Tpod028305.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- dsx
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000008.1:27999050-27999713[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-24 6.9e-20 72.5 11.3 2 47 27 72 26 72 0.97
Sequence Information
- Coding Sequence
- ATGTCGGACAGTGAAGGTAAAGGCGATACTTCGGGAAACCTCTTAACGCCCAGCAGTAGTTCTCAGTCGCCCAGGACGCCACCCAACTGCGCGCGATGCCGCAACCACCGCCTCAAGATCGCCCTGAAGGGCCACAAGAGGTATTGCAAGTTCCGCTACTGCAACTGCGACAAGTGCCGTCTGACGGCGGAGAGGCAGCGCGTAATGGCGCTGCAGACAGCGCTTAGGCGGGCTCAGGCACAAGACGAGAGATACCTGGCGTCACAGGCTTCCAGCCCCGAACAACCGGCTCCACCTACGACGTCGTCAAGATGCCGTCTAGAGACCGGTGGTGGTGGCCCCCCAAGAAGGATGGAATCACCACCCTCAAATTGTCGCGTGGAGGCGCCGCCTTTCGCCATCCCGGTGGCCAGGTCCGCAGAGGGAAGTTGTGACTCTTCGTCTTCGTCCCCTTGCTCGGGGGGTGGTGCCGCCTCTCGGGTGGTTTCAGTGCCCGCCGCCAGAAAACTGCTCCCCACCCATCAGGAGCTGCCGCCCCCTACCTCCGCCGGCGTTGGTGAGTCAATAGTTActagacctaacctaacttactATACCTACCATGCATGGATAGAGTGA
- Protein Sequence
- MSDSEGKGDTSGNLLTPSSSSQSPRTPPNCARCRNHRLKIALKGHKRYCKFRYCNCDKCRLTAERQRVMALQTALRRAQAQDERYLASQASSPEQPAPPTTSSRCRLETGGGGPPRRMESPPSNCRVEAPPFAIPVARSAEGSCDSSSSSPCSGGGAASRVVSVPAARKLLPTHQELPPPTSAGVGESIVTRPNLTYYTYHAWIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01445706;
- 90% Identity
- iTF_01444817;
- 80% Identity
- -