Tpod053586.1
Basic Information
- Insect
- Timema podura
- Gene Symbol
- dl
- Assembly
- GCA_033556935.1
- Location
- JAVRXN010000012.1:63424529-63428581[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-57 1.3e-52 180.0 0.1 1 123 68 191 68 198 0.97 2 2 1.4e-05 0.44 12.3 0.0 143 169 189 216 188 216 0.92
Sequence Information
- Coding Sequence
- ATGTGCCGGTCTGTGATTGGTGTTCTAGATGTTTCTGGTGTAGCGGGAGTAATGGAGCGAGACAGTCTGGGGAACAATCTCAACATAAGTGATATTATTGAGGTCATCCAGATGGACCCAGACTTCCAAGACGGTGAGCCGCTGTatggtggagggggagggggtaccAACATGGAGGACGCAAGGAAAAGATCCGCTCATGTCAAGATATTGGAACAACCAGCGTCCAAAGCGCTCAGGTTCCGTTACGAGTGCGAGGGCCGCTCGGCTGGCAGTATACCTGGCGTGAACAGTACGCCGGAGAACAAAACCTTCCCCAGTATACAGGTTGTAGGGTACAAGGGCAGAGCAGTGGTGGTTGTGTCGTGTGTGACCAAGGATCCTCCATACCGTTCTCACCCTCACAACCTTGTGGGCAAGGAAGGGTGCAAGAAGGGAGTGTGTACCGTGGAGATGAACAGTGATAGCATGGCTGTGAGCTTCTCCAACCTCGGTATCCAGTGCGTCAAGAAGAAGGACATTGAGGAGGCGTTGAGAGTTCGAGAGGAGATCAGAGTCGATCCTTTCAGAATGTTCCTCGAGGGCAACGAGAAGGGAAAGTTCACCTTCCAACTCCCGCCCGTCGTCTCTGAGCCCATCTACGACAAGAAGGCGATGTCCGACCTTGTCATCTGTCGACTGAGCGACTGTTCCTGCACAGTGGCGGGAGGCAAGGAGATTATTCTACTCTGCGAGAAGGTGGCCAAAGAGGACATACAGCAAGTGGCCATCACGTTCAGGACACCGCATTACCGAACCATCGAGGTGGACGCTCCCGTGAAGGCGTTTGTCCAGCTGCGTCGACCGTCCGATGGGGCGACCAGCGAGCCTCTTCCCTTCGAGTTCCTGCCTCTGGACTCAGGTAGGCCTACGTTCTGGTCACTGCGCAAGGCGCTAGTCAAGAAGGGGAACTATGCCATGTTCTCGAGTATTCTCGCCTCCAACACTGCCTATTTGACTCGCCAAGTGGGATCTGGGTCCGAACAGCAGCCTATGAAGGTTCCTCTCAACGCAAGTAAAGTAACCTTTGCAGAGCCTTGCATAGAGGTCGAGGAAACAGTTTTGTCCGATGATGTACAAAATGGTTCCCCCGAACCATTATTAGAACCAGTTGAAGAGAAAGATGTCAAGAGTAAAGATATGGACATTGAGCCACCTCCTCAGGAGGATATGATAACAGAACAAGAGCCTGTCGACGATTACTCCCAAGTGAACAAGTGGGATAGAATACAGTCTCATGAGGATGATAACGGTAATATTGAATCTTCGACAACTTACGAGAAAGATCCTCTCCAACTCGATACCAGGGACAGCATTGAGGATGTTTTGTCTGAGGGTGAGACGAATCGATCACTCAACGAGCTGCTGTCGCAGGTCGCAGAGCTGGACGACATCTACTCGGATACCCGCGCCAGATGGACGCTCGCCGGAAGATATAGAAATGGGAGTAGAAGATATTTTGATGACAGTCAAACATACTCTAGCTTACAACTTGCCATGAAGAATCCAGTAGAGCTCCTTGATTTTGTGACCGGTCGCTACGAGGATGTCACCCCTCCCACTTCCATACAGCCACCGTTTATATCTATAGCTCCGTTGTCTAAACCGGTGATTCCTCCACATTTAAACATCGCAAAGAGAGAAAATACAGGGCTGAGTTCTCTAGACTCTTCAGACTCAAAACTACCCCCGCTGCCTCCAAAACGTAGCCGGAAAGAACCCCCTACCCCTCCAGCTCGCCCAGAGCACCTGTTGAACTACGAACCCCCCATTGTCGAGTCTCCAACACCAACACCCGTTCATGCGCCCAATAAGAACTTACCGGAAACACCCGCACTCAACGCCAAAGTTAACAAACCCAATctgtttcaaaaattgttttctaaaaaatcatcaaaatctgTCAAAAAGGAGAAGTTAGTGATCACTCCTCGCGGGAGTGTGGGTAATATCTCTATCACGGAATCTGGGGCAGTGACCCCACCAGAGTTGACGGAGGCTGAGCACTATGCGCTATACACAGACATGGCGCCACACGCCACTGCGTCAGAGTTTGACGAGACGTCCTTCTATTATAGTCCTGTGGAGGGAGGACGTATTTTAGCCGGTGGGGAAGAGACTAGAGTCATGCTTCAGaccaataaaaatagaaatatatcaaCATAG
- Protein Sequence
- MCRSVIGVLDVSGVAGVMERDSLGNNLNISDIIEVIQMDPDFQDGEPLYGGGGGGTNMEDARKRSAHVKILEQPASKALRFRYECEGRSAGSIPGVNSTPENKTFPSIQVVGYKGRAVVVVSCVTKDPPYRSHPHNLVGKEGCKKGVCTVEMNSDSMAVSFSNLGIQCVKKKDIEEALRVREEIRVDPFRMFLEGNEKGKFTFQLPPVVSEPIYDKKAMSDLVICRLSDCSCTVAGGKEIILLCEKVAKEDIQQVAITFRTPHYRTIEVDAPVKAFVQLRRPSDGATSEPLPFEFLPLDSGRPTFWSLRKALVKKGNYAMFSSILASNTAYLTRQVGSGSEQQPMKVPLNASKVTFAEPCIEVEETVLSDDVQNGSPEPLLEPVEEKDVKSKDMDIEPPPQEDMITEQEPVDDYSQVNKWDRIQSHEDDNGNIESSTTYEKDPLQLDTRDSIEDVLSEGETNRSLNELLSQVAELDDIYSDTRARWTLAGRYRNGSRRYFDDSQTYSSLQLAMKNPVELLDFVTGRYEDVTPPTSIQPPFISIAPLSKPVIPPHLNIAKRENTGLSSLDSSDSKLPPLPPKRSRKEPPTPPARPEHLLNYEPPIVESPTPTPVHAPNKNLPETPALNAKVNKPNLFQKLFSKKSSKSVKKEKLVITPRGSVGNISITESGAVTPPELTEAEHYALYTDMAPHATASEFDETSFYYSPVEGGRILAGGEETRVMLQTNKNRNIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01446265; iTF_01450242; iTF_01445424;
- 90% Identity
- -
- 80% Identity
- -