Tmon021776.1
Basic Information
- Insect
- Timema monikensis
- Gene Symbol
- -
- Assembly
- GCA_902151445.1
- Location
- CABFVZ010000844.1:264005-287389[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 2.6 5.4e+02 3.4 0.8 2 23 884 906 883 906 0.89 2 9 0.11 23 7.8 2.1 1 20 1246 1265 1246 1269 0.94 3 9 0.99 2e+02 4.8 1.7 1 23 1276 1299 1276 1299 0.79 4 9 9.6e-06 0.002 20.6 0.6 1 23 1305 1327 1305 1327 0.94 5 9 0.00092 0.19 14.3 0.3 2 23 1339 1361 1339 1361 0.91 6 9 3.5e-05 0.0072 18.8 2.7 3 23 1369 1389 1367 1389 0.96 7 9 0.0037 0.77 12.4 2.9 1 23 1395 1417 1395 1417 0.98 8 9 0.014 2.9 10.6 3.2 1 23 1423 1446 1423 1446 0.98 9 9 0.7 1.5e+02 5.2 0.4 1 23 1455 1477 1455 1477 0.96
Sequence Information
- Coding Sequence
- ATGTTGAACCATGAAGCAAGAGTAGATAAAATGGCGCCCCCAGATCTCGACAATCCTGTTCGTAGTTTGAGAAATTACAAGTTTGAAGCGCTGAATCGTCGCTGTGAAGTCAGAATAGACACATGCAGACAGTCAATAGTGGCATGTGCTCATTTAAAAGACAGTGAAGAAGGAACATTAATTGAAAGTTTACATTTCTCAGAGAATTCTAATAATGCTGTAGGAACAGAGACGTCGGTTATTTGGTCAAATGAAGGAATTCTACGACAGGCTCTCATGTGTTTCAACTACCCTCATGAAGAAGTCAAACCTTCAAAGAATTCAATACCAACAAAGTTGACATCGGACCTCATTCATTCTAAACTTTCAACACCTTTGTTTTCTGAGTCTTTTGACATTAATACTAAACTATCTCACTCTCCTCCAAAGTCTCTTACACCAGAGCTAACTCATTTAAGCACACACACCTTATCCAAATCAAGTCCTCTAATCTCTGGTGGATTATCTTTAGAAAACATTTCCCTAGTGTCTGATTCATTTAGTCAAGATGGTAGACATACATCCCTTCTCCATTCTCTTCCACATGTATCAGAAATTCCTCGACCAGGGAACATTTTGCCAACTCTATTGTCAGCCTCTAGATCTGATTCTAAAACTCTCCCATCTTTGTCATGCCCCTCAGATGTCACCACAACATCCAGCATTATCACTACAATCCCATTTAATAGTCGACCTGGTAGTGCACCTATACTCTCGGAAATAATATCGCCCCTTCAGACCACTGGGGGTTCTCCTCTCAAAGTTATATTACCTGCCACAACTCTAACAGGTAATGGACAATCTTTTTTGCCCTCAGTTTCACCTAGAGAAGCTGCCGTCACTGTGGTTTACTCAGCGTTATCAAAAGGGGAATGTGCTAGTCAAACTCACCAGACTCCGATTTTATTATCATCTATAATGGATGTGAAATCAAATTGTTCAAATGATTTGAATTCCATGCATAGGCAAATAAATTCTAACAATAGCATAAGGAAAACCTCACAACCTTTGCCATCTCATGTTCTTTGTGTTGATCACACCAGTGTGATAGAAGGTGATGTTGCACCTTCTCTTCTTAATAATAGGATGATTCCTGTTAAAGTTTGTGATAGCTCGAATATTACATCTAATGTATCACAAACTATAACTTTACCATCTCCCTCAGCCCAAACAGTTAAATCTTGCACCAACGGATCGTTGTTGGACATAAACTCGGGCATATATATTCCTGTTTCGAGTAAAATACTTGATTCCAAACTTGATAGTCTTACAGCACTTAGCGATAACAATCAAATCATTACCATCCCACTGACTTCTAGCACAATCTACAGTCATTTGCCAATTTCTATACCAGTTTCATCAAACTCATTATCGTTTCCTATTCTGTCTTGCACTTCAAACTCTTCAGCTCAAGATAAAATTACACTTTCATCAAACCACAACTCATTGCAGATTCAAACTCATGACTCAATCACTTCAACCACAGCTAATGACAAGCAAAGATATGCTCAGAAAATATCTGAAATATCTCCCACCACAACACACTCTTTAATTTGTAACAATATTCATGACAATGCTAGTTCAGATTCTCTTACCTCCTCACTGACAAATGATCTACCGATCACTTCGGGCACAAATACTATCGCTATCACATCCAATTCTCTCATTATATCTTCGTCTTCTTCATCGGTGCTAACCACCTCGGAAATAAATTCATCGACATCACTGGACTCCAGTTCCTTCGCTGTACAGTCGCCGGCAGAGATTCTGTCGCAACTTTCCAAAGCGGGAGTTTTGCCCGCTATGAGCAGCAGCCAAGTGTCTTCGGTATTGTCAGATCTGGGGCCAGACAATGATCTTGATCTTGACGGTGACTCAGCACATCATGAACTTATGTCACACCAGATACATCTGTCGGACTCACCAGATAAAGTTTCTTCTCTTGCTCAAGCTGAAGACTTAGAACTCGGGCATACAGTGTCTAGCGAAGATACCCTCATTGTGCAACATGTCATGCACATGTTGAATCACCAACATGAGCAAGCACTACCACCTAAACCCCCCGATATTGATCCTTCCACTCACAATATCCTCCACAACTCATCAGGCCTCATCGATCACTCGGAGAATACAAACCCACTCCCGCCAATATACAAAGCAAACTCTGTCAGCAGGGATGTCCCACCCAACATGCGGCTTGTCAACACTCCGATGAATGAACTTGGAAGTCAAGAGCATCGTTCATTGCGACAGTATGTCTTTATCAAGGAAGAACACACTGAAGCCATACTTAATTCAAGGAATAAATCTGAAATAATTGAGGggaataaaagtgtaaatattagcaatattttatgtcaagATAAAGAGTCAATTCAAGATCAAGAAACCATGTCAGAATCGTTGAGtactaaagaaaacaaaaaacgtAAACGTGGGGTAGATGCTCTCGAACAACTtgattttaccaattttattgAAGAAGTCTGCACGTTCAAGTGTAAGTTCTGTTTCTTTCTAAGTCTCAAGAAAGAGGGTGTATGTTTACACCTTAGGCAAGAACACTTGGCCCAAATGACTGGTGGCAGAGGGGAGTTAAAACGTAAACTCAAGTGCCCCGGGTGCCCAAATGTGTTTTTCTGTATTAAGTCTCTGAGGGTGCATTTATCGCAAGATCACCAAGTAGGAGATGCAGAATTAAAAACCATTGTAGAGACTGTTGTAAATGGGACCAACCAAGTAAAGGttgtaaaaaagaaaacaaaaaagaaaacaagaaaaGATCAAGATTGTGAAAGTGTGGATGAAGTGGATGGTGTTGAGgacaaaaacaatgaaaaatctCAGGACGCTAGTGTGGATAGTCAAAATAAAGTGCCAGTCATTGATATTGACAGGACAACATCACCTCTTCCATTAGTTTCCTCCGCCAGTGAACTGCCTGGGATAAGAATCATTGATGTTAGGGGGTCAGGAATGTTGGCCCCCAGTCCTGAATTAAACCCTGGTACGGATGAGAGTCTATCTGAACTACCGGCTTTAGAACTCGGCATGAGGGCGGAGATGTCGGTTCTTGACCAGGTCAGTAAACTCACCAAAGTAAATTCAGACGTTTTTATGGGTAGCTCTAGACCTGAAAGCGTTGGCAGCTTGTGCGGCTACACGGAAGAACCGAGTAAAATTCGTGTGCGTAACCTGAATAGTGAAAGTAGTGTAGTGAACAGTATGGATGACAGAGACTCTGGCCATGTTGCTCAATTGCATGGTTTACAGAACGACCTTGGAAGAGACAAGGATACACCTGGTAAGATCAGCGACATTTCCGATGATGAAGCACGGGAGGATGGTTTGGTGATTGATGATGACTCCTTTCTCCACCAAAAGAAATTGTGCTCTGTGGATAGTTCTTCTCAGTATGAGGATATCAAGTCTGAGAGGTGTAACAGCAAGTACGAAGCAGGTATCTGCAACGAACATGAAAAGTCCCAGGATATTAAGAAACCTGTTCCGATCACAACTGTGAACAACATCCAGCCAGCTTTTGTCAGGAAGCGGGGCCGGCCCAAAGGTTCAGGTCAACGGCACCAAGACCGAGGGGGCGAAATCAGAGAAAGATGTGACGTGATGGGCTGTGCGGTACGGCTCCACTCCCATGACAAAATAGAGTACCACCGACGGTGCCACCAAGAGGCAGTCTTTCAATGCCCGGAGTGCTCACACTCTACTTTCCATTGGAACTCGCTGAGCAGCCACCTTTGGCGAGGGCACGCTATCGACATGGAACTGTACTCTTGCAACCAGTGTGATTATAAGACCATTAGTCACAGCAAGTTGGTCAACGTGCACTCTCGTATTCATGGTGATGAAAGGCCATTCCTATGTGATATTTGTGGAAAGGGTTTCAAGAACCCAAAACAACTCAGAAACCACAAGGTGACTCACTCGACCAAACAGAAGCCTGTGATTGCCAAGGGGGAATGTGACATCTGTGGGCGGACATTTGGTAATCAGCGCATGCTACGGCTACACAAGGACAACGTGCACAGCCGGCTACGACCCCACCTCTGCAATTATTGCGGCTATTCGGCCTCCTCAAGATCCACACTCAAGATGCACATGAGGACACATACCGGAGAGAAGCCATTCCAGTGTGAAGAATGTGAGTATCGCACAGCTGACCATAACTCTCTGAGGCGGCACAAGATGAGACACTCAGGAGACAAACCTTACAAGTGTCCACATTGCGCGTATGCCTGCATCCAGGCCAACACTTACAAGGCGCATCTCAAGAGCAAACACCCAGGTCTAGAGTCCAGTTTAATGTTCAGCTGCTGGATGTGTTCGTTCAGATCTGTGAAGAAGGAAAACTACCTAGCTCATGTAGCCAATCATGAGACAGGAGCGATCCCTAATCGAAGGGTCACCCACTCCCCTCAGGCTTCTGAAGCTGCTCCAAAGAAGTCTGCTAAGGAATCGCCGGTGATCATAGATCTGACCTCCCTTCACGATGTCACAGGTTCTTCTGACAGTCAAGAGGCCTTTCCAGACTCTAATGGTGTAGAAGAAGACGGTGCTGAGAATATTGAGCTGGTTTACTCAAGTAGTTCTGTTGTAGAGGAGCTGATACAGCAAGCACCCAGTGGTGTGGGTAAAGACGGTGAGACATTCGTAGTGGAGATGGAGCCCCAGTCGGTGATTCATCTTGCCCAGGCTTCATCGCTGTTGTCTTCTAGTAACTGCCAGACACTCAAGTCCTCCGCCAGCCTCGACGGGATGATCATGATTCCCCTGAGTCCTGAGTTTGAGGTGGAAGCGGAAGAGATCACCGGAGACATCAGAGAGTCTCAAGATCTTAAGTTCAAGAGCCTACCTCAAGAGTTCAAGAGCCTGCCTCAAGACCTCGGTTTCAAGGTTATGGACGATACATAG
