Basic Information

Insect: Tillus elongatus
Gene Symbol: -
Assembly: GCA_964006375.1
Location: OZ023268.1:129799142-129833621[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00028 0.052 16.3 2.4 1 23 440 462 440 462 0.96

2 17 0.00014 0.026 17.3 1.8 1 20 468 487 468 490 0.94

3 17 6.1e-05 0.011 18.4 1.4 1 23 496 518 496 518 0.98

4 17 9.3e-05 0.017 17.9 4.4 1 21 524 544 524 546 0.95

5 17 0.00026 0.048 16.4 4.7 1 23 552 574 552 574 0.99

6 17 5e-05 0.0091 18.7 5.3 1 23 580 602 580 602 0.97

7 17 5.2e-07 9.6e-05 24.9 5.0 1 23 608 630 608 630 0.98

8 17 1.9e-07 3.5e-05 26.3 2.7 1 23 636 658 636 658 0.98

9 17 0.00014 0.026 17.3 6.7 1 23 664 686 664 686 0.97

10 17 8.3e-05 0.015 18.0 5.8 1 23 692 714 692 714 0.97

11 17 1.3e-05 0.0024 20.6 7.8 1 23 720 742 720 742 0.98

12 17 0.00013 0.023 17.5 8.1 1 23 748 770 748 770 0.98

13 17 3.3e-05 0.0061 19.3 7.7 1 23 776 798 776 798 0.98

14 17 2.2e-05 0.004 19.9 7.1 1 23 804 826 804 826 0.97

15 17 0.00032 0.06 16.2 0.2 1 23 832 854 832 854 0.97

16 17 0.17 32 7.6 5.0 1 23 864 886 864 886 0.98

17 17 3.2e-06 0.00058 22.5 0.8 1 23 892 914 892 914 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00028	0.052	16.3	2.4	1	23	440	462	440	462	0.96
2	17	0.00014	0.026	17.3	1.8	1	20	468	487	468	490	0.94
3	17	6.1e-05	0.011	18.4	1.4	1	23	496	518	496	518	0.98
4	17	9.3e-05	0.017	17.9	4.4	1	21	524	544	524	546	0.95
5	17	0.00026	0.048	16.4	4.7	1	23	552	574	552	574	0.99
6	17	5e-05	0.0091	18.7	5.3	1	23	580	602	580	602	0.97
7	17	5.2e-07	9.6e-05	24.9	5.0	1	23	608	630	608	630	0.98
8	17	1.9e-07	3.5e-05	26.3	2.7	1	23	636	658	636	658	0.98
9	17	0.00014	0.026	17.3	6.7	1	23	664	686	664	686	0.97
10	17	8.3e-05	0.015	18.0	5.8	1	23	692	714	692	714	0.97
11	17	1.3e-05	0.0024	20.6	7.8	1	23	720	742	720	742	0.98
12	17	0.00013	0.023	17.5	8.1	1	23	748	770	748	770	0.98
13	17	3.3e-05	0.0061	19.3	7.7	1	23	776	798	776	798	0.98
14	17	2.2e-05	0.004	19.9	7.1	1	23	804	826	804	826	0.97
15	17	0.00032	0.06	16.2	0.2	1	23	832	854	832	854	0.97
16	17	0.17	32	7.6	5.0	1	23	864	886	864	886	0.98
17	17	3.2e-06	0.00058	22.5	0.8	1	23	892	914	892	914	0.96

Sequence Information

Coding Sequence: ATGAATTTTGGTTCATTAGCTCTGGGCCATCCTGTTTATCCACATGTTGTAGATTCTAGGATTCATTTCATTAATGTGAAAaATTCATCCCAAAGACCACCACCTGCAACATCAGTTCCTACGGATTTGAGGGTCAATACCACAGCATTGAATGCTGTGGCGTTAAGTAGTGTGGCTAAATACTGGGTGTTGACGAATTTACTTCCAGGACCAATTCCACAGGTTTCTGTATATGGATTACCAGGGTCTCGTGAAAATCAGGCAAAGCTCTCTCAGGAAGCGATGTTGAGTCAACATGGTTTGCTTCCAACAGACCCGCTGTTACTCCAGCAACACTCTCAGATCCCTGTGAGTATAGCGACATCTCAGGGAGTTGCTGCCAATCTCGCCATTCCCAGTAACTCAATGCATATGGAAAGTAACCAGCAGAGTCACAATTCTATGACCAGTCACCAGCAGCAACAACAGTCTGAGAATATGTCGCAGAACCAAAATAACATCGGCAGAGATCTTAGTCGAGATATGTCACACTCCCAACAGCAACCATCACAGCAGCCATCACAGCAACCACAACAGCAGAATCATGGCAATCAACAACAGAATATGGTGCAGGTCCAGGTACAAGATAACTTGGTGTCTGTGATAGAGGACAGCAACAAGGAGCAACAGAAAGAGATGATGCCACCCTCTCAGTTGTCTCAGAATCAGATGCAGATGAGCAATAACCATCAATTGAACCATCAGGCACTGACTGTTCAACAGCTACAGCATCTCCAAGTGCAGCAGGTTCTTGATAATGTGGTTAGAATGGAGAATTCTGTAGAAAATAACCAAAACCAAAGCAACAATGACCAAAACTCCatgaatggaaacattcaaatggTTAAAGATGAGAAAAATGTGAACGTCCAGAACTGCAAGCTTCTGCCAGGTACCCAGTTTGGCTTGCAGGAACTGAAAGGTAATATGATGGATGTAAGAACTGCAGATGGTAGTATTGTTAAGATAGCAACGAGCTTACAAGAACAGGAACTGGCCAAAACGCTGGGTGTCGAAATGGTACAGAATATGTATAAAGTTAACGTTGATGATCTCAATCAATTGTTGGCGTATCATGAAGTGTTTGGAAAACTCCAGGGGGAAATAGCTAATACGGGTCAAAATTTACAGAATATTATGCAGAATTCCTCTACGAATAATGTCACTCTACCACAGAATAATTCTGGTGGTAATATAGCTATTGTAGCCAAAGATGAACATGAACCTTCTACTAGTTCCATATCAACTGACAATTCTCCAACGGTTATCACAGGCACACATATATGCGATCTGTGCGGCAAGATGTTCCAGTTCCGTTACCAGTTGATAGTCCATCGACGTTACCACACTGAACGGAAACCTTTCACTTGTCAGGTGTGTGGTAAAGCATTCACCAATGCTCAAGAGCTCAGCAGACATGGCAAGTGTCATTTGGGTGGCAGTATGTTCACCTGCGCAGTGTGTTTCCACGTGTTTGCCAACGCACAGTCTTTGGAAAGGCACATGAAGAGACACTCCACTGATAAACCCTACAATTGTACGATATGTGGCAAATCGTTTGCCAGGAAGGAGCATTTGGATAATCACACCAGATGTCACACCGGAGAGACACCTTATAGGTGTCAGTTTTGTGCTAAGACGTTCACAAGAAAAGAGCATATGGTTAATCATGTAAGGAAACATACAGGTGAAACTCCACATCGCTGTGAGATTTGTAAGAAGAGTTTTACACGTAAGGAACATTTCATGAACCATGTCATGTGGCATACCGGAGAAACTCCTCATCAATGTACCATTTGTGGGAAGAAGTATACAAGAAAGGAGCATCTTGCTAACCATATGAGGTCACATACCAATGATACACCCTTCAGgtGTGAGATTTGTGGTAAATCTTTCACGCGCAAAGAACACTTCACGAACCACATAATGTGGCATACAGGCGAGACCCCTCACCGTTGTGACTTCTGTTCCAAGACTTTTACCAGAAAGGAACACCTTTTAAATCATGTCAGACAACACACAGGGGAATCACCTCACAGATGTGGATTCTGTTCAAAATCCTTTACAAGAAAAGAACATCTGATCAACCATGTGAGGCAGCACACGGgggagtctccccacaagtgtacttattgtacaAAATCCTTCACACGCAAGGAACATCTCAACAACCATGTGAGACAACACACTGGGGAATCCCCGCATAGATGCCACTTCTGTGCCAAATCTTTCACCAGAAAAGAACACCTCACCAACCACGTCAGGATTCACACTGGTGAATCACCTCACAGGTGTGAATTCTGCCAGAAAACCTTCACCAGGAAGGAGCATCTAACTAACCACTTGCGCCAGCACACTGGTGAGACCCCTCATTGTTGTAACGTGTGCTCCAAACCCTTCACACGCAAAGAACATCTCATAAACCACATGAGGTCCCATACGGGTGAGCGTCCTTTTGCTTGCGGTGAATGCGGTAAGTCTTTCCCTTTGAAAGGTAACCTTCTGTTTCACCAGCGTTCACATAATAAAGGTGCGAATGCCGATCGACCCTTTCGTTGTGATTTGTGTGAGAAAGACTTCATGTGTAAGGGGCATCTAGTGTCTCACAGGAGGTCTCATAGCGGTGAAAGACCTCACGCGTGTCCGGATTGCGGTAGGACTTTCGTGGAGAAAGGAAACATGTTGCGCCATTTGAGAAAGCATACAGCGGAGAACGGAATGCCTCCACCACCACCTCCTCCTCCGAATCCCGTGAGTTCACAGGGATCCACACAGCCACCGGTTAGTGTGGCGAACTTACAGATACCACAAGTTAGTCAGCCGCAACAACAGAGTACCAGCTCCAGTAGTAACATGCCGCAGAGCCCACATTTACCCATACACCAGTCACCCAGTCATCCCGTTGTCGTGCCTACAGCTAATGGTAACATTTTAGCTAGTTACTAA
Protein Sequence: MNFGSLALGHPVYPHVVDSRIHFINVKNSSQRPPPATSVPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGSRENQAKLSQEAMLSQHGLLPTDPLLLQQHSQIPVSIATSQGVAANLAIPSNSMHMESNQQSHNSMTSHQQQQQSENMSQNQNNIGRDLSRDMSHSQQQPSQQPSQQPQQQNHGNQQQNMVQVQVQDNLVSVIEDSNKEQQKEMMPPSQLSQNQMQMSNNHQLNHQALTVQQLQHLQVQQVLDNVVRMENSVENNQNQSNNDQNSMNGNIQMVKDEKNVNVQNCKLLPGTQFGLQELKGNMMDVRTADGSIVKIATSLQEQELAKTLGVEMVQNMYKVNVDDLNQLLAYHEVFGKLQGEIANTGQNLQNIMQNSSTNNVTLPQNNSGGNIAIVAKDEHEPSTSSISTDNSPTVITGTHICDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELSRHGKCHLGGSMFTCAVCFHVFANAQSLERHMKRHSTDKPYNCTICGKSFARKEHLDNHTRCHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHQCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLINHVRQHTGESPHKCTYCTKSFTRKEHLNNHVRQHTGESPHRCHFCAKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACGECGKSFPLKGNLLFHQRSHNKGANADRPFRCDLCEKDFMCKGHLVSHRRSHSGERPHACPDCGRTFVEKGNMLRHLRKHTAENGMPPPPPPPPNPVSSQGSTQPPVSVANLQIPQVSQPQQQSTSSSSNMPQSPHLPIHQSPSHPVVVPTANGNILASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00167784;
90% Identity: -
80% Identity: -