Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_964006375.1
Location
OZ023266.1:89774295-89801799[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.7e-15 9e-11 43.9 0.2 76 116 27 66 16 66 0.90
2 3 0.74 1.8e+04 -2.2 0.0 29 65 197 233 190 236 0.79
3 3 0.19 4.7e+03 -0.3 0.0 15 53 259 297 257 307 0.87

Sequence Information

Coding Sequence
ATGCACACTTTTGAGGATTTCCTTCTGAAGGTGATGCCTGTTGCTACTATAAGGATCATGACGAGAATTGTAGTCACTTCGAACTGGGATTGTATATATGGATGTTATGTTCATTCCGCTATCCTACCCACCTTCCACCGACGCTGCTATTGGCTTCTTCAGAACCCTGACATTGTCCTGGTACACTACTTAAACGTTCCCTATCCTGACGACAACAAACTGGCTGTCATAACCCCTAACCTTGCTCTTTGGGCAGATAAAAAGGAATGGACCAAGGATGAATTGGTTTCTCAACTCAAGCCGATGTTTTTCAGTGAGGATGAGCCAGATCTCAACAACGAATTAGAAATATCGACTGCAGAAACGGTAGAAGCTATAGTTAGTCAATTAATGGAAAAGCAACGTGTAGCACGTCAGGCCGCCTTAGTGAAGCAGTTGGAATGCGGATGTCCAGATTCAACCTGTGCCGATGGCAAGAGCTGTTCCCATCCGATGAGGAGAATAACAGCTGCCAAGGATATGACAACCAGTTCTCCTTTACCCACTAGTTCTAATTCAAGACCACCTAGTAGAGCCGACAACAATAACCAAGTATCTTCCACTACTGGTACCGGCTCCATGTTAATGTCCAACAACAACTCTCCCAGAGTCTATTCCAGAGATTCCAGGAACCACCATCCAGGACAGAGTGGTAGCAACTGCTCTTCTAGTTCAGGCAACACTCCACCATTAGTACTTAGCTTATCTCAGATTCAAGGAGGAGGTGGTCTCCTCATACTCAACAGTAACTCCTCCACTTCTAGCAACTCTAGTCATCAAAATTTAGTAACACCTGTTTCCGTCTCAAATTTTGTTTGCAACACATCAAACAACCGCATACCAAAAAATGATTCAAGATCCGGGCATTTAGTACTTAAACAGGAAATTATGGATACAAACCCCTCAGCCTGTTGCCATTCCAATCAAGAAAATAAACGCCCTCGCGAAATTAAGATGGAAATTAACGATAACGTCCGACAATCAATTTTTGAGGTTCCCTACAGTAGACATCAGCAAACTTCAGAAGTAGTTATGTCCAGCGCTCCGTCAACACCATCTAAGCACATGGACACATCGAGTCATGAAGACGACATAAACGACTATAAGCACCAGAACTTCTGCGGCGAAACGGTAGTACTCTTAGGAACTGACTCTAGTGGTTCTCTTGTTAGTAAGAGCGACGGTTCTTCCATAATTAACGGCGGTTTCTTTAACGAGACTCTGGACCTTTCTCAAGAAGATATCCAAAGAACTCTTTCTGCCAATATGCCATTGTGTTCAACTGATCTAGAAAATCACCAACGACACAACTCGGAAAGCAACGCCTCAATGAATCAACACCACGCCAACAAGCAGGAACAAGTGCAAGACACTGCGATGACAACCGAGATAAACCCCATGGATTTTATAGATAACTGTGATGTTGTCGTGTCACCCACACATGTAGTCGACGACGACGTATTCGTTAATTTAGATGCTTTCGACATGCTGGGAGAGTTTCCTGATTTGGAATCGCTAGATTCTGCCCATAATGGTCTTCTAGAAGTTAATCCGTCCGAAAACAATAGAAGTGAGAAGACTCAGCCTGTACAGCAGACTCAAAGCAATCATCCAATGGAAGGGTCAGCAAAAATTACTGACTATTCTCCTGAATGGGCATATCCTGAGGGTGGCGTTAAAGTTTTAGTCACTGGACCTTGGCATTCGTCTGGACCGTACACTGTTCTGTTTGATACATTCCCTGTTCCCACAACGCTCGTACAAAGTGGAGTTCTCCGCTGTTATTGTCCTGCTCATGAGGCAGGTCTAGCAACTCTCCAAGTAGCGTGTGATGGCTATGTGATTTCCAACTCTGTGATATTTGAGTACAAGTTