Telo031891.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- baz-2
- Assembly
- GCA_964006375.1
- Location
- OZ023264.1:49090737-49180835[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.18 3.5e+03 0.1 0.0 37 58 318 339 317 366 0.88 2 2 1.9e-17 3.7e-13 51.3 0.0 4 73 609 679 607 683 0.90
Sequence Information
- Coding Sequence
- ATGAATAGAATAGAAGCCTTTGAATTGTGGACATGGGGAACAATGACAAAGACAAGTCACACAAATAAAAGTGTGATAGAAAAGTTGAGAGAAGAAGgcGCAGCATGGTGGTCTATGGCTTCCCACCTGGCCGCCCAGGACTACCTGGCTAGATTGCAGGCTTCAGGACTGAATTTCCCCGGTTTAGCCAATCCAGCCGACCCTTATGCAGCTTTAGGTCTCCCAACACTATCTCAACATCACAAGTCGCTCAAGAACTCCAAGAGCAGCTCCTCACTGTCGAAATCTCAAGCTTCCTCCAAAGAGAAGTCCCACTCCTCGCAGTCCTCTGCTTCTAAGCTGGACGGTCGTTTGGAACAGAGTCTGAAATCTAGCGCCTCTTTGGGTGGAGGCAGTAAAAGTTCCTCTTCACCATATGGTAGCTCCTCGAAGTACTCCGGTTCTGGGTTGACAATACAGCCGAGTTTAAAGATGCCGGGTAGTGTCACTGGTGAGAAGAAACACTCCAAGGGTATGGCGGGAGAGTACTCTCCGTATAAACATCAGGGGGATAAGTCCAAGAGTACAAGTGTAAGTGCTAGTTGTAAAGTGTCCACTGCAACGCCTCCAAGTATCTTTTCAAGTCCGTTAAGTTTGGCCAGTAACAGTAGTAGTACGGACAAATCGTCTAGTGTTAATAGTAGTGTTAGTGCGTCACAGGGCAGCTTAACCAGCGGCGTTGCTGCTTTACCTTCCAGTATTTTAAGTGATCCCAACTCCATCCTAGGAGGCGTGAGGTTGCCGCCCGACACTGAAATCATCAAATACACCAGTTCCATAGTCGGGcccaaaattccaggaaccaccAACAGAGGGCGTAAGAAGACAATATCTCTGGATCCACCGTCTGTTAGTGTCCATGAATTACTTGCCGAAGCTTTATACCATGACAACGATGATGGTGATGAAGAGTCTCCCACGGGGCTGTCAGCCAACGATAGAGTGGAGGTGATAAAACTCCCGGCAACAAACGGCAGTCCGTCTGGTATTTCGATTCCCTCGTACAATGCAAGTAGTGAGCAATCAGGTGATACTCCACTCAACTTGTCACTGAAACCAAGTTCTACCACTACCACCGCTAACTCATCACTGAACTCTCTCAGCAATATGTCTGCCAACATAGGAGTCGATAGGATATCTCGTCGCAAACCTGGGCCGAAACCACGTCGTGTCATTCCTTCCTCGCAGATACAACCACCAGGTGCTCCTAGCGCCTCTCTGAACCAGCTGTTTGCCCAGGCTGATTCTCCACGTCCTCCCTCTCGAAATGAGGGTTCTGATGGAGGTAGTAGTACCTCATCTACTAGTGCTCCGATGATGCCTGGACTATCACATTTACCACCTGCTTCCAGCAGTTCAGGGGTTATGACTACCTCAATGGGGGGCGCCACAATAACTTCGTCGCTCTCCCCCATGCATAAGGAGGGTAGACCCAGGAATCTTGGAAGAGGGGTCAGTAAACCCAAGAAAAACACGGTGGCATCTTTGTTGGCACAGAGCAGGGCACTGGGCATAAAACCAATGCCGATGTTGGACCCCAATGCCTCAATGAACCAACAGATGAACCTGCTGAAGTCTAACATATTAGCAGCGCAGCAATACATAAGTGAGACTGGTGGTGATGAAAAAGCACTGAACAAATACTTACAGGAGAAATTCAGGGGTACGCTTAGTGACTCCAGTACGGTAGATGCCTCTACTGATTCTGATAATCTTACTGATTCTAATCACACTGATTCAGAGATGGAAACAGAGATTGCAACCAAAAAGCAGAAACAGTATGATGAGAGGCAGCTTAGGGTGCCCTTAGAAAAAGggTGGCGAAGAGAAACAATAATTCGGGGCCTAACAAAGAATGGTGGCATCAAGGGAGACGTTATGTACAGTGCACCTGACTCTAGcaataaattcaaacaaatgtCAGATGTAACTCAATACTTAGAATATCAGAAGAACTCGGAACTGACAAGGGACAACTTCACTTTCAGCTGTCGTGTGATATTAGGTGATTACCTTCAACCTGTACCTCCTGAAATGTCAATGGATGGAGAATATGCCCGTCTTTCTGAAGATGATGTCAATAAAAGGTTGGAAGAAATAAAGTCAGCTATGCGTACGAGTTTGCCTGTGGAACAACGAATAGAAATGGCACGGAAGCAACAGGCGGCAAGAGCGGCAGCTCGATTAGATAGGGAACAAGCTAGGTTGGCAAAGGAGTTGGAAAGGTCAGAAAGACAAGAAGCAGCTAGAAGGGATAGAGAGGCCAGATCACAGCAGATGCTGGAGGTAAGTGTTCTATGTTTTAACTTGATTATTGAAATTGTATTTTAG
- Protein Sequence
- MNRIEAFELWTWGTMTKTSHTNKSVIEKLREEGAAWWSMASHLAAQDYLARLQASGLNFPGLANPADPYAALGLPTLSQHHKSLKNSKSSSSLSKSQASSKEKSHSSQSSASKLDGRLEQSLKSSASLGGGSKSSSSPYGSSSKYSGSGLTIQPSLKMPGSVTGEKKHSKGMAGEYSPYKHQGDKSKSTSVSASCKVSTATPPSIFSSPLSLASNSSSTDKSSSVNSSVSASQGSLTSGVAALPSSILSDPNSILGGVRLPPDTEIIKYTSSIVGPKIPGTTNRGRKKTISLDPPSVSVHELLAEALYHDNDDGDEESPTGLSANDRVEVIKLPATNGSPSGISIPSYNASSEQSGDTPLNLSLKPSSTTTTANSSLNSLSNMSANIGVDRISRRKPGPKPRRVIPSSQIQPPGAPSASLNQLFAQADSPRPPSRNEGSDGGSSTSSTSAPMMPGLSHLPPASSSSGVMTTSMGGATITSSLSPMHKEGRPRNLGRGVSKPKKNTVASLLAQSRALGIKPMPMLDPNASMNQQMNLLKSNILAAQQYISETGGDEKALNKYLQEKFRGTLSDSSTVDASTDSDNLTDSNHTDSEMETEIATKKQKQYDERQLRVPLEKGWRRETIIRGLTKNGGIKGDVMYSAPDSSNKFKQMSDVTQYLEYQKNSELTRDNFTFSCRVILGDYLQPVPPEMSMDGEYARLSEDDVNKRLEEIKSAMRTSLPVEQRIEMARKQQAARAAARLDREQARLAKELERSERQEAARRDREARSQQMLEVSVLCFNLIIEIVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -