Tcri034969.1
Basic Information
- Insect
- Timema cristinae
- Gene Symbol
- Mblk-1
- Assembly
- GCA_002928295.1
- Location
- CM009483.1:11138503-11141082[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-18 1e-14 55.3 0.1 1 45 11 56 11 56 0.96 2 2 2.9e-18 3.8e-15 56.8 0.0 1 43 454 497 454 499 0.95
Sequence Information
- Coding Sequence
- ATGAGCGCTATCTCAGGACGGCGGACATACACGGAAGATGAACTTCAGGCAGCTTTACGAGACATCCAAAGTGGTAAGTTAGGCACAAGGCGCGCTGCTGTAATTTATGGCATCCCACGCTCTACTCTGCGCAACAAAGTATACAAACTAGCAATGGAACGAGAGCGTGACTCTCATTTGGTTGCTGCAGAGGCTCTCAAAGTCGAAGAAGATGAGAAGGAGCTATCAGCTGCAGAAGAAGAACAGGAGGTAGAAAAAGTTCTGAGGAAACCTTTACTGTCCATGGAAGACTTGATTCGTTTTTCTGTACTTGATAGCAGTGGGAGTACTTCTGATTCTTTGCGAGCACTGCTGCGCCTTCATGAAGAGAGGTCTGGTAGTACTTCACCATCCGAGTGTTTACCGTTCCCTCTTGACATGTGGGGTGGCCTTGAGCATAGTACACTTGCTCCATACATTTCTAACCTCCTTGCAGCCGCTGGTTTGTCCAACAGGGTTTCACACAGGGAAAGTATTGCTGCAAACTTTGCAAAGTTCCCAAATCACCTGCCGGAAATTATGCGAAGGATGGTGACTGAAGAGAAGATTTTATTTGAcgaacatttaagaaaaaacataagTATTGGGCCAAGCATTCACTTGAATGGCAGCCACTCAGAAGACgaggaaaatagaaaaaataggcCAGAGGTTATCGTACATCCCAAGGCAACCTCAAGAGAAGATGATGAGTCTATGGATGTTGACACAGCAGGTACTGCAGCTTCCGGAACGGCCACCCCACCCAATGTGATACTGAGAATTCCGTCCTTCAAACCGACTTCAAAGAATGGAGTGGTATCCGGCAGCAGTGGTGGTATAGAGCCTTTGCTCCTGaatcaaaatatacataaaagtgATGTTGCCAGCCCTGGGCTTGTTCAAGTGTCTAGTCAGccaatttgttttgaaacacaTAGTAACAGTGATTCGTGTTCTCCCCCAGTTAACAGCTCAGTCGGGAAAGGTGTTGGAGTGAGTTTAAGGGATGTCATTGCAAAAAGCATCAGTCAAAAGTTTCAGCAACACAGTGTTGAAACCATGTTGCCTCTTTCTCATCCCCAACATAAAATACTTTACTCTTCTAATGAAATAGATAACCCAACAAACACTCATAGACAATTCACTCCTCCACTTAGTAACACTCCATCATCTATAGCCGCGtctgttattaaaaacaacaataacaacatccATGAAGACCATAATGTGCAAAAGTTGTCTCCTATAAATAAATCACCCTCAAGCAGTAGTTCTACTGGCTGCACAAGCACTGGGGGGAAAGGTACAAGGCCAAAACGAGGCAAGTATCGTAACTATGACAGAGACAGCCTTGTCGAGGCTGTGCGAGCTGTCCAAAGGGGAGAAATGAGTGTCCATAGGGCCGGCTCATATTATGGTGTTCCTCATTCAACTCTGGAGTACAAAGTGAAAGAGCGACATTTAATGAGGCCACGCAAACGAGAACCGAAGACACATATTGATGATACTAAGCGAAAGGATGAGTGCTTGAGGATGTCTTCCCCAGACAAACCCAAGTTGTCCCAGAAGCCTTTTAAACCTCTCTATGGACCATCCTCTCCCCTTTCAAACCCACCAAATGGATTAAAAATGCCACCCCTTTTTGATCCAAATATGCCTCTACCATATCCACCTGCACCACCCTTTCCATTCTGGCCAACAAACCCGTTTCATTCCCTCCCTCTTTCGGATTTCCCTCGTGGAACAGGGGGTCCTCCTGGGTTTAGTTCTACACATGAACAATTTTATGCCTCTCAAATGATGCAAAGATTACAAGAAGACTCATCTCGTTCACATCCAAGCATTAGTCCTGGTGTTTCTTGTAGTCCACCTATCATTGGGCCTGGCAGCACACTAGGTAAGAGTGCCCGTGAAATGGCAGAAAGCTTGTATGACGGAACAGGAGCTAATGGAAGCTTTCTGGATGGCATAATACGTTCAAGTCTTGAAATGGGACTTCATGCAGGCCACCCTAAAAGCTGTGGGGATAAAAATGAAGTAGCAGAGAAAATGTCAAACAAGACTCTACTGGATCAACTATGTAAAAACAGTCGCTTTCCTCCCCTTTCCCATCCTTCACGTGATGGAAGCAGCTCTGATGAAGATTCATCTGTCAAGAGGCTTTCAGAAAGTACCTTCAGGAAGACTGATTCTGAAGCAAGCATGTCTGCTAATCTTGATTTTTCTCCTTCATCAAACGGCTCTGTGACTCGTGATGAAAAACATCCAGACGACATGGTGGAAGATGATGACTCCAAACCCATCAAGCCGCTTTCGCCAGTAGATAACACCAATAAGTCATTTATTAGCGATGATCATGACTTAAAACTGTCACCCAAAGAAAGAATTAGTGTTGGTAGCGATGAATTATGTGATCCAACAGACGAAGAAAGTGCCTGTGATAGTAAACAAAGTCTACTGAAAGTTGATGCTAACAATGCTGCCAAAGATGGAGTTGTGCAAGAAAGAACGGAAGAAGAGGAAACCGAATCAAAGATGATTAACTCGCCTAGAGACTGA
- Protein Sequence
- MSAISGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDSHLVAAEALKVEEDEKELSAAEEEQEVEKVLRKPLLSMEDLIRFSVLDSSGSTSDSLRALLRLHEERSGSTSPSECLPFPLDMWGGLEHSTLAPYISNLLAAAGLSNRVSHRESIAANFAKFPNHLPEIMRRMVTEEKILFDEHLRKNISIGPSIHLNGSHSEDEENRKNRPEVIVHPKATSREDDESMDVDTAGTAASGTATPPNVILRIPSFKPTSKNGVVSGSSGGIEPLLLNQNIHKSDVASPGLVQVSSQPICFETHSNSDSCSPPVNSSVGKGVGVSLRDVIAKSISQKFQQHSVETMLPLSHPQHKILYSSNEIDNPTNTHRQFTPPLSNTPSSIAASVIKNNNNNIHEDHNVQKLSPINKSPSSSSSTGCTSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKTHIDDTKRKDECLRMSSPDKPKLSQKPFKPLYGPSSPLSNPPNGLKMPPLFDPNMPLPYPPAPPFPFWPTNPFHSLPLSDFPRGTGGPPGFSSTHEQFYASQMMQRLQEDSSRSHPSISPGVSCSPPIIGPGSTLGKSAREMAESLYDGTGANGSFLDGIIRSSLEMGLHAGHPKSCGDKNEVAEKMSNKTLLDQLCKNSRFPPLSHPSRDGSSSDEDSSVKRLSESTFRKTDSEASMSANLDFSPSSNGSVTRDEKHPDDMVEDDDSKPIKPLSPVDNTNKSFISDDHDLKLSPKERISVGSDELCDPTDEESACDSKQSLLKVDANNAAKDGVVQERTEEEETESKMINSPRD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01448370; iTF_01444623; iTF_01446403; iTF_01447412; iTF_01450388;
- 90% Identity
- iTF_01448370; iTF_01446403; iTF_01444623; iTF_01447412; iTF_01450388;
- 80% Identity
- -