Basic Information

Insect: Timandra comae
Gene Symbol: -
Assembly: GCA_958496195.1
Location: OY292371.1:3970366-3972122[+]

Transcription Factor Domain

TF Family: RHD
Domain: RHD domain
PFAM: PF00554
TF Group: Beta-Scaffold Factors
Description: Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0015 8.3 7.0 0.1 16 59 8 52 6 62 0.86

2 8 0.0016 8.6 6.9 0.2 16 59 74 118 72 131 0.86

3 8 0.0012 6.5 7.3 0.2 15 59 104 149 92 169 0.87

4 8 0.05 2.8e+02 2.0 0.5 16 55 136 180 123 191 0.66

5 8 0.0017 9.3 6.8 0.2 16 59 171 215 168 223 0.86

6 8 0.0013 7.1 7.2 0.2 15 59 201 246 189 257 0.86

7 8 0.0011 6.4 7.3 0.1 15 59 283 328 271 338 0.86

8 8 0.0014 7.6 7.1 0.1 16 59 350 394 347 407 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0015	8.3	7.0	0.1	16	59	8	52	6	62	0.86
2	8	0.0016	8.6	6.9	0.2	16	59	74	118	72	131	0.86
3	8	0.0012	6.5	7.3	0.2	15	59	104	149	92	169	0.87
4	8	0.05	2.8e+02	2.0	0.5	16	55	136	180	123	191	0.66
5	8	0.0017	9.3	6.8	0.2	16	59	171	215	168	223	0.86
6	8	0.0013	7.1	7.2	0.2	15	59	201	246	189	257	0.86
7	8	0.0011	6.4	7.3	0.1	15	59	283	328	271	338	0.86
8	8	0.0014	7.6	7.1	0.1	16	59	350	394	347	407	0.86

Sequence Information

Coding Sequence: ATGTGTGTATGCGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATATGTGTGTATGCGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATATGTGTGTATGCGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTATGCGTGTCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATAtagatATGTGTGTATGCGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGATATAGATGTGTGTATGCGTGTGTACGTACGCGTGCGAGGTGCGGTCGGAGTGCTCGTTGAGCAGCAGCGCCTGCACGGCCCGCGAGCGCGCGTGGCGCTATGA
Protein Sequence: MCVCVCTYACEVRSECSLSSSACTARERAWRYDIDVCTYACEVRSECSLSSSACTARERAWRYDIDMCVCVCTYACEVRSECSLSSSACTARERAWRYDIDVCTYACEVRSECSLSSSACTARERAWRYDIDVCTYACEVRSECSLSSSACTARERAWRYDIDMCVCVCTYACEVRSECSLSSSACTARERAWRYDIDVCTYACEVRSECSLSSSACTARERAWRYDIDVCTYACEVRSECSLSSSACTARERAWRYDIDVCMRVSACTARERAWRYDIDVCTYACEVRSECSLSSSACTARERAWRYDIDVCTYACEVRSECSLSSSACTARERAWRYDIDMCVCVCTYACEVRSECSLSSSACTARERAWRYDIDVCTYACEVRSECSLSSSACTARERAWRYDIDVCMRVYVRVRGAVGVLVEQQRLHGPRARVAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -