Basic Information

Insect: Timema monikensis
Gene Symbol: lov
Assembly: GCA_902151445.1
Location: CABFVZ010001152.1:126774-137037[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00074 0.15 14.6 0.9 3 23 541 561 539 561 0.96

2 14 0.00038 0.079 15.5 2.0 2 23 568 589 567 589 0.97

3 14 5.8e-05 0.012 18.1 2.9 1 23 595 617 595 617 0.99

4 14 0.00021 0.043 16.4 0.2 1 23 625 647 625 647 0.97

5 14 0.00043 0.089 15.4 1.6 1 23 653 675 653 675 0.98

6 14 0.0044 0.91 12.2 0.4 2 23 685 705 684 705 0.96

7 14 2.4e-05 0.005 19.3 1.3 2 23 710 732 710 732 0.97

8 14 2.3e-05 0.0048 19.4 3.8 1 23 738 760 738 760 0.98

9 14 0.061 13 8.6 0.8 2 19 772 789 771 791 0.92

10 14 0.00024 0.05 16.2 0.6 1 23 802 824 802 824 0.98

11 14 1.7e-05 0.0034 19.8 0.4 1 23 830 852 830 852 0.97

12 14 0.00061 0.13 14.9 0.5 1 23 858 880 858 880 0.91

13 14 0.0022 0.46 13.1 3.5 1 23 894 916 894 916 0.96

14 14 1e-05 0.0022 20.4 1.4 1 23 922 944 922 944 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00074	0.15	14.6	0.9	3	23	541	561	539	561	0.96
2	14	0.00038	0.079	15.5	2.0	2	23	568	589	567	589	0.97
3	14	5.8e-05	0.012	18.1	2.9	1	23	595	617	595	617	0.99
4	14	0.00021	0.043	16.4	0.2	1	23	625	647	625	647	0.97
5	14	0.00043	0.089	15.4	1.6	1	23	653	675	653	675	0.98
6	14	0.0044	0.91	12.2	0.4	2	23	685	705	684	705	0.96
7	14	2.4e-05	0.005	19.3	1.3	2	23	710	732	710	732	0.97
8	14	2.3e-05	0.0048	19.4	3.8	1	23	738	760	738	760	0.98
9	14	0.061	13	8.6	0.8	2	19	772	789	771	791	0.92
10	14	0.00024	0.05	16.2	0.6	1	23	802	824	802	824	0.98
11	14	1.7e-05	0.0034	19.8	0.4	1	23	830	852	830	852	0.97
12	14	0.00061	0.13	14.9	0.5	1	23	858	880	858	880	0.91
13	14	0.0022	0.46	13.1	3.5	1	23	894	916	894	916	0.96
14	14	1e-05	0.0022	20.4	1.4	1	23	922	944	922	944	0.98

