Tcom005158.1
Basic Information
- Insect
- Timandra comae
- Gene Symbol
- dmd-4
- Assembly
- GCA_958496195.1
- Location
- OY292357.1:5888215-5891881[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-24 7.1e-21 74.4 11.2 1 47 7 53 7 53 0.98 2 2 3.8 2.7e+04 -4.2 5.5 2 10 284 292 278 294 0.85
Sequence Information
- Coding Sequence
- atgaatagtgGAAGAGCACGGGTACCTAAATGTGCCAGATGTCGTAACCACGGCTTGATATCCAGTCTTCGCGGACATAAGAAAGCTTGCGCGTACAGGCACTGCCAATGTCCGAAATGTGGACTCATCAAAGAAAGACAAAGAATTATGGCCGCTCAGGTGGCATTAAAAAGGCAACAAGCAGCTGAAGACAAAATAGCGCTACACCTAGCGTCTGTGGAAAGTGGGACGGCTCTTGATGCATTACCACCGGGACGCATATACGGAATGAGAGTCACGGAACCATGCCCCAGTCCAGGGCCTGAGCCAGATTCCGCTGCGGATGATCATACGCCGATTCATATTGACAGTGAGACCAGTGACTCTTTACCAGATTGTTGCAATGTATCTCCTGATTCTGCGGGAACTTCCTCATCTTCGATACGTGTTGGGTCTGAAATGGGAATGGACGGAGAAGGGTCTGTGAGTAGCGCGGGTTTGGATATGCTGAGAAAATTGTTTCCCGGCAAAAAGCGGTCAGTCCTCGAGCTGGTTCTTCGACGCTGCAACCACGATCTGCTTCGAGCCGTCGAACATTTTAATGCTACTCGgGATCAACGAGACAAGTTCCCGGGTAGCAGTTCAAGTGGATCAGCCTTTGATACTTCGATATCCAGTTCCGAAGAAGCCGAGACCAGGTGGTCTGCGTTCAGGCCAGTCGGGCCTCGGGCGCCATTGCTGCCCGCTTTAGTTATGGGCAGAGTTTGTGGATCAGATTGGCTGGTACCATTACCAGCTTTACCAACGTTATCCACTCCTCTATTACTACCTCTTCAGCACCCCCATGCTCCCCCTTCTTGTAATCCATGCACTCCGGACTGTAGACAGTGCAATAATCGCCATTAA
- Protein Sequence
- MNSGRARVPKCARCRNHGLISSLRGHKKACAYRHCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTALDALPPGRIYGMRVTEPCPSPGPEPDSAADDHTPIHIDSETSDSLPDCCNVSPDSAGTSSSSIRVGSEMGMDGEGSVSSAGLDMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHFNATRDQRDKFPGSSSSGSAFDTSISSSEEAETRWSAFRPVGPRAPLLPALVMGRVCGSDWLVPLPALPTLSTPLLLPLQHPHAPPSCNPCTPDCRQCNNRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00662271;
- 90% Identity
- iTF_00406799;
- 80% Identity
- -