Basic Information

Insect: Timema douglasi
Gene Symbol: ZNF236
Assembly: GCA_901482245.1
Location: CABEEJ010001697.1:45514-83468[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.9e-06 0.0024 20.5 0.3 1 23 210 232 210 232 0.98

2 17 0.0031 0.74 12.7 0.4 1 23 238 260 238 260 0.98

3 17 8.8e-06 0.0021 20.7 0.9 2 23 266 287 266 287 0.98

4 17 0.063 15 8.5 0.4 3 23 295 315 293 315 0.95

5 17 0.02 4.7 10.1 5.5 1 23 326 348 326 348 0.98

6 17 6.4e-05 0.015 18.0 4.2 1 23 371 393 371 393 0.98

7 17 0.00027 0.065 16.0 3.3 1 23 399 421 399 421 0.98

8 17 5.9e-05 0.014 18.1 0.1 1 23 427 450 427 450 0.96

9 17 2.9e-05 0.0069 19.0 1.4 1 23 460 483 460 483 0.98

10 17 2.2e-05 0.0052 19.4 1.9 1 23 606 628 606 628 0.98

11 17 7.1e-06 0.0017 21.0 2.1 1 23 634 656 634 656 0.99

12 17 4.9e-06 0.0012 21.5 3.2 1 23 662 684 662 684 0.98

13 17 0.0053 1.3 11.9 4.0 1 23 690 712 690 712 0.94

14 17 4.2e-05 0.01 18.5 3.2 1 23 777 799 777 799 0.98

15 17 3.5e-06 0.00083 21.9 0.4 1 23 805 827 805 827 0.99

16 17 6.6e-05 0.016 17.9 2.1 1 23 833 855 833 855 0.98

17 17 0.0018 0.43 13.4 6.6 2 23 862 883 861 883 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.9e-06	0.0024	20.5	0.3	1	23	210	232	210	232	0.98
2	17	0.0031	0.74	12.7	0.4	1	23	238	260	238	260	0.98
3	17	8.8e-06	0.0021	20.7	0.9	2	23	266	287	266	287	0.98
4	17	0.063	15	8.5	0.4	3	23	295	315	293	315	0.95
5	17	0.02	4.7	10.1	5.5	1	23	326	348	326	348	0.98
6	17	6.4e-05	0.015	18.0	4.2	1	23	371	393	371	393	0.98
7	17	0.00027	0.065	16.0	3.3	1	23	399	421	399	421	0.98
8	17	5.9e-05	0.014	18.1	0.1	1	23	427	450	427	450	0.96
9	17	2.9e-05	0.0069	19.0	1.4	1	23	460	483	460	483	0.98
10	17	2.2e-05	0.0052	19.4	1.9	1	23	606	628	606	628	0.98
11	17	7.1e-06	0.0017	21.0	2.1	1	23	634	656	634	656	0.99
12	17	4.9e-06	0.0012	21.5	3.2	1	23	662	684	662	684	0.98
13	17	0.0053	1.3	11.9	4.0	1	23	690	712	690	712	0.94
14	17	4.2e-05	0.01	18.5	3.2	1	23	777	799	777	799	0.98
15	17	3.5e-06	0.00083	21.9	0.4	1	23	805	827	805	827	0.99
16	17	6.6e-05	0.016	17.9	2.1	1	23	833	855	833	855	0.98
17	17	0.0018	0.43	13.4	6.6	2	23	862	883	861	883	0.97