Sequence Information

Coding Sequence: ATGGAGGATGTGCCAGCAGACACAGCAACCTATCACTTCATTCAGTGGGAAAATCACTTCCTTTTTCTGATGTCAACTCTCCTAGGATACACATATAGCAAAACGTTGACTGACATAACATTAGTGTGCGGTAATGTACAAATGTTTGCCCACAAAACCGTGCTATCCATTCTCAGTCCCTATCTAAAAGTTACTCTCAGAAATAGTGGTtctaaatgtttgattttaatgGACAGTAATGAGACAGTCTTACCTATCATGTTGGATTTCATATACAAAGGCTCTGTCTCGATGGCAAGAAGTTACGTTGAACTTCTCGTTGACATGGCGGGAGTCTTAAAACTTGAAACCTTTTCAGATACTAAGATCGAGTACATAGATGATTTAGCTTACTTGTCATGGTCTAACCATCAGGAGGTCATTCTTGGTAACCTGTGGGGTTCGCGGGATGACCCTTCCCAGTGCGATTTAATTTTTGTCACGAGTGACTTACACCATGTCTACGCACACTCTTGTATTTTGGCTGCGTGCACAAAGTTTATGTTGGATAGTTTGGCCAAACACTTCCAAGTGAAAAATAAACCTTGTATATATGTTCTACATGAAGTCCACAGCCAAGATTTGGAACTTGTACTGCAATTTTGTTACAAAGGACGTGTTTCCATTGCAAAAGAAAATCTGCAAAATGTCTACAATGTCGCAGAGATGTTAAGGATTGATAACTTGTGTGAAATACTTTCTTCAATAAATCCTTTCATTAAGAATAGTTCCATCTCCAAATATCAGCGGTCCACAGGTGTTGCCACTAAGATAACATcttatgaaactaaaacattaaaaacaacagATAAACTCTCACAAATTCAAAGCGTCTTTTTAAAACTTCTTGAAACGGAGAGCCTTACGGACATCGTTTTACATAAGGACAAGTGTTATTTAAAGGCACACAGTGTCATTTTGTGTACCTTCAGTGGATATTTCAGGAACTTGGCAGAAAATATATGTGAAGATATGAAAGATATTGTTATCTTGGTGAAGGACTTGACAAGTCAGGACTTGCAAGCCTTCCTGGACTATATCTATAAAGGTGAAGTAGAGTTCTGCGGTAGTGAAGAAGAGTTCAAAGCCGTCATGTCTGGATGGATTGACTTTGACATGTTGCCAATCTGTGATGCTCAACCTTGCCTACCTTTGAGTGGTGTGTTAGCAGAGGAGTTGACCCTTTATAGCTTGAAAGatGATGAACTTTTAAAGAATGAGCATCTAAATATGGAGAGCAATATCTCGACTCTCATCAGCACCAACACAGAAAGTAGCTCTCCATTACTGGAGACAGATACATCACCTCTGCCTGAAACATATTTACCGATCTCCAATCCTAAGTGTTTGATAGCACAGGACACACCTCAAAACAAGGTCTCTTTAGCCCTGTCAGAAACATCAGATGGCATGCCCAAATTGAAGTATTGTGAGATGGAGGATGCTTCATCCATAGAAAATGGCTTACCTGGTTCTGTGAAGGATTTATCACTTAATACGGAAGACATTTTTGGATTGGAGGTTCCAGAGCACAAGAACAAGGTGGAGGAGAGACAGGAGGTGAGGAGTGGTGCGGACATTTGCCAGACTTGCCAGCTCCGGTTTGACAGCCGGTCAGACTTCAGGAAGCACCTCTTAGTGCACCCTGATGGGAAGATGCTTAGGTGCGAGTACTGCTCAAAGGGCTTCCTCAAGCCCAGCCATCTGAAAATTCACCTCCGTTCTCATACCGGGGCACGTCCATTCCAGTGCCAGTCCTGTGGGAAACACTTAATTTCTAAGAGCTCTCTCACTAAACACCTTCTAACCCACAAGAGGAACAAGGAAGATATGTTCGCATGTGATATATGTTCCAAGTCTTTCCTCACAAAGGAATACCTTGTGGAACATATACGTGTTCACACAGGTTCCAAGCCTTTTCAGTGCTCTCAGTGTCCAATGAGTTTTGTTGGGCGGACAGGTTTGAACCACCATGTAAAGAAGCATGCCAAGGGAGAAGATAAGAATGATACAGTCTGCGATATATGTGGGAAAACCTTGTCTCGACATGCCCTATGGGGACACATAAAAACCCACAAGAAGATGGAACGTTGCAACATTTGCAACAAGGTCTTCTCGACAACAACGGCTCTGAAGATTCACTCAAGGACATCCCACTTGGGCCAGAGGGACCACCAGTGTGAGaaatgtggaaaaatatttcTGCAGTGGAGCCATCTTTCCAGGCACATAAAGTCGCACACACCTAAGCCTCAGCAAACGAAGGGGAATGTCTCCTGCAAGGAATGTCTAAAGACGTTCAAGAAGGAGAAAAGTCTCTTGTATCACAAAGAATGTGAGCATAAGGAACCAGGTGAATGTATCTATCCTTGTGACTTCTGTCCGAAACGTTTTGTCGGTCGTAGTACAGCCACCTACCACATGAGGTCCCACACAGATACTCGTCCCCATGTCTGCACGAGCTGTGGTAGAGGGTTCATCCGCCCTGACTCGCTCAGGCTACATATGGCGAGGCACCGTGGTGAGAAGCCGTATGCTTGTTTGGTTTGTGGCCGCAAGTTCACCAGCAAAAGGTCTATGAACAAACATGCAGGTCTTCATAAAGCTGCACCCCCTCTCGATAAACATCTCTCTGTGCCTCATCATTGTgggatatgtaaaaaaaactttgagacAGAAGATGAACTAACAAATCACTCACAGAGCCATGTTGGTGCAAGGCCGTTTCGCTGTGCTGTTTGCCGCAAAACTTTTCGTTATCTGGATAGCCTTAAAAGACATGCTAGAGTACATTCTACGGTGGTTCCTGATGCCCCCATTGAGCTCCAAACATTGTATGCACTACAAGTCAACGGGCAGCCACTTGAACAGGTCGGTGAATTGAATGAGGGAGGAAAGTTGACCCCACAACAAAGTTATATGAGTGAGACAGTAATAGAAGTCAGTGAAGATCTTATTTCGACTGGCCACAAAGAGATAATTATTTCTGACAGTGTTGTAATGGAGGATGGAATATGTTTGTCTGTAGTAGAAGGTAAGACTAGCCTTGGTATGAGCTTGGCACCAAGGAGACCTTACAGCATAACCATTGATGGTAATCTTTGTTGTAACACTGACAACTCTGTACTCGACTTAATCCCTCAAGTCAGTGAAATCTCAGTTATTTCCCCAGTACCTCTAGAGTCTTCGCCACCACTTCACTATCCAAACAAGCCCTGGAACTTCCCGCATTAG
Protein Sequence: MEDVPADTATYHFIQWENHFLFLMSTLLGYTYSKTLTDITLVCGNVQMFAHKTVLSILSPYLKVTLRNSGSKCLILMDSNETVLPIMLDFIYKGSVSMARSYVELLVDMAGVLKLETFSDTKIEYIDDLAYLSWSNHQEVILGNLWGSRDDPSQCDLIFVTSDLHHVYAHSCILAACTKFMLDSLAKHFQVKNKPCIYVLHEVHSQDLELVLQFCYKGRVSIAKENLQNVYNVAEMLRIDNLCEILSSINPFIKNSSISKYQRSTGVATKITSYETKTLKTTDKLSQIQSVFLKLLETESLTDIVLHKDKCYLKAHSVILCTFSGYFRNLAENICEDMKDIVILVKDLTSQDLQAFLDYIYKGEVEFCGSEEEFKAVMSGWIDFDMLPICDAQPCLPLSGVLAEELTLYSLKDDELLKNEHLNMESNISTLISTNTESSSPLLETDTSPLPETYLPISNPKCLIAQDTPQNKVSLALSETSDGMPKLKYCEMEDASSIENGLPGSVKDLSLNTEDIFGLEVPEHKNKVEERQEVRSGADICQTCQLRFDSRSDFRKHLLVHPDGKMLRCEYCSKGFLKPSHLKIHLRSHTGARPFQCQSCGKHLISKSSLTKHLLTHKRNKEDMFACDICSKSFLTKEYLVEHIRVHTGSKPFQCSQCPMSFVGRTGLNHHVKKHAKGEDKNDTVCDICGKTLSRHALWGHIKTHKKMERCNICNKVFSTTTALKIHSRTSHLGQRDHQCEKCGKIFLQWSHLSRHIKSHTPKPQQTKGNVSCKECLKTFKKEKSLLYHKECEHKEPGECIYPCDFCPKRFVGRSTATYHMRSHTDTRPHVCTSCGRGFIRPDSLRLHMARHRGEKPYACLVCGRKFTSKRSMNKHAGLHKAAPPLDKHLSVPHHCGICKKNFETEDELTNHSQSHVGARPFRCAVCRKTFRYLDSLKRHARVHSTVVPDAPIELQTLYALQVNGQPLEQVGELNEGGKLTPQQSYMSETVIEVSEDLISTGHKEIIISDSVVMEDGICLSVVEGKTSLGMSLAPRRPYSITIDGNLCCNTDNSVLDLIPQVSEISVISPVPLESSPPLHYPNKPWNFPH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01450671;
90% Identity: iTF_01450671;
80% Identity: iTF_01448647;