Basic Information

Insect: Timema monikensis
Gene Symbol: -
Assembly: GCA_902151445.1
Location: CABFVZ010002095.1:92707-98298[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-08 7.1e-06 27.7 0.0 3 35 49 81 47 90 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-08	7.1e-06	27.7	0.0	3	35	49	81	47	90	0.91

Sequence Information

Coding Sequence: ATGGGACGCGTTTCACGCTTGGCAGACATGAAACACACTGGTTGCCATGACGACCTGTGTAATGACAAGGCTCATTACGACCGCTCCTTTCTCCGAACTAAATTACAAAAAGAAAGCGAAGgcttaagaaaaaattataataaggaAGACATGATAAGAGCTATTGAAGCTGTTAAAGCCAAAGAATGTGGATATTTGAAGGCAGCAAAGAAATATAATGTGCCACGATCTACCCTTGCACGTCTATGTTCAAAGGTGAATGAAGGTGTTACTGTTGAGAGTGTAGCTGCTACGAAATTAGGGAGAAATACAATTTTGGGTGATGAAATTGAAAAACAACTAGTTGAATATATTCTAACAATGGAATCCAAGTTCTACGGTTTGACCACGAATGACATAAAGAAGATGGCATACCAATTAGCTGTTAGAAATGGCATCAAGCATCCTTTTGGAGAGGAAAAAGCAGGAAGAGGCTGGATAGACCATTTTTTGTCACGCCATAAGGACACGATTTCACTGCGTAAGCCTACAGGTACGTCTGCTGCCAGAGCACTAGGTTTCACTAAAGAAAGAGTGGATGCTTTTTTTGACAATCTTGATGAACAATATGAGAAATTTTCATTTACTCCCGATCGAATTTACAACGTCGACGAAACAGGGTTGTCTGTTGTGCAGTCAAAAATACCCAAAGTTGTGGGGTTAAAAGGCAAAAGACAAGTTGCTAGCCTAACTTCAGCCGAACGAGGTGGGCTGATTACTATAGTGTGTTGCATGAATGCAGCAGGGAGTTTTGTGCCTCCGATGATAATTTTTCCaaggaaaaatgaaaacaagCAGTTGATGAAAGGAGCCCCACATGGATCTATTGCTACATACCACCCGTCTGGCTGGATTCAAGCACACCTTTTCACAAAATGGTTCCAGCATTTCTTAAATGTTGCCAAACCGACAAAAGATTCTCCAGTATTGCTGATTCTGGATGGCCATTATAGCCACACCAGAAATATAGAGGTCATCGATTTGGCCAGAAATAATTTTGTGTCAATTGTGTCGCTTCCCCCGCACTCGACACACAAATTACAGCCTCTAGATAAAACCTTCATGGGTCCACTGAAGGCGTACTACAGCGAGGAAGTGCGGCTATGTTTGCGGCAACAACAAAGAGCACTGAGTCCATTCGACATTGCAGACTTATTCGGGAAGGCATATTTGAAAGTGCAAACAGCTGAAATAGCTGTTAAGGGATTTCTTGTAACCGGAATCTACCCgctaaataagaatattttctcCGACGCGGATTATATAGCAGCCGCCCAAAAAGTAGGGCCCCTATCTTTGACCACATCACCACAAATAGCACAAACTTTGCCTGCAACTGATGTTTCCCCGCAGACTCCGACTAGCTCCTGTCTATCCACATCTGCAACTCACGTCTCTCCACCGAGTCCAACTAGCGCCGGTACATCCAAGTCTGCAATGATTGCACCGCATACTCCATCTAGCTCTGGTCCATCTACAAGTGGCTTAGGGAAAACAGTCAAACCTCACGACATCTCACCTGTTCCAACAGTTAAAGCTAAAGTTACAAATCGTGGACGTAAATCATGTGGTTCCGCAGTTATTACCTCATCACCATATAAGAATGACTTACTTCGCACTACACCAAAGCGAGCTGTCACCTTATCCTCTAAAAGAAGAAAttcaaaaaatcaaaagaaGAGGCAAGTTAGGCCTATTGAATCCGAAACAGAAGAATCTTCAAGTGATGATAGTGCTTCATTAATTGATTCAGATGATTCTGATATAGATGAACCTGGCCAGCTTCATCCAGATTCACAGGATGCCAGTTGCCTATTTTGTGATGGCAAATTTTCTAACGACTCTAGGGGAGAATTGTGGGTAGAGTGTCTCCTATGCAAGATGTGGGCCCATAGTGATTGTGCTGGTGCAGAAAAAGACACCTATGTATGTGATTATTGTAAATAG
Protein Sequence: MGRVSRLADMKHTGCHDDLCNDKAHYDRSFLRTKLQKESEGLRKNYNKEDMIRAIEAVKAKECGYLKAAKKYNVPRSTLARLCSKVNEGVTVESVAATKLGRNTILGDEIEKQLVEYILTMESKFYGLTTNDIKKMAYQLAVRNGIKHPFGEEKAGRGWIDHFLSRHKDTISLRKPTGTSAARALGFTKERVDAFFDNLDEQYEKFSFTPDRIYNVDETGLSVVQSKIPKVVGLKGKRQVASLTSAERGGLITIVCCMNAAGSFVPPMIIFPRKNENKQLMKGAPHGSIATYHPSGWIQAHLFTKWFQHFLNVAKPTKDSPVLLILDGHYSHTRNIEVIDLARNNFVSIVSLPPHSTHKLQPLDKTFMGPLKAYYSEEVRLCLRQQQRALSPFDIADLFGKAYLKVQTAEIAVKGFLVTGIYPLNKNIFSDADYIAAAQKVGPLSLTTSPQIAQTLPATDVSPQTPTSSCLSTSATHVSPPSPTSAGTSKSAMIAPHTPSSSGPSTSGLGKTVKPHDISPVPTVKAKVTNRGRKSCGSAVITSSPYKNDLLRTTPKRAVTLSSKRRNSKNQKKRQVRPIESETEESSSDDSASLIDSDDSDIDEPGQLHPDSQDASCLFCDGKFSNDSRGELWVECLLCKMWAHSDCAGAEKDTYVCDYCK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01448423;
90% Identity: iTF_01448423;
80% Identity: iTF_01448426;