Tdou028972.1
Basic Information
- Insect
- Timema douglasi
- Gene Symbol
- -
- Assembly
- GCA_901482245.1
- Location
- CABEEJ010003185.1:13439-27810[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 7.4e-05 2.3 10.1 0.0 17 33 168 185 162 187 0.88 2 6 7.5e-05 2.3 10.1 0.1 17 33 217 234 212 236 0.87 3 6 7.5e-05 2.3 10.1 0.1 17 33 266 283 261 285 0.87 4 6 7.5e-05 2.3 10.1 0.1 17 33 315 332 310 334 0.87 5 6 7.5e-05 2.3 10.1 0.1 17 33 364 381 359 383 0.87 6 6 0.0032 1e+02 4.8 0.0 17 32 400 416 393 418 0.85
Sequence Information
- Coding Sequence
- ATGGACGAGGGAAGAACCTCTAATCCTCGTGGAATGGACGAGGGAAGAACCAGTTTGGTCCAAACCTCTGATCCTCGTGGAATGGACGAGGGAAGAACCAGTTTGGTCCAAACCTCTGATCCTCGTGGAATGGAAGGTAGTCATTCTCCTGCTCAAGCTAGTCATTCTCCTGCTCAAGGTAGTCATTCTCCTGCTCAAGGTAGTCTATTCTCCTGCTCAAGCTGGTCTATTCTCCTGCTCAAGCTAGTCATTCTCCTGCTCAAGTCGTTCGCGAACGAATACTTGTTTTGCAGCTCATCGTTCGCGACCGACCAAACTTCAGCTAGTGGATCTTCGTTCGCGACCGACCTGATACAGACTGGTGGCCCATCGTTCGCGACCGACCTACGGCTTTCAATCAGTGTGGACAGGTGTGACGTCAAACCTGGCAACCAAGTCATGGGGGAGAGACTGGAGAGCCCAAAGGACTTCAAGGATATCTCGCAGAGCTCAGGCTATAACGTGACATATATAGATATACGGCATCATTACGAATGGAACGATGGCGAGTTACGGTCTCACCTCCTGAAGAAGGACTTCAGGGAGATCTCACAGAGTGCAGGTTATAACAAGGACTTCAAGGATATCTCGCAGAGCTCAGGCTATAACGTGACATATATAGATATACGGCATCATTACGAATGGAACGATGGCGAGTTACGGTCTCACCTCCTGAAGAAGGACTTCAGGGAGATCTCACAGAGTGCAGGTTATAACAAGGACTTCAAGGATATCTCGCAGAGCTCAGGCTATAACGTGACATATATAGATATACGGCATCATTACGAATGGAACGATGGCGAGTTACGGTCTCACCTCCTGAAGAAGGACTTCAGGGAGATCTCACAGAGTGCAGGTTATAACAAGGACTTCAAGGATATCTCGCAGAGCTCAGGCTATAACGTGACATATATAGATATACGGCATCATTACGAATGGAACGATGGCGAGTTACGGTCTCACCTCCTGAAGAAGGACTTCAGGGAGATCTCACAGAGTGCAGGTTATAACAAGGACTTCAAGGATATCTCGCAGAGCTCAGGCTATAACGTGACATATATAGATATACGGCATCATTACGAATGGAACGATGGCGAGTTACGGTCTCACCTCCTGAAGAAGGACTTCAGGGAGATCTCACAGAGTGCAGGTTATAACGTGACATATCTAGATATACGGCATCATTACGGCCCAGATAATGGGACGATGGCAAGTTACGGTCTCACCTCCTGA
- Protein Sequence
- MDEGRTSNPRGMDEGRTSLVQTSDPRGMDEGRTSLVQTSDPRGMEGSHSPAQASHSPAQGSHSPAQGSLFSCSSWSILLLKLVILLLKSFANEYLFCSSSFATDQTSASGSSFATDLIQTGGPSFATDLRLSISVDRCDVKPGNQVMGERLESPKDFKDISQSSGYNVTYIDIRHHYEWNDGELRSHLLKKDFREISQSAGYNKDFKDISQSSGYNVTYIDIRHHYEWNDGELRSHLLKKDFREISQSAGYNKDFKDISQSSGYNVTYIDIRHHYEWNDGELRSHLLKKDFREISQSAGYNKDFKDISQSSGYNVTYIDIRHHYEWNDGELRSHLLKKDFREISQSAGYNKDFKDISQSSGYNVTYIDIRHHYEWNDGELRSHLLKKDFREISQSAGYNVTYLDIRHHYGPDNGTMASYGLTS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -