Tmon030821.1
Basic Information
- Insect
- Timema monikensis
- Gene Symbol
- -
- Assembly
- GCA_902151445.1
- Location
- CABFVZ010001490.1:80771-82621[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-08 5.3e-05 24.9 0.1 8 39 4 36 1 40 0.89
Sequence Information
- Coding Sequence
- ATGAAAATAGCTGTAGAGAAAGTTTTAAGTAACGCTATGACAGTGAGACAGGCGGCAAATACATACGCTGTTCCTAAAAGCTCCTTAGGAGACAGAGTAGCGAAGTTAAAATTAGGAAATGAAGTAAAAATAGGTCCTGACATGGGGCGATTCAAACCTACTTTCTCAGAAAATTTTGAAGAGGAACTTGTAATACACATTAAAGACCTTGATAACCGTTTGATGCCATTGAGTCGTAAGGAGTTTGGGAAGTTGGCTTTCGATGTGGCCGAAGCCTTGAAACTTGATCACCGCTTCAACAAGAAAAAGAAGTGTGCTGGTAAGGACTTCTACTATGATTTTATGAAACGACACCCTGAAATCACATTAAGAACCGCTGAATCTACTAGCATGCAACGAGCAGTTGGTTTCAACAAACCTCAGGTTTctagattttttgaaaaatttaatcaacttcAAAGTAAATATTCCTTTTCTGCATGTAGAATTTTCAATGCAGATGAAACAGGAGTTACGTGCGTTCATTCAAATGACTCTAAAGTTATATCcataaaagggaaaaaacaagTTGGAAAATTAACGTCTGGGGAAAGAGGTCGTACGGTCACTGTGCTTCTTTGCGTAAATGCTTCTGGAGACCAATTTATCCCGCCTCTCTTTATATTTCCTAGGCAGAGGATGAACAACCGCCTCATGATTGGTGCACCCCCTGGAAGTTTGTTTGCTGCTCAAACTAGTGGATGGATAACTGGTGAAATTTTTCTGAAGTGGCTTCAAGAGTTCGTCAAACGTGTCCATCCTACTAAACATGAACCTGTGCTGCTCATTTTAGATGGTCACTGCAGCCACAAGGAGCTTGACGTGATTCTGTTTGCACGTCAACACAATGTTCATATATTAAGTTTGCCCCCGCACACAACGCACAAACTGCAACCACTTGATAGGACCATAATGAAGCCTTTTAAAGAGTCATATAATGAAGCTTGTGCTATTTGGATGCGACAGAATCCTTTTTCCAGGATAACAGATTATGATGTTGTTGGATTAGTAAGCTATGCTTTTACCAAAATTTGCCGAATGGATATAGCTAAAAAAGGGTTTGAATGTACAGGTATACATCCATATAATCCAAACATATTCACAGATTTGGATTATTTGCCATCGCAAGGACTAGATATTCCCGACTCTGTCTATGAAGACTCAGAGCTATTGAAAGATGATCCAGGAAATCTACAATCAATATCCCCTAAGACTCCACACACATCAAATTATGGACACGAAAATTTACAGCCATCATTTGAATCTCCAAGAGCCTCAACTTCTGTATCTCCACAACCTCCATTTCCAGAGTTATTTACTTCCATGACTTCACAACAGTCAACTTCAACCGTACAAACTTCAACATCAAAGACTCCACAGTCATCAACTCCTTCAACTGGATTTTTCCACACCATAATCACACAAGTGTCACCAGTGCCTGTCGCTGCAGAACGTAGGTTAAATGTTAGAagaagacgtggtgctaagagcGAAATACTAACATCAAGTCCTTATAAAGCTCAGTTAGAAGAAAAACAATTAACGAAAATGGGAAAATCAAAAACTAAGTTGGAAGTCacgataaaaaaagaaaaaaaattacatccaAATAACAGAAAAGTTAACAAAACTTCGGCACAACTTATGAGCGAAGAAGTTGAAGATAAAACCGACTGCATAATATGCGGAGAAAATTTTGACGAGGATTGGATAAAGTGTGACTTTTGCCAAGGGTGGGCGCACGAGAATTGTGCCAATACTGAATTAAATCcctctttttataaatgtgactCTTGTGAGAAAGCATCTTAA
- Protein Sequence
- MKIAVEKVLSNAMTVRQAANTYAVPKSSLGDRVAKLKLGNEVKIGPDMGRFKPTFSENFEEELVIHIKDLDNRLMPLSRKEFGKLAFDVAEALKLDHRFNKKKKCAGKDFYYDFMKRHPEITLRTAESTSMQRAVGFNKPQVSRFFEKFNQLQSKYSFSACRIFNADETGVTCVHSNDSKVISIKGKKQVGKLTSGERGRTVTVLLCVNASGDQFIPPLFIFPRQRMNNRLMIGAPPGSLFAAQTSGWITGEIFLKWLQEFVKRVHPTKHEPVLLILDGHCSHKELDVILFARQHNVHILSLPPHTTHKLQPLDRTIMKPFKESYNEACAIWMRQNPFSRITDYDVVGLVSYAFTKICRMDIAKKGFECTGIHPYNPNIFTDLDYLPSQGLDIPDSVYEDSELLKDDPGNLQSISPKTPHTSNYGHENLQPSFESPRASTSVSPQPPFPELFTSMTSQQSTSTVQTSTSKTPQSSTPSTGFFHTIITQVSPVPVAAERRLNVRRRRGAKSEILTSSPYKAQLEEKQLTKMGKSKTKLEVTIKKEKKLHPNNRKVNKTSAQLMSEEVEDKTDCIICGENFDEDWIKCDFCQGWAHENCANTELNPSFYKCDSCEKAS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01448418; iTF_01447459; iTF_01448419; iTF_01447460; iTF_01449517; iTF_01448463; iTF_01444690;
- 90% Identity
- iTF_01447460;
- 80% Identity
- iTF_01448418;