Tpod037389.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- TFIP11
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000009.1:113298500-113316730[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-96 2e-92 311.5 20.4 1 275 79 345 79 345 0.97 2 2 0.12 2e+03 -0.0 0.0 157 189 357 388 350 396 0.73
Sequence Information
- Coding Sequence
- ATGGTCTCTGTTGGAGCACATCTGCTACATCTTGATACATTGTTGCAGGATATAATTCAGAACAACCAGAAGCTGAAGTATGCAAGTGACCGTCTCGTGTCCCTGGAGCATGAAGAACAGTCACTATCAACAGGGGTGGAGCTCGAGAAGACCCATATTAAGACCCTGGAAGGTGTCTTGGATATAGTCCAGAACATGATAGACAAGAGTGACAACAAGGAGGACTCCCTGACTTTGGACCAAGCCGCAGAGGCCTTCAAGGAGCTGCAAGAAAAGTTCTATGAGGAATATCGTCTTTATGAGCTAGGGGAGTTGGCCGTGAGTTTGGTAGCACCCCTTGTCAAGGAGAAACTCAGCACTTGGAGACCCTTGGAGAGCCCCACAGAACCCCTGAACCTCTTCACACAGTGGCGGGAGATACTTCAGGCCGACCAAGGGGCTCTCTCGGTTACACAAGACCCCTACCACAAGCTGCTCTGGGAGTCTTGGATGCCGAGTTTACGGATCACTGTCAGCACTTGGAATTGCCGCGTGTGTGAGCCTCTGGTGGACTTGATCCAAGTATGGATCCCTCTGCTGCCAGGATGGATACTAGACAACATCCGGGAACAGCTTATACTTCCCCGGATAACACAAGAGGTGGAAGATTGGAACCCCATGACTGATACAGTCCCTATCCATGCCTGGATACACCCTTGGCTGCCGCTTTTGGGTGTGCGGCTCGAAACAAGTGTGTTCCCGATGATCAGACATAAGCTGAGCAAGGCGCTGGTTAGCTGGCATCCATCTGACCGCTCGGCCCGCCTTATGCTTCTTCCGTGGCACAGGGTGTTCTCCCGAGGCGAGATGGAGGCTTTCCTAGTGAAGAACATTCTCCCCAAACTACAGCTGGCCTTACAGGAGCTGGTCATAAACCCTCACGAGCAACATCTAGAGCAGTGGAATTGGGTCATGGAATGGAAAGACCTCCTACCTCTACACTCCCTTTCTGGGGTGCTTGAAAAACACTTCTTCCCTAAGTGGCTTCAGGTGCTTACTTTGTGGCTAAACCACTCCCCCAACTACGACGAGATCACCCACTGGTACATGGGCTGGAAGAATATGGTCTCCGAGAGCCTTCGCGCCCAGCCTGGTATCAAAGAACAGTTCAACAAGGCGCTAGAGCTGATGAACCGGGCAGTGAGCTCTGGAGGACAGTCAGGGAACCAGCAGCCAGGAGCAGTTGAGTCTGTTTCTTACCTGACCAACATCGAACAGAGCCAGCTCCCAGGCCAGAGGGTTCGGGACAGAGAGTCTCGATATGAGCTCTTGGCGGAGGCGGTGAGGACAGCAAGTCAGGTGCCTCAGGGGTTCAAGGAGCTAATACAGAAACGCTGCGAGGAGCAAGGACTTCTCTTCGTCCCTCTTACCAACAGGTATCGCGAGGGCAAACAGATCTACCGTTGCGGTAATATACAGCTCTATGTTGACCGTAACGTAGCATTTGTCAGCGACAACAGCGGGGCGAGCTGGAACCCAAAGTCACTCAAAGCAGTCCTGGACATGGCTTCGTAA
- Protein Sequence
- MVSVGAHLLHLDTLLQDIIQNNQKLKYASDRLVSLEHEEQSLSTGVELEKTHIKTLEGVLDIVQNMIDKSDNKEDSLTLDQAAEAFKELQEKFYEEYRLYELGELAVSLVAPLVKEKLSTWRPLESPTEPLNLFTQWREILQADQGALSVTQDPYHKLLWESWMPSLRITVSTWNCRVCEPLVDLIQVWIPLLPGWILDNIREQLILPRITQEVEDWNPMTDTVPIHAWIHPWLPLLGVRLETSVFPMIRHKLSKALVSWHPSDRSARLMLLPWHRVFSRGEMEAFLVKNILPKLQLALQELVINPHEQHLEQWNWVMEWKDLLPLHSLSGVLEKHFFPKWLQVLTLWLNHSPNYDEITHWYMGWKNMVSESLRAQPGIKEQFNKALELMNRAVSSGGQSGNQQPGAVESVSYLTNIEQSQLPGQRVRDRESRYELLAEAVRTASQVPQGFKELIQKRCEEQGLLFVPLTNRYREGKQIYRCGNIQLYVDRNVAFVSDNSGASWNPKSLKAVLDMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01444783;
- 90% Identity
- iTF_01444783;
- 80% Identity
- -