Tdou015818.1
Basic Information
- Insect
- Timema douglasi
- Gene Symbol
- -
- Assembly
- GCA_901482245.1
- Location
- CABEEJ010001212.1:22581-23789[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.0038 1.2e+02 4.2 0.0 127 167 79 119 52 142 0.47 2 5 0.0058 1.8e+02 3.6 0.0 118 163 119 164 103 179 0.43 3 5 0.0023 72 4.9 0.0 140 161 183 204 142 245 0.47 4 5 0.004 1.2e+02 4.1 0.0 123 163 236 276 214 298 0.42 5 5 0.0022 67 5.0 0.0 115 177 298 360 288 368 0.72
Sequence Information
- Coding Sequence
- ATGTTACACAAACATTGGTTCACTGATGCTCTCCCAGGCACGCCCACTCACTCGctggacacgctggcccactCGATGGACATGCGGGACCACTCGctggacacgctggcccactCGCTAGCCCACTCGATGGACATGCGGGACCACTCGctggacacgctggcccactCGCTGGATACGCTGGTCCACTCGCTGGATACGCTGGTCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGCTGGATACGCTAGCCCACTCGctggacacgctggcccactCATTGGACACGCTGGGTCAATTACTGGAGACGCTGGCCTACTCATTGGACATGCTAGGTCAATTACTGGAGACGCTGGCTCACTCACTGGGCAAGCTCACAAACTGGACACGCTGCCCCATTCTCTGGGCATGCTATCTTACACACTGGACACGTTAG
- Protein Sequence
- MLHKHWFTDALPGTPTHSLDTLAHSMDMRDHSLDTLAHSLAHSMDMRDHSLDTLAHSLDTLVHSLDTLVHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLAHSLDTLGQLLETLAYSLDMLGQLLETLAHSLGKLTNWTRCPILWACYLTHWTR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -