKQHVRQHTGERPYTCMECNKSFISNGVLKVHLRTHQGIKMFKCKTCNNLFSTNGSLKRHMGTHSDHRPIMCPYCHKTFKSTVSCRKHMKTHKQEIAMQVLEQTGLRRREGGEPITVIANNGSSFPADGLGPDFTQAFSDRPFHVASIEQAEQDESTFAQNTLVQTLSTDVIGGEQEADMNTATIITHTLHADSTGTITLPTLAGQNALTQENLQEIERTLNEQIFGNSSSMAEEVQTVTMSLAGELAEEREDDSTVDLGEHPCSPEGERDRDDTSQPDTEFSNQFEPCTFNIQSDPLELDNLEHEDTLAPTIVNIISPVCSGTNTMRHSPEGEPRHAVQEEEGEAQNEPDSQEEYEAPNEPDSQEDDMDDEGIRRPYNHVKCVKRGIHGGVDWATRRLGDILVGQYDLGCYNYRVAQKSHISAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01446814; iTF_01445850;
90% Identity: iTF_01446814; iTF_01445850;
80% Identity: -