Basic Information

Insect: Timema monikensis
Gene Symbol: RREB1
Assembly: GCA_902151445.1
Location: CABFVZ010004910.1:14158-21430[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00023 0.048 16.2 0.4 1 23 121 143 121 143 0.97

2 14 7.6e-05 0.016 17.7 0.1 1 23 160 182 160 182 0.98

3 14 5e-06 0.001 21.5 2.4 1 23 188 210 188 210 0.99

4 14 2.1 4.3e+02 3.8 0.1 1 23 336 360 336 360 0.82

5 14 0.12 24 7.7 1.4 2 22 366 386 366 389 0.89

6 14 5.4 1.1e+03 2.5 0.3 1 20 450 469 450 471 0.80

7 14 0.014 3 10.6 0.1 1 23 649 671 649 671 0.97

8 14 0.019 3.9 10.2 0.3 1 23 679 701 679 701 0.99

9 14 0.0019 0.39 13.3 2.3 1 23 707 730 707 730 0.97

10 14 0.0011 0.23 14.1 2.1 1 23 890 913 890 913 0.95

11 14 0.0043 0.88 12.2 0.3 3 23 1208 1228 1207 1228 0.98

12 14 0.022 4.6 10.0 5.1 1 23 1234 1257 1234 1257 0.97

13 14 0.0017 0.35 13.5 2.1 1 23 1299 1323 1299 1323 0.96

14 14 0.63 1.3e+02 5.4 1.3 1 23 1440 1462 1440 1463 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00023	0.048	16.2	0.4	1	23	121	143	121	143	0.97
2	14	7.6e-05	0.016	17.7	0.1	1	23	160	182	160	182	0.98
3	14	5e-06	0.001	21.5	2.4	1	23	188	210	188	210	0.99
4	14	2.1	4.3e+02	3.8	0.1	1	23	336	360	336	360	0.82
5	14	0.12	24	7.7	1.4	2	22	366	386	366	389	0.89
6	14	5.4	1.1e+03	2.5	0.3	1	20	450	469	450	471	0.80
7	14	0.014	3	10.6	0.1	1	23	649	671	649	671	0.97
8	14	0.019	3.9	10.2	0.3	1	23	679	701	679	701	0.99
9	14	0.0019	0.39	13.3	2.3	1	23	707	730	707	730	0.97
10	14	0.0011	0.23	14.1	2.1	1	23	890	913	890	913	0.95
11	14	0.0043	0.88	12.2	0.3	3	23	1208	1228	1207	1228	0.98
12	14	0.022	4.6	10.0	5.1	1	23	1234	1257	1234	1257	0.97
13	14	0.0017	0.35	13.5	2.1	1	23	1299	1323	1299	1323	0.96
14	14	0.63	1.3e+02	5.4	1.3	1	23	1440	1462	1440	1463	0.95

Sequence Information

Coding Sequence: ATGGGAAATGAAAGCATACATCAAGAATCCTCTCAGACTGATAACAAATATGTAAGAAAACAAGAATCCTCGAATCTACAAGACACGGGAAGAAAATCCTGTGAATCAGACATCGATACTTTAGAACATGACAACGAATGTGAAAAGTTACCCAATAACAGCACAGATAACAAACCGTTTGAAGTTGCTAGTAAGGAATCCATAGCAATAAACAAAGTTTATGAAAGACTCAAAGATATAACTGAAGCAAAAAATGATAATGATAAGGATTGTGAAAGCTTGGATATGCCAGAAAATTGTTCTCTTGATTGCCTGTCCCCAAACAGTGAAAATAGTCAAATGGATGATTCAGATATGAAATTTGCCTGCCCAATCTGTGACATGATTCTATCTTCCCAGCATGAGTTTACTTTACACATTCGCTCACATAACAATAATGCAGAGTCATTAGTTTATCCTCTAGCATGCTTGAAGAACTACACCTGCCGTATCTGTGGCAAAGGGCTAAGTTCATCCAGTTCATTGGATCGTCATGTGTTAGTCCACTCTGGTGAGCGGCCATTTAAATGCATGACTTGTGGTGTTGCTTTTACAACAAATGGAAACATGCATAGGCATATGAGGACCCATAATCCCTCCCATGTGGAGGATAGTTCGGTTTTGATTTCCAAATGTGAATACACCAGTTATGAGAGTGATGGTAGTTCTGATAGTGTAGGATCAAGCAATAGCTTATCTGACAATCCAAGGAAAAGTCCTCATTTAGACACTTCTCAAGCTGGACCTGCAAAAAGACGAAGAGTTGATAGTGACGGTTTTCTTATTGAATCTAACAACAACACCAATAAACTTTCTGAGCcattatcatcattaaaatCGCATGTAGAGAATGGAATCAAGAGAAAGGCTTCCGATTTGCTGACACCCCCTGATTATGAAGGAGAAGAAATTGTTAGGAGGAACGTAAACCCTGTTACATATCATCAAAATGAATTTGTTCAACAATTCCAATGTCCTGTTTGTAAAAGAATTGATTTTGCATCGTTGTATGTTTTAGAGACACATCTTGAAGAAAGGCATCCTGATTATAAGGCCACGTGTTATCAGTGcgacttaatttttaaaaatcatcgaGCTTTAAATCTTCATCGTTTCATGGCCCAACATGATAATAGTGAAGAACACAACATTGTAAGGGCTAAGAAGAGTAAACATATTAATAGAGCATCCTCTGTCTTGGGTTTCAGAGACCTAACATTTGTAGACTTTTCTAGTGAAAAGTTCCCATACATTGCAAAAGTAATGTGTGAACAAAGTATGCATAGAGCAACTAGTGCCTTTCATAAGTTCCAATGCCAAAAGTGTGCAAGAGCTTTTCCATGTGGTAGTGCCTTGAGCATTCACCGCCAGGCGTGCTTGACTTCACGTGAAAAAGTGGATTTCAACCACACATATGACCATGATAGTTTTCATGGAGATGAATTTCCATCAAGTGACTGTGATACTCCAACAGATCTGAGCAGCAAAAAGAAACCTACACAGCATTTACGATACGAAAAATCTTCAGATTGTGAGTCTGAAGAAGAACAAAAAAGAGAAGATTTTTTTGCCCATTTAGATCTGCAGACTAAATCAGTGTGTTTATCATCACCATTGTCTTCAGAAGATTTCCGTAGGGATGAGAGGTTTGAAAATGATTCTTACTTTAATTCTGTCAATGGTAATAAATGTGATAATGGAAAAGATCTTGCAGATATACAGAGCATTATATCTGTCACATCAGCAGGAGGGCTGCTTaatgatttatcaaaatctccaCAACCCAATGGAAATGATATAACACCTCCAGATTCTGGGATAAAATCCTCAGATTCAGGAACAGGGGAAGAAGAACAGCAGGATTGTTTTGCATCAGAGTTTCGTAAAATGAAGTTAAAAGGGGAATTTCCATGCCGTGTATGTACTCTCGTGTTTCCAAATCTACGTGCTCTCAAAGGTCATAATAGAGTTCATCTTACAGCCAGCTCAGGACTGTATCGGTGTAACATGTGCCCATATTCCAACATCGATAAAGGAATCCTAGTGCGACACATGCGAACTCATAACGGGGACCGACCATATGAATGTGCTCTCTGTAATTACGCATTTACTACCAAGGCAAATTGTGAAAGGCATCTGCGTAACAGGCACTCAAAACTTTCTCGAGATGACGTAAAAAATTCCATTATCTATCATCCTTCAGAAGATCCTATAAATGACCCTGAAATTCAGCCAAAGCTAACCACTCGGGAAGATGTGAAGAGATCTTTAGTTTTCAGCACCAACTTGTCAACTGATGAAACCAATAACATAGATCTCTCCAACCAAAGCTTTACAGAGGAACATCAAAAAGATGGTCAAACAAAGTTGCATGAAATTTCAAATAGACTCTCATTTACTGATAATGAACCAAATACTATAGGTAAACCTACCTTGGATGATCACAATGAAGAAATAAATCATACACCAACATTTTCAGTTAATGCTCTACCAAAAACTCTAGTCCCTATAACAAATATAGCTGATTCTAACAACAAACAGATTCGTCCGTGGGTAACTCATGAAGTTGCAACAATGACTCATTTCAGAGACAACACGAAGCAGAGAAGGTATCGAACTGAGAGGCCATTTGCATGTGAACATTGTTCTGCACGATTCACTCTTCGCTCTAATATGGAGAGGCACATAAAACAACAACATCCTCAGTTCTGGAGCCAACGCCAGAGAAACAGTTCTGGATCTGTTGGACGCAGAAGTCATCCAGCAGCAGTGCCGACTTCTGTCAACCAGGTTTTGACCACTCAACAGTCTCAAGACTCTAGGAGTTCAGTGGATAGTTTCAGTCAAACTTCATCAAAAGGATCtcatttttctataaatgttgTTTCAAGTGACCCAACAGATTATAGATCCATGCCTTTACTTGAATGGAGGGGTAGTGAAAAGATGCCAAAGATAGAAGAATCCTACACCGAGGAAGTGTTGGATAATATTCACAAAACCAAAGATATATCTAGTGTTGGTGCtatcaacaatttaaataatatagctttTATTTCTGAGGAAGTAAGGTTTGCGATATCTCAGCAGTTAAAATCAAAACTACACCAGCCTCCCGCAGTACCTCTAGGAGAGATATCTGGCATAAAATGTGAGGCACGCGGTGACATGGATGAAGAAGATGAAAATGATGGATTGGTGATTGATGAAGAAAAAGGTGAAGTTGAAGAAGGTAATGAAGACGGTAACCAGAAAGGGGTACAAACCAAAGAACAACAGAATGGAAGTAGGGATGAAGGAGTAGTGGATCTGGCAAGTGTATCAAGACTTTTGGACAACGCCACTACACAGAATCAAGCATTCCAGCAGTATTTCCAGGGAACACAAGATGCTGATGGGGAAGAGGAAGGAACTGAATACGGAAGGGAAGAAGCTAGTGAGGATGATGAAGAAGGACTAGTAGCTGGAAGCAATAGTGAAGGAAACAACTCGGGCAGTGACGAAAACAGatctgAGTCAGATATAAATCCAGGTacagaaaaaaagaagagtgCGTACTCCCTTGCACCTAATAGAGTCGCGTGCCCATACTGCCTTCGCAAATTTCCGTGGTCCTCATCTCTGCGTCGACATGTGTTGACACATACAGGACAAAAGCCATACAAGTGTCCACATTGTCCACTACTGTTCACCACAAAGTCAAACTGTGACCGTCATTTGCTCAGAAAACACGGCAGCACATCAGCCACAACTTCTAATAACAGTAACAACGGTATCGAGACATCTCAAGGAAACGGGACTCCTACAGGAGCATCAAATCCAAGCTATACGATGAGAAACGTTCCTGAGAGGCCTTTCAAGTGCAATTTCTGTCCAAGTTCTACGTTCTCGACGCAGAGCAACTTGAAGAAACACGTCGCCACCAAGCATGGTAGCCACTCTTGCCCGATAAGTCCTGCAGCTGCTACCACTAGGAACACATGTTCCTCTGGGGATGAGACCTATCATCAAACAACCAGAACAATTGATAGTCGTGGTGGTGGAGATGATAGCCATGATAGTGTAAATGAAGATGTATCAGATGAAAGGTTGACATATCCTAATCCCGTAAACAGAACCACTGATATTGGTGAAGGGGATATCGAGAGCGTGCTTGGTCATCCTGCAATAGATCTGAGAACTAGCATTCCTTCACTTGGAGCTACACACGATAGTGTTGTGCCAAAGACTTCAATAGCGCTCGAAATCCATGGATCTACCACATCTTCGGAGCTACCTTTTAAATGCCACTTGTGTGAAGGAAGTTACGCAGAAAGACAGGAAGCTTTGGATCATATCCGGGAACATCACCCTACAGAGTTTGATCTACTTGTGACTAAAGGAGCACTGGAGGTATCTACACATGAGGAGAATAATGGGAATAGTCACATCACGTCACAGGAAGAAGGGAATGGAGGTGAAGAAAATCTGGAACAACTCAGAGGAAAGTTTCCAGACTATGCTAACAGAAAGGGTTTAACTAAGGTCAAGTGA
Protein Sequence: MGNESIHQESSQTDNKYVRKQESSNLQDTGRKSCESDIDTLEHDNECEKLPNNSTDNKPFEVASKESIAINKVYERLKDITEAKNDNDKDCESLDMPENCSLDCLSPNSENSQMDDSDMKFACPICDMILSSQHEFTLHIRSHNNNAESLVYPLACLKNYTCRICGKGLSSSSSLDRHVLVHSGERPFKCMTCGVAFTTNGNMHRHMRTHNPSHVEDSSVLISKCEYTSYESDGSSDSVGSSNSLSDNPRKSPHLDTSQAGPAKRRRVDSDGFLIESNNNTNKLSEPLSSLKSHVENGIKRKASDLLTPPDYEGEEIVRRNVNPVTYHQNEFVQQFQCPVCKRIDFASLYVLETHLEERHPDYKATCYQCDLIFKNHRALNLHRFMAQHDNSEEHNIVRAKKSKHINRASSVLGFRDLTFVDFSSEKFPYIAKVMCEQSMHRATSAFHKFQCQKCARAFPCGSALSIHRQACLTSREKVDFNHTYDHDSFHGDEFPSSDCDTPTDLSSKKKPTQHLRYEKSSDCESEEEQKREDFFAHLDLQTKSVCLSSPLSSEDFRRDERFENDSYFNSVNGNKCDNGKDLADIQSIISVTSAGGLLNDLSKSPQPNGNDITPPDSGIKSSDSGTGEEEQQDCFASEFRKMKLKGEFPCRVCTLVFPNLRALKGHNRVHLTASSGLYRCNMCPYSNIDKGILVRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKLSRDDVKNSIIYHPSEDPINDPEIQPKLTTREDVKRSLVFSTNLSTDETNNIDLSNQSFTEEHQKDGQTKLHEISNRLSFTDNEPNTIGKPTLDDHNEEINHTPTFSVNALPKTLVPITNIADSNNKQIRPWVTHEVATMTHFRDNTKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWSQRQRNSSGSVGRRSHPAAVPTSVNQVLTTQQSQDSRSSVDSFSQTSSKGSHFSINVVSSDPTDYRSMPLLEWRGSEKMPKIEESYTEEVLDNIHKTKDISSVGAINNLNNIAFISEEVRFAISQQLKSKLHQPPAVPLGEISGIKCEARGDMDEEDENDGLVIDEEKGEVEEGNEDGNQKGVQTKEQQNGSRDEGVVDLASVSRLLDNATTQNQAFQQYFQGTQDADGEEEGTEYGREEASEDDEEGLVAGSNSEGNNSGSDENRSESDINPGTEKKKSAYSLAPNRVACPYCLRKFPWSSSLRRHVLTHTGQKPYKCPHCPLLFTTKSNCDRHLLRKHGSTSATTSNNSNNGIETSQGNGTPTGASNPSYTMRNVPERPFKCNFCPSSTFSTQSNLKKHVATKHGSHSCPISPAAATTRNTCSSGDETYHQTTRTIDSRGGGDDSHDSVNEDVSDERLTYPNPVNRTTDIGEGDIESVLGHPAIDLRTSIPSLGATHDSVVPKTSIALEIHGSTTSSELPFKCHLCEGSYAERQEALDHIREHHPTEFDLLVTKGALEVSTHEENNGNSHITSQEEGNGGEENLEQLRGKFPDYANRKGLTKVK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01445928;
90% Identity: iTF_01445928;
80% Identity: -