Sequence Information

Coding Sequence: ATGGAGACACAAAACTTGAGTGAAGTTCCAGCCGGCGATTCGCAGTTTGTCTCTGTACCACTAGACAGTATACTTTCTAGCAGTGGATTTGTTTTTGCTGGAGATGGCAACAATCTGGTCACAACTTCAGataatctTGAAGATGGAACCACAACATTCTTAACCGTCCCATTGCATTTTCTTGAAGAAAATGCGATCATCGATCAAGGGACTCCCCACAACATCATTCTGAAAAGTATTAGCAACAATAATTTAGGACTGTTCTTGGACGGTACCCAgTTGGCACTTCTCAACAACAATCCTGGGACTCTTAATTCTGGGTGTGATGTAGACGAGGCTCAATGTGacatagagagagaaaaaactgaGGAATTGCGCATGGGGATGAACATGGATCTCCCTGCCCTCGACAAGGAGCACAGAGAGGGGCTTACTTGCCAACTGGGGGAGTTAGAGGAGGAGACAGGAGAGGAGAAGGAGCTACATTTCCACATAATTGGACCGCGCCCACCTCGGCACTGTCCCTCGCTGATCCCGTCCTTCAAGAATGATCTTGCCGCCAGGAGAGGACCTGGCCGCCCACGCAAAGACGAGACTGAGGTGGAGCCACCTGTGGGAAAGGGCCCCTTCAGGTGCAACGTTTGTGCCAAGGAATTTCCCAAGTGGGCCCAGCTCCGTCGTCACATAAAACTCCACTCAGAAGACAAGCCATACCGCTGCCACTTGTGCTCTGCCACGTTCAATGTTGCAGTCAACCTCTCTCTTCACGAGGCCACCCACAACGTAAAGGACCCGCGTTGTCCCGAGTGTCACAAGAGGTTCAACCGCATCGCCAGCCTCAAGGCGCACATCATGGTGCACGAGCAAGAGGAAAACCTATTCTGCTCTGACTGCGGGGATGAGTTCAACACCCAGATGCAACTTGATGAGCACAAGAAAGAACACGACGAAGAAGTGAAAGCTTTCTCCAGAAAGTACCGGTGTCACCAGTGCTACCAACACTTTTCTCTATATTCTGCACTGCGAGAACACTTGAAAGATCATAACAAGGTGAAAGCTTCGCTGAGTCACAAATGTCACAAACGCAATATTGATCGAACTGCCTTCTGTCACAAATGTGATACGTGTACCAAAAGTTTCCAGAAACCAAGTCAGCTGCTTCGACATAAGCGCATACATACTGGGGAAAGACCTTATAAGTGTCATCAGTGTATGCGTGCCTTCAACCAAAAGGGCTCACTACAAATACACATGACGAAACACAATGGTCTGAAGCCTTTTCCTTGTGATTTTTGCTCCGCCATGTTCAGCCAGAGAGGAAACCTTCGAGCGCACATTATCAGAGTCCACACTATCCCCACCTGTGGTGAGCAGGTGTACAAGTGCAACGAGTGTCCTTGTGCGTTCAAGAAGCTTGGCAGCCTCAATGCTCACATGAGTCGGATGCATGTTACAGACAAGCTGGGTGTCGTTGAGATATTGGGAGAGCAGCAAGGAGAAGCTAACATAAGTGCGGTGATGTCATCATTAGCCGAGCTACAGAAGGAGCTCGGAGAAACCCCACAAAGCTCAGACGCAGACATTCTTCATCAGGCCATCGTCAACAGTGGATTGTCTAACAATAAACCAGCCAGTGCTCCAGAATCAAAACTATCTGAACCATGTGACGCTTCAAGAAAGAAAACCGGGGAAGACCCCCACACCTTCAAAAAGGATGGAGAGTCGACATCGCTCATTACGCTTGCTGATAAGGGGCAGGATGGTATTGTCAGGAGGTATGTCATTCGTCAGCGCAAAGTTGGCAATATGCGTTGGCACCAATGTTCCTATTGTATGAAGGAGTTCAAAAAACCATCTGATCTCGTCCGACATATCCGCATCCACACAAATGAGAAGCCGTTTAAGTGCAATCAATGCACGCGATCATTTGCCGTGAAGTCAACTTTGACGGCGCACACCAAGACTCACACAGGCATCAAGGACTACACTTGTGCTCACTGCTTCAAGAAATTCTCTTCCTCCAGCAGTCTCAACGTTCACATAAGATTGCACACGGGACATAAGCCCTTCAGATGCCCTCATTGCAGCAAGGCGTTTCGCACTGTGGGTCATCGCAAGGCGCATGTCACCTTCCACTGCAAGGAAAACCTGACTGCTCACGAGAGAGCACTTCTTAGGCAGGCTCATAGGCATAAATTACAGATGAACAACTTGCCCGAGGTCACTCTTGCGGAACCCATCATTATCACAGACTCTGGGTTGGTGCAAAATGTGGCACGTAACGCTTCTGTTTTCCTTTCTGGTGATATCACCAGCACAGAACGGCCATATAAGTGCCAAATTTGCAACGCGGCTTTCCGCAAAACCAGCCACCTCAAACAACATGTCCGCCAGCATACGGGAGAGCGACCGTACACTTGCATGGAATGTAATAAGTCGTTTATTTCCAATGGCGTGCTGAAGGTCCACATACGTACCCATCAAGGCATCAAGTTGTTTAAGTGCAAAACTTGCAACAACTTGTTCTCGACCAATGGCAGCTTAAAGCGGCACATGGGGACCCACAGCGACCATCGACCAATCATGTGTCCTTACTGTCACAAGACTTTTAAAAGCACTGTCAGCTGCCGCAAGCACATGAAGACACACAAACAGGAAATAGCCATGCAGGTCTTGGAGCAGACAGGTTTAAGGAGACGGGAAGGGGGAGAACCCATTACAGTGATTGCTAACAACGGTTCAAGTTTCCCAGCCGACGGTTTGGGACCGGACTTTACTCAGGCGTTCTCAGACCAACCATTCCATGTGGCCTCCATAGAGCAAGCAGAGCAAGACGAGAGCACTTTCGCACAGAATACGCTCGTACAGACACTTTCCACAGatGTGATTGGTGGTGAACAAGAAGCTGATATGAGCACAGCTACGATAATTACCCACACTCTCCATGCAGACTCGACAGGCACAATCACGCTACCCACCCTAGCTGGACAAAATGCATTAACTCAGGAAAACCTGCAGGAGATTGAGCGCACTTTGAATGAGCAAATCTTCGGCAACTCCAGCTCTATGGCGGAGGAAGTTCAGACAGTGACCATGTCCCTTGCCGGGGAGTTGGCCGAGGAGAGAGAGGGCGACAGCAACGTGGACCTGGGAGAACGCCCTTGTTCGCCAGAGGAAGAGAGGGACAACGATGACACCTCCCAACCTGACACAGAGTTCAGCAACCAGTTTGAGCCGTGTACCTTCGACATACAGagTGACCCCTTAGAACTTGACAGCTTAGAGCATGAGGACACCCTCGCGCCTACCATTGTGAGCATAATATCTCCTGTATGCAGTGGGGCCAACACGATGAGACAATCACCAGAGGTAGAACTTCGGTATGCCATCCAAGACGAGGAAGGGGAAGCACAAAATGATCCCGATTCACAAGAAGAATACGAGGTACCGAATGAACCTGATTCTCAGGAGGATGATGTGGACGATGAGGGGATCCGCAGACCTTACAAGTga
Protein Sequence: METQNLSEVPAGDSQFVSVPLDSILSSSGFVFAGDGNNLVTTSDNLEDGTTTFLTVPLHFLEENAIIDQGTPHNIILKSISNNNLGLFLDGTQLALLNNNPGTLNSGCDVDEAQCDIEREKTEELRMGMNMDLPALDKEHREGLTCQLGELEEETGEEKELHFHIIGPRPPRHCPSLIPSFKNDLAARRGPGRPRKDETEVEPPVGKGPFRCNVCAKEFPKWAQLRRHIKLHSEDKPYRCHLCSATFNVAVNLSLHEATHNVKDPRCPECHKRFNRIASLKAHIMVHEQEENLFCSDCGDEFNTQMQLDEHKKEHDEEVKAFSRKYRCHQCYQHFSLYSALREHLKDHNKVKASLSHKCHKRNIDRTAFCHKCDTCTKSFQKPSQLLRHKRIHTGERPYKCHQCMRAFNQKGSLQIHMTKHNGLKPFPCDFCSAMFSQRGNLRAHIIRVHTIPTCGEQVYKCNECPCAFKKLGSLNAHMSRMHVTDKLGVVEILGEQQGEANISAVMSSLAELQKELGETPQSSDADILHQAIVNSGLSNNKPASAPESKLSEPCDASRKKTGEDPHTFKKDGESTSLITLADKGQDGIVRRYVIRQRKVGNMRWHQCSYCMKEFKKPSDLVRHIRIHTNEKPFKCNQCTRSFAVKSTLTAHTKTHTGIKDYTCAHCFKKFSSSSSLNVHIRLHTGHKPFRCPHCSKAFRTVGHRKAHVTFHCKENLTAHERALLRQAHRHKLQMNNLPEVTLAEPIIITDSGLVQNVARNASVFLSGDITSTERPYKCQICNAAFRKTSHLKQHVRQHTGERPYTCMECNKSFISNGVLKVHIRTHQGIKLFKCKTCNNLFSTNGSLKRHMGTHSDHRPIMCPYCHKTFKSTVSCRKHMKTHKQEIAMQVLEQTGLRRREGGEPITVIANNGSSFPADGLGPDFTQAFSDQPFHVASIEQAEQDESTFAQNTLVQTLSTDVIGGEQEADMSTATIITHTLHADSTGTITLPTLAGQNALTQENLQEIERTLNEQIFGNSSSMAEEVQTVTMSLAGELAEEREGDSNVDLGERPCSPEEERDNDDTSQPDTEFSNQFEPCTFDIQSDPLELDSLEHEDTLAPTIVSIISPVCSGANTMRQSPEVELRYAIQDEEGEAQNDPDSQEEYEVPNEPDSQEDDVDDEGIRRPYK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01449815;
90% Identity: iTF_01449815;
80% Identity: -