Basic Information

Insect: Timema bartmani
Gene Symbol: Mblk-1
Assembly: GCA_902151455.1
Location: CABFWB010001809.1:71466-74033[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.3e-17 1.8e-14 55.4 0.1 1 45 11 56 11 56 0.96

2 2 8.4e-18 6.5e-15 56.8 0.0 1 43 455 498 455 500 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.3e-17	1.8e-14	55.4	0.1	1	45	11	56	11	56	0.96
2	2	8.4e-18	6.5e-15	56.8	0.0	1	43	455	498	455	500	0.95

Sequence Information

Coding Sequence: ATGAGCGCTATCTCAGGACGGCGAACATACACGGAAGATGAACTTCAGGCAGCTTTACGAGACATCCAAAGTGGTAAGTTGGGCACAAGGCGCGCTGCTGTAATTTATGGCATCCCACGCTCTACTCTGCGCAACAAAGTATACAAACTAGCAATGGAACGAGAGCGTGACTCTCATTTGGTTGCTGCAGAGGCTCTCAAGGTCGAAGAAGATGAGAAGGAGCTATCAGCTGCAGAAGAAGAACAGGAGGTAGAAAAAGTTCTGAGGAAACCTTTACTGTCCATGGAAGACTTGATTCGTTTTTCTGTACTTGATGGCAGTGGGAGCACTTCTGATTCATTGCGAGCACTCCTGCGCCTTCATGAAGAGAGGTCTGGTAGTACTTCTCCATCCGAGTGTTTACCGTTTCCTCTTGACATGTGGGGTGGCCTTGAGCATAGTACACTTGCTCCATACATTTCTAACCTCCTTGCAGCCGCTGGTATGTCCAACAGGGTTTCACACAGGGAAAGTATCCCAGGAAACTTTGCAAAGTTCCCAAATCACCTTCTGCCGGAAATCATGCGAAGGATGGTGACTGAAGAGAAGATTTTATTTGAcgaacatttaagaaaaaacataagTATTGGGCCAAGCATTCACTTGAATGGCAGCCACTCAGAAGaggaagaaaatagaaaaaataggCGCGAGGTTATCGTACATCCCAAGGCAACATCAAGGGAAGATGACGAGTTTATGGATGTTGACACAGCAGGTACTGCAGCTTCCGGAACGGCCACCCCACCCAATGTGATACTGAGAATTCCGTCCTTCAAACCGACTTCAAAGAATGGAGTGGCATCCGGCAGCAGTGGTGGTGTAGAGCCTTTGCTCCTGaatcaaaatatacataaaagtgATGTTGCCAGCCCCGGGCTTGTTCAAGTGTCTAgtcagccattttgttttgaaacgCATAGTAACAGTGACTCGTGCTCTCCCCCAGTTAACAGCTTAGTCGGGAAAGGCGTTGGGGTGAGTTTAAGGGATGTTATTGCAAAAAGCATCAGTCAAAAGTTTCAGCAACACAGTGTTGAAACCATGCCGCCTCTGTCTCATCCCCAACATAAAATACTTTCCTCCTCTAATGAAATAGATGACCCAACATATTCTCATAGACAATTCACTCCTCCGCTTAGTAACACTCCATCATCTATTGCCGCTTCtgttattaaaaacaacaataacaacatcCACGAAGACCGGAATGTGCAAAAGTTGTCTCCTATAAATAAATCACCCTCAAGCAGTAGCTCTACTGGCTGCACAAGCACTGGGGGGAAAGGTACGAGGCCAAAACGGGGCAAGTATCGGAACTATGACAGAGACAGCCTTGTCGAGGCTGTGCGAGCTGTCCAAAGGGGAGAAATGAGTGTCCACAGGGCCGGCTCGTATTATGGTGTTCCTCACTCAACTCTGGAGTACAAAGTGAAAGAGCGACATTTAATGAGGCCACGCAAACGAGAACCGAAGACGCATATTGATGACACTAAGCGAAAGGATGAGTTCTTGAGGATGTCTTCCCCAGACAAACCCAAGTTGTCCCAGAAGCCTTTTAAACCTCTCTATAGACCATCCTCTCCCCTTTCAAACCCACCAAATGGATTAAAAATGCCACCCCTTTTTGATCCAAATATGCCTCTACCATATCCACCTGCACCACCCTTTCCATTCTGGCCAACAAACCCATTTCATTCCCTCCCTCTTTCGGATTTCCCTCGTGGAACAGGGGGTCCTCCTGGTTTTAGTTCTACACATGAACAGTTCTATGCCTCTCAAATGATGCAAAGATTACAAGAAGACTCATCCCGTTCACATCCAAGCGTTAGTCCTGGTGTTTCTTGTAGTCCGCCTATCGTTGGGCCTGGCAGCACACTAGGCAAGAGTGCCCGTGAAATGGCAGAAAGCTTGTATGACGGAACAGGAGCTAATGGAAGCTTTCTGGATGGCATAATACGTTCAAGTCTTGAAATGGGACTTCATGCTGGCCACCCTAAAAGCTGTGGGGATAAAAATGAAGTAGCAGAGAAAATGTCAAACAAGGCTCTACTGGATCAACTATGTAAAAACAGTCTGTTTCCTCCCCTTTCCCATCCTTCACGCGACGGAAGCAGCTCTGATGAAGATTCATCTGTCAAGAGGCTTTCAGAGAGTACCTTCAGGAAGACTGACTCTGAAGCAAGCATGTCTGCCAATCTTGACTTTTCTCCCTCATCAAATGGCTCTGTGACTCGTGATGATAAACATCCAGACGACACGGTGGAAGCCGATGACTCTAAACCCGTAAAGCCGCCTTCGCCAGTAGATAACACCAATAAGTCATTTATTAGCGATGATCATGACTTAAAACTGTCATCCAAAGAAAGAATTAGCGTTGGTAGCGCTGAATTCTGTGATCCAACAGACGAAGAAAGTGCCTGTGATAGTAAACAAAGTCTACTGAAAGTTGATGCTAACAATGCTGCCAAAGATGGAGTTGCGCAAGAAAGAAGGGAAGAGGAGGAAACCAAAATCAAAGATGATTAA
Protein Sequence: MSAISGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDSHLVAAEALKVEEDEKELSAAEEEQEVEKVLRKPLLSMEDLIRFSVLDGSGSTSDSLRALLRLHEERSGSTSPSECLPFPLDMWGGLEHSTLAPYISNLLAAAGMSNRVSHRESIPGNFAKFPNHLLPEIMRRMVTEEKILFDEHLRKNISIGPSIHLNGSHSEEEENRKNRREVIVHPKATSREDDEFMDVDTAGTAASGTATPPNVILRIPSFKPTSKNGVASGSSGGVEPLLLNQNIHKSDVASPGLVQVSSQPFCFETHSNSDSCSPPVNSLVGKGVGVSLRDVIAKSISQKFQQHSVETMPPLSHPQHKILSSSNEIDDPTYSHRQFTPPLSNTPSSIAASVIKNNNNNIHEDRNVQKLSPINKSPSSSSSTGCTSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKTHIDDTKRKDEFLRMSSPDKPKLSQKPFKPLYRPSSPLSNPPNGLKMPPLFDPNMPLPYPPAPPFPFWPTNPFHSLPLSDFPRGTGGPPGFSSTHEQFYASQMMQRLQEDSSRSHPSVSPGVSCSPPIVGPGSTLGKSAREMAESLYDGTGANGSFLDGIIRSSLEMGLHAGHPKSCGDKNEVAEKMSNKALLDQLCKNSLFPPLSHPSRDGSSSDEDSSVKRLSESTFRKTDSEASMSANLDFSPSSNGSVTRDDKHPDDTVEADDSKPVKPPSPVDNTNKSFISDDHDLKLSSKERISVGSAEFCDPTDEESACDSKQSLLKVDANNAAKDGVAQERREEEETKIKDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01445567;
90% Identity: iTF_01445567;
80% Identity: -