- Protein Sequence
- MLNHEARVDKMAPPDLDNPVRSLRNYKFEALNRRCEVRIDTCRQSIVACAHLKDSEEGTLIESLHFSENSNNAVGTETSVIWSNEGILRQALMCFNYPHEEVKPSKNSIPTKLTSDLIHSKLSTPLFSESFDINTKLSHSPPKSLTPELTHLSTHTLSKSSPLISGGLSLENISLVSDSFSQDGRHTSLLHSLPHVSEIPRPGNILPTLLSASRSDSKTLPSLSCPSDVTTTSSIITTIPFNSRPGSAPILSEIISPLQTTGGSPLKVILPATTLTGNGQSFLPSVSPREAAVTVVYSALSKGECASQTHQTPILLSSIMDVKSNCSNDLNSMHRQINSNNSIRKTSQPLPSHVLCVDHTSVIEGDVAPSLLNNRMIPVKVCDSSNITSNVSQTITLPSPSAQTVKSCTNGSLLDINSGIYIPVSSKILDSKLDSLTALSDNNQIITIPLTSSTIYSHLPISIPVSSNSLSFPILSCTSNSSAQDKITLSSNHNSLQIQTHDSITSTTANDKQRYAQKISEISPTTTHSLICNNIHDNASSDSLTSSLTNDLPITSGTNTIAITSNSLIISSSSSSVLTTSEINSSTSLDSSSFAVQSPAEILSQLSKAGVLPAMSSSQVSSVLSDLGPDNDLDLDGDSAHHELMSHQIHLSDSPDKVSSLAQAEDLELGHTVSSEDTLIVQHVMHMLNHQHEQALPPKPPDIDPSTHNILHNSSGLIDHSENTNPLPPIYKANSVSRDVPPNMRLVNTPMNELGSQEHRSLRQYVFIKEEHTEAILNSRNKSEIIEGNKSVNISNILCQDKESIQDQETMSESLSTKENKKRKRGVDALEQLDFTNFIEEVCTFKCKFCFFLSLKKEGVCLHLRQEHLAQMTGGRGELKRKLKCPGCPNVFFCIKSLRVHLSQDHQVGDAELKTIVETVVNGTNQVKVVKKKTKKKTRKDQDCESVDEVDGVEDKNNEKSQDASVDSQNKVPVIDIDRTTSPLPLVSSASELPGIRIIDVRGSGMLAPSPELNPGTDESLSELPALELGMRAEMSVLDQVSKLTKVNSDVFMGSSRPESVGSLCGYTEEPSKIRVRNLNSESSVVNSMDDRDSGHVAQLHGLQNDLGRDKDTPGKISDISDDEAREDGLVIDDDSFLHQKKLCSVDSSSQYEDIKSERCNSKYEAGICNEHEKSQDIKKPVPITTVNNIQPAFVRKRGRPKGSGQRHQDRGGEIRERCDVMGCAVRLHSHDKIEYHRRCHQEAVFQCPECSHSTFHWNSLSSHLWRGHAIDMELYSCNQCDYKTISHSKLVNVHSRIHGDERPFLCDICGKGFKNPKQLRNHKVTHSTKQKPVIAKGECDICGRTFGNQRMLRLHKDNVHSRLRPHLCNYCGYSASSRSTLKMHMRTHTGEKPFQCEECEYRTADHNSLRRHKMRHSGDKPYKCPHCAYACIQANTYKAHLKSKHPGLESSLMFSCWMCSFRSVKKENYLAHVANHETGAIPNRRVTHSPQASEAAPKKSAKESPVIIDLTSLHDVTGSSDSQEAFPDSNGVEEDGAENIELVYSSSSVVEELIQQAPSGVGKDGETFVVEMEPQSVIHLAQASSLLSSSNCQTLKSSASLDGMIMIPLSPEFEVEAEEITGDIRESQDLKFKSLPQEFKSLPQDLGFKVMDDT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01445233; iTF_01447997; iTF_01447057; iTF_01451025; iTF_01446035;
- 90% Identity
- iTF_01447997;
- 80% Identity
- -