Tmon044293.1
Basic Information
- Insect
- Timema monikensis
- Gene Symbol
- -
- Assembly
- GCA_902151445.1
- Location
- CABFVZ010003114.1:24080-26191[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 6.7e-06 27.8 0.0 3 35 20 52 18 61 0.91
Sequence Information
- Coding Sequence
- ATGCCAAGAACTAAATTACAAAAAGAAAGCGAAGgcttaagaaaaaattataataaggaAGACATGATAAGAGCTATTGAAGCTGTTAAAGCCAAAGAATGTGGATATTTGAAGGCAGCAAAGAAATATAATGTGCCACGATCTACCCTTGCACGTCTATGTTCAAAGGTGAATGAAGGTGTTACTGTTGAGAGTGTAGCTGCTACGAAATTAGGGAGAAATACAATTTTGGGTGATGAAATTGAAAAACAACTAGTTGAATATATTCTAACAATGGAATCCAAGTTCTACGGTTTGACCACGAATGACATAAAGAAGATGGCATACCAATTAGCTGTTAGAAATGGCATCAAGCATCCTTTTGGAGAGGAAAAAGCAGGAAGAGGCTGGATAGACCATTTTTTGTCACGCCATAAGGACACGATTTCACTGCGTAAGCCTACAGGTACGTCTGCTGCCAGAGCACTAGGTTTCACTAAAGAAAGAGTGGATGCTTTTTTTGACAATCTTGATGAACAATATGAGAAATTTTCATTTACTCCCGATCGAATTTACAACGTCAACGAAACAGGGTTGTCTGTTGTGCAGTCAAAAATACCCAAAGTTGTGGGGTTAAAAGGCAAAAGACAAGTTGCTAGCCTAACTTCAGCCGAACGAGGTGGGCTGATTACTATAGTGTGTTGCATGAATGCAGCAGGGAGTTTTGTGCCTCCGATGATAATTTTTCCaaggaaaaatgaaaacaagCAGTTGATGAAAGGAGCCCCACATGGATCTATTGCTACATACCACCCGTCTGGCTGGATTCAAGCACACCTTTTCACAAAATGGTTCCAGCATTTCTTAAATGTTGCCAAACCGACAAAAGATTCTCCAGTATTGCTGATTCTGGATGGCCATTATAGCCACACCAGAAATATAGAGGTCATCGATTTGGCCAGAAATAATTTTGTGTCAATTGTGTCGCTTCCCCCGCACTCGACACACAAATTACAGCCTCTAGATAAAACCTTCATGGGTCCACTGAAGGCGTACTACAGCGAGGAAGTGCGGCTATGTTTGCGGCAACAACAAAGAGCACTGAGTCCATTCGACATTGCAGACTTATTCGGGAAGGCATATTTGAAAGTGCAAACAGCTGAAATAGCTGTTAAGGGATTTCTTGTAACCGGAATCTACCCgctaaataagaatattttctcCGACGCGGATTATATAGCAGCCGCCCAAAAAGTAGGGCCCCTATCTTTGACCACATCACCACAAATAGCACAAACTTTGCCTGCAACTTATGTTTCCCCGCAGACTCCGACTAGCTCCTGTCTATCCACATCTGCAACTCACGTCTCTCCACCGAGTCCAACTAGCGCCGGTACATCCAAGTCTGCAATGATTGCACCGCATACTCCATCTAGCTCTGGTCCATCTACAAGTGGCTTAGGGAAAACAGTCAAACCTCACGACATCTCACCTGTTCCAACAGTTAAAGCTAAAGTTACAAATCGTGGACGTAAATCATGTGGTTCCGCAGTTATTACCTCATCACCATATAAGAATGACTTACTTCGCACTACACCAAAGCGAGCTGTCACCTTATCCTCTAAAAGAAGAAAttcaaaaaatcaaaagaaGAGGCAAGTTAGGCCTATTGAATCCGAAACAGAAGAATCTTCAAGTGATGATAGTGCTTCATTAATTGATTCAGATGATTCTGATATAGATGAACCTGGCCAGCTTCATCCAGATTCACAGGATGCCAGTTGCCTATTTTGTGATGGCAAATTTTCTAACGACTCTAGGGGAGAATTGTGGGTAGAGTGTCTCCTATGCAAGATGTGGGCCCATAGTGATTGTGCTGGTGCAGAAAAAGACACCTATGTATGTGATTATTGTAAATAG
- Protein Sequence
- MPRTKLQKESEGLRKNYNKEDMIRAIEAVKAKECGYLKAAKKYNVPRSTLARLCSKVNEGVTVESVAATKLGRNTILGDEIEKQLVEYILTMESKFYGLTTNDIKKMAYQLAVRNGIKHPFGEEKAGRGWIDHFLSRHKDTISLRKPTGTSAARALGFTKERVDAFFDNLDEQYEKFSFTPDRIYNVNETGLSVVQSKIPKVVGLKGKRQVASLTSAERGGLITIVCCMNAAGSFVPPMIIFPRKNENKQLMKGAPHGSIATYHPSGWIQAHLFTKWFQHFLNVAKPTKDSPVLLILDGHYSHTRNIEVIDLARNNFVSIVSLPPHSTHKLQPLDKTFMGPLKAYYSEEVRLCLRQQQRALSPFDIADLFGKAYLKVQTAEIAVKGFLVTGIYPLNKNIFSDADYIAAAQKVGPLSLTTSPQIAQTLPATYVSPQTPTSSCLSTSATHVSPPSPTSAGTSKSAMIAPHTPSSSGPSTSGLGKTVKPHDISPVPTVKAKVTNRGRKSCGSAVITSSPYKNDLLRTTPKRAVTLSSKRRNSKNQKKRQVRPIESETEESSSDDSASLIDSDDSDIDEPGQLHPDSQDASCLFCDGKFSNDSRGELWVECLLCKMWAHSDCAGAEKDTYVCDYCK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01448483; iTF_01448484; iTF_01448485; iTF_01448486; iTF_01448487; iTF_01448424; iTF_01448425; iTF_01448489; iTF_01448426; iTF_01448427; iTF_01448491; iTF_01448492; iTF_01448493; iTF_01450465;
- 90% Identity
- iTF_01448483; iTF_01448484; iTF_01448485; iTF_01448486; iTF_01448487; iTF_01448424; iTF_01448425; iTF_01448489; iTF_01448426; iTF_01448427; iTF_01448491; iTF_01448492; iTF_01448493; iTF_01450465;
- 80% Identity
- -