Tpod048716.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- lrrfip2
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000011.1:79112467-79133336[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-78 1.3e-73 249.7 23.3 7 300 671 963 670 963 0.89 2 3 0.4 2.6e+04 -4.1 0.3 119 173 1086 1140 1076 1156 0.77 3 3 0.00051 33 5.5 3.9 119 173 1447 1501 1435 1504 0.88
Sequence Information
- Coding Sequence
- ATGGAAGATGCCGACGAATGTTGCTTCTACGACGCCGTCAGTGAGATACCCCTGAGCAAGCCGAGGATGGGCAACACCGCCGGTGCGGAGGGCACCAAAGGGGGCGGACGCCCAGGTCTCACCGACGAGTTCCCCATTGTTCCGGTGATTGACCCGCGACAAGACGACAGTGAAGAAGACGACACCTCAAGTAGTAATCCCGAGATTAGCTCGCGTTTCTCAGATAAATCCGCTCCAATCGATAGCGATAAGGAAAGTTCGACATCGCTCAGTGATAAATCAGATCTGGACGAAAGAGCCGATTCGGGCAGACCGTCGATGGCGGTTTCTTCGAGAGACCCGCGCTGTGCAGAGGCGTCCGTCGGCGCCGACAGTTCGGGTGAAGAGGACGCCGGTGTCGCGACCTTTGACGACGAGGGCTCGCTCAGGGTAGACCGTGATGTGACGAGGGTGGGTGACCTGGGTGTGAATCTGCCGGACACATTCGGGGAGAGTACGACTGAAGACTGTGAGGTCCAGAGTGTAGGTGACCCCGTAGTCGAGGAAAAGATTGTACTCAACCTTCGTAAGGATGTGCTGGCTACGCCCCCCAAGGATGAGGAGCCTGACGGTGAAGTCTCAGACGTGAGTTCCTCGGCCCTTGGAAACATCCCGCAGTCAAGTCCTGGCAGTGGCAAGTCCTCTGTATCCACTGAGGAAGGTGTTGTAGTGTCCAAATACATCGTGAAAACCGTTGAGGACACTCTTTTGGCCACTGAAAGTGGATGTGATAGGGCTGACTCCCAGGATAGTAGGAAGTGTCTTGATGAGGCACCCTCTGAAGAAAGTGCTAACCAAGTTGTAGGGTCTGATCCCACAGGAAGTTCTGTGATTGACAATAGTGCTGCAGGAAGTGGATCTAATAAGAAGGTGGACATTGGAAATGATATCACTGACATCAGCACAGAGGAAGAAAGGTTAGTTTCTAAAGTAGATGATGAAAAGGGAGAAGATATTGATATAATTCCAAAGAACAAGGATATAGTTGGTGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAATGATGTGGTCGTTGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAACGATGTGGTCGGTGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAACGATGGGGTCGGTGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAATGAAGTGGTCGATGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAATGAAGTGGTCGATGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAATGAAGTGGTCGATGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAACGATGGGGTCGGTGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAATGAAGTGGTCAATGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAACGATGGGGTCGGTGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAACGATGGGGTCGATGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAACGATGGGGTCGGTGAATTAGGGGATGTAAAGGAGGAAGATGGGAAGAAAAATGATGTGGTTGGTGAAATAAGGGCTGCTAATGATGATAACAGGGGTGTCAAAAGAGTAGAAAATGTGCCAGGTCAGTTTTGGGaggaaagcaagactgagaatGAAGACACCGCTGACATCAACGGAATGAAAGAGGATGCAGTTGATAAAGCTGTGAATAGAAACGATGGTGATTATAGTACAGAAGATAGTGATGGTTATGATCTTGAAAACGATGAAGATATCAATAACAAACACAGAAGTAAAGGGAATATGGTCGATGAAACAGAGAACGAAGAGGATGCCGAGTCGTGCAGATTCTCACTTGGTAGCTTGGGGACAGGCGAGGACAGAGACCTTGTGGATGATCCCCTTGGGTTGTTCTGCAGAGGCCCGCCTTGCAGCAGGAGGCAGGCGAGGGCAGAGGCCCGGGAGATACGCATGCGGGAACTTGAGAGGCAACAGAAGGAAATTGAGGAGAACACCAACAAGAGTTATGACTCCTTCACCGCATCGCCTCATGCTCTCTCTGCGGGCTTTATGTTCTGTAGCAGAGCCGGAAATAGGACGCCCCGTGTGGCCGCCTCCGTGAACCGCAGCAGCTCGCTGCTCTCTGGTGGGGGTAACAACAGTTACCACTCGAGTCGGCGCAGCTCGGAGGACTCGCTGGAGGAAGGGATCAGCCTCAGGGATGTCCGGGTCAGCAATGATACAGAATGCCCAGTTGATAACGAGAAGGCATCCCTCACCTACCAGGTGGAACTCCTTAAGGACAGGCTGGAAGATCTGGAGGAGTCCCACTCGCAGTTGCAGCGTGAGAACCGAGACAAGTGTCGAGAACACGATCAGCTCAAGAGAGCGTCCGCCAAGTTGAAGGAAGACATGGAGTGGTACAAGGCGCAGTTAGAAGAGAGGGACAGACTCATTCAGGAGAAGGGCCTTATAATCGTGGGTGACGACCAGCTTTCCAGCGAGGACGAAAGTGTGGAGGGCTCTGGTCTCCATCGAGTCGGCGGAGATGTTGGAAACTGCAGGGGAGGCTCTTTAGATGTACGGCTGAGGAGGTTTGCGGAGGAGCGCAACGAACTGCTGGACCAAGTGAGGCACCTCAAACTTGAATTGGAAGAGGAGCGCAGCAGACACAAGTCCGACGCCAAGAGGATACCTGGGGCCAGCCTCAACGGCCCTGACACAGATTTTGAGGACATTCAGAGGGAGGCCAACAAGCTTCTAGGGGACTACAAGTTCAAGCTCCAGAAAGCGGAGCAGGATGTGTCTACACTGCAGGCCAATGTAAGTACTAACTTTCGGCTACATCTTCATTATAAGCAGGATGTGTCTACACTACAGGCCAATGTGAGTACTAACTTCCGGCTAAATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAACTACCGGCTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAATTACCGGCTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAACTACCGGCTACATCTTCATTATAAGCAGGATGTGTCTACACTACAGGCCAATGTGAGTACTAACTTCCGGCTAAATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTAAGTACTAACTCCCGGCTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATTTGTCTACACTGCAGGCCAATTTAAGTACTAACTCCCGGCTACATCTTCATTATAATCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAACTACCGGCTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCTAATGTGAGTACTAACTACCGGCTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAACTACCAGCTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATTTGTCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAATCAGGATTTGTCTACACTCCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATTTGTCTACACTGCAGGCCAATGCCTATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATTTGTCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATGTATCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATGTGTCTACACTGCAGGCCAATGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATTTGTCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATTTGTCTACACTGCAGGCCAATGTGAGTACTAACTTCCGACTACATCTTCATTATAAGCAGGATTTGTCTACACTGCAGGCCAATGTGGTGCGTCTTGAGAGCCAGGTGATCAGGTACAAGTCTGCCTCGGAGTCCTCGGAGAAGGGCGAGGATGAACTTAAGGTTGAAAAGAGGAAACTTCAGAGAGAGGTGCGAGAGTTGACGCAGCAACTGAGTCAGGCCGAGGCGGCTAAGGCTGCCTTGACTCATCAGTTCGACCAGCTTATGCTCGCCAAGAGATAA
- Protein Sequence
- MEDADECCFYDAVSEIPLSKPRMGNTAGAEGTKGGGRPGLTDEFPIVPVIDPRQDDSEEDDTSSSNPEISSRFSDKSAPIDSDKESSTSLSDKSDLDERADSGRPSMAVSSRDPRCAEASVGADSSGEEDAGVATFDDEGSLRVDRDVTRVGDLGVNLPDTFGESTTEDCEVQSVGDPVVEEKIVLNLRKDVLATPPKDEEPDGEVSDVSSSALGNIPQSSPGSGKSSVSTEEGVVVSKYIVKTVEDTLLATESGCDRADSQDSRKCLDEAPSEESANQVVGSDPTGSSVIDNSAAGSGSNKKVDIGNDITDISTEEERLVSKVDDEKGEDIDIIPKNKDIVGELGDVKEEDGKKNDVVVELGDVKEEDGKKNDVVGELGDVKEEDGKKNDGVGELGDVKEEDGKKNEVVDELGDVKEEDGKKNEVVDELGDVKEEDGKKNEVVDELGDVKEEDGKKNDGVGELGDVKEEDGKKNEVVNELGDVKEEDGKKNDGVGELGDVKEEDGKKNDGVDELGDVKEEDGKKNDGVGELGDVKEEDGKKNDVVGEIRAANDDNRGVKRVENVPGQFWEESKTENEDTADINGMKEDAVDKAVNRNDGDYSTEDSDGYDLENDEDINNKHRSKGNMVDETENEEDAESCRFSLGSLGTGEDRDLVDDPLGLFCRGPPCSRRQARAEAREIRMRELERQQKEIEENTNKSYDSFTASPHALSAGFMFCSRAGNRTPRVAASVNRSSSLLSGGGNNSYHSSRRSSEDSLEEGISLRDVRVSNDTECPVDNEKASLTYQVELLKDRLEDLEESHSQLQRENRDKCREHDQLKRASAKLKEDMEWYKAQLEERDRLIQEKGLIIVGDDQLSSEDESVEGSGLHRVGGDVGNCRGGSLDVRLRRFAEERNELLDQVRHLKLELEEERSRHKSDAKRIPGASLNGPDTDFEDIQREANKLLGDYKFKLQKAEQDVSTLQANVSTNFRLHLHYKQDVSTLQANVSTNFRLNLHYKQDVSTLQANVSTNYRLHLHYKQDVSTLQANVSTNYRLHLHYKQDVSTLQANVSTNYRLHLHYKQDVSTLQANVSTNFRLNLHYKQDVSTLQANVSTNSRLHLHYKQDVSTLQANVSTNFRLHLHYKQDLSTLQANLSTNSRLHLHYNQDVSTLQANVSTNYRLHLHYKQDVSTLQANVSTNYRLHLHYKQDVSTLQANVSTNYQLHLHYKQDVSTLQANVSTNFRLHLHYKQDLSTLQANVSTNFRLHLHYNQDLSTLQANVSTNFRLHLHYKQDVSTLQANVSTNFRLHLHYKQDVSTLQANVSTNFRLHLHYKQDLSTLQANAYVSTNFRLHLHYKQDLSTLQANVSTNFRLHLHYKQDVSTLQANVSTNFRLHLHYKQDVSTLQANANVSTNFRLHLHYKQDLSTLQANVSTNFRLHLHYKQDLSTLQANVSTNFRLHLHYKQDLSTLQANVVRLESQVIRYKSASESSEKGEDELKVEKRKLQREVRELTQQLSQAEAAKAALTHQFDQLMLAKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -