Telo056567.1
Basic Information
- Insect
- Tillus elongatus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_964006375.1
- Location
- OZ023266.1:161329047-161361621[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-111 5.6e-107 359.9 31.8 1 300 103 393 103 393 0.94 2 2 0.025 1.2e+03 0.9 3.9 120 164 391 435 390 466 0.82
Sequence Information
- Coding Sequence
- ATGGAGGAAACTGAGAAGATTGTATGTTGTAATGGTGTTCTTGAAGATGATGGTAATCGAGCATCTGAAACGTCAACGGAGGAAGACTGTGACAAGATTGCAATATCGGGTGTGACGATTACTGACAGTTCGGATGATATTCTTGGTGATGCGAACAATAAAATTAGTGAAAGTGACATTGGTACTTTAAGAAGTGACACATGTGATAATTCAGAGGAAGAAGAGGGCTGCAGTAAAGTTTGTGAACGTATTAAATTGGAGGAGGATGATGCCATTACGGATTTTATGCAAAGATCCTGTGATGCAGCGGAAGCACGATTGTGGGCCAAAAGACAGGCTAGAGCTGAGGCAAGGGAGATACGCATGCGCGAGCTGGAGCGCCAGCAGAAAGAACAAGAGGAGAATGCTGATAGACAGTTCGACATGCTGTCGGAGCCCCTGGTCAGGACCCCCAGGACTGCCGGCAGCAGGTATCTCTCCAGCAGACGGAGTTCTGAAGATTCCTTGGAAGATAGCGGCAGTCTCAGAGAAATGAGGCATGAGCTCAAAGAACTGGAAGACAAATTTCGGAAAGCGATGATAACAAATGCTCAACTTGACAATGACAAGGCAGCCCAAACATATCAGTTAGAACTTCTTAAAGATAGgTTAGAAGAATTAGAAGAGGAACATTCACAGTTGAAACGAGAACATAGAGATAAATGTAGGGAACACGATCAGTTAAAGAGGTTGTTTGTCAAACTGAAGGAAGACCTGGCTGTGACAAGGGCGGAGTTGGAAGAACGCGATCGTCTGATTGCAGAGAAAGGTTTAGTAATTGTCGGGGAAGATGTGCCACCAGAAACTAATGGAGAAACTAGTTCTAATTGTATACAGACACCTAAAAAGGCGTTAGTTAGTGTAGAGAATGCTCAGTTACTAGAAAGTGCCGGTGAAGGAAACTTAGATGTACGATTAGCAAAATTTGCTAAAGAAAAAATGGAACTCCAAGATCAAATTAGTAGCTTACGATTAGAATTAGAAGAAGAAAGAAATAGGAGAAGAAAAACTAGTTCTAGTATAACCCTAAACGGACCCACCTCAGAATATGACGATGCTTCGGATATTCAGAGGGAAGCTAGCAAACAACTGGGTGATTATAAGTTTAGGGTACAAAAAGCGGAACAAGACGTAGCAACATTGCAAGCGACCGTTGCCAGACTGGAGAGTCAAGTTATAAGGTATAAGGCTGCAGCAGAGGCTTCTGAAAAGGCCGAAGAGGCTTTAAAATCAGAAAAGAGAAAGCTTCAGAGAGAGGCTAGGGATGCCATTAGCAGAGCAGAGGAATTGGAAACTTCTAACACTCACCTCCTGAAAAGGCTGGATAAACTGAAGAATGCCAAGTCAGCGTTATTAAAAGAACTTTGA
- Protein Sequence
- MEETEKIVCCNGVLEDDGNRASETSTEEDCDKIAISGVTITDSSDDILGDANNKISESDIGTLRSDTCDNSEEEEGCSKVCERIKLEEDDAITDFMQRSCDAAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPLVRTPRTAGSRYLSSRRSSEDSLEDSGSLREMRHELKELEDKFRKAMITNAQLDNDKAAQTYQLELLKDRLEELEEEHSQLKREHRDKCREHDQLKRLFVKLKEDLAVTRAELEERDRLIAEKGLVIVGEDVPPETNGETSSNCIQTPKKALVSVENAQLLESAGEGNLDVRLAKFAKEKMELQDQISSLRLELEEERNRRRKTSSSITLNGPTSEYDDASDIQREASKQLGDYKFRVQKAEQDVATLQATVARLESQVIRYKAAAEASEKAEEALKSEKRKLQREARDAISRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -