Tgen007506.1
Basic Information
- Insect
- Timema genevievae
- Gene Symbol
- tfip11
- Assembly
- GCA_902155825.1
- Location
- CABFWO010000345.1:273749-278386[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-67 8.3e-63 214.6 16.0 99 275 12 185 6 185 0.98 2 2 0.057 1.4e+03 0.6 0.0 157 189 197 228 190 236 0.73
Sequence Information
- Coding Sequence
- ATGGCTTTTGGTGGGTTTTGTATCTTGATAGTATGcaCTTGGAATTGCCGCGTGTGCGAGCCTCTGGTGGACTTGATCCAAGTATGGATCCCTCTGCTGCCAGGATGGATACTAGACAACATCCGGGAACAGCTTATACTTCCCCGGATAACACAAGAGGTGGAATATTGGAACCCCATGACTGATACAGTCCCTATCCATGCCTGGATACACCCTTGGCTGCCGCTTTTGGGTGTGCGGCTCGAAACAAGTGTGTTCCCAATGATCAGACATAAGCTGAGCAAGGCGCTGGTTAGCTGGCATCCATCTGACCGCTCGGCCCGCCTTATGCTTCTTCCGTGGCACAGGGTGTTCTCCCGAGGCGAGATGGAGGCTTTCCTAGTGAAGAACATTCTCCCCAAACTACAGCTGGCCCTACAGGAGCTGGTCATAAACCCTCACGAGCAACATCTAGAACAGTGGAATTGGGTCATGGAATGGAAAGACCTCCTACCTCTACACTCCCTTTCTGGGGTGCTTGAAAAACACTTCTTCCCTAAGTGGCTTCAGGTGCTTACTTTGTGGCTCAACCACTCCCCCAACTACGACGAGATCACCCACTGGTACATGGGCTGGAAGAATATGGTCTCCGAGAGCCTTCGCGCCCAGCCTGGTATCAAAGAACAGTTCAACAAGGCGCTAGAGCTGATGAACCGGGCAGTGAGCTCTGGTGGACAGTCAGGAAACCAGCAGCCAGGAGCGGTTGAGTCTGTTTCTTACCTGACCAACATCGAACAGAGCCAGCTCCCAGGCCAGAGGGTTCGGGACAGAGAGTCTCGATATGAGCTCTTGGCGGAGGCGGTGAGGACAGCAAGTCAGGTGCCTCAGGGGTTCAAGGAGCTAATACAGAAACGCTGCGAGGAGCAAGGACTTCTCTTCGTCCCTCTTACCAACAGGTATCGCGAGGGCAAACAGATCTACCGTTGCGGTAATATACAGCTCTATGTTGACCGTAACGTAGCATTTGTCAGCGACAACAGCGGGGCGAGTTGGAACCCCAAGTCACTCAAAGCAGTCCTGGACATGGCTTCGTAA
- Protein Sequence
- MAFGGFCILIVCTWNCRVCEPLVDLIQVWIPLLPGWILDNIREQLILPRITQEVEYWNPMTDTVPIHAWIHPWLPLLGVRLETSVFPMIRHKLSKALVSWHPSDRSARLMLLPWHRVFSRGEMEAFLVKNILPKLQLALQELVINPHEQHLEQWNWVMEWKDLLPLHSLSGVLEKHFFPKWLQVLTLWLNHSPNYDEITHWYMGWKNMVSESLRAQPGIKEQFNKALELMNRAVSSGGQSGNQQPGAVESVSYLTNIEQSQLPGQRVRDRESRYELLAEAVRTASQVPQGFKELIQKRCEEQGLLFVPLTNRYREGKQIYRCGNIQLYVDRNVAFVSDNSGASWNPKSLKAVLDMAS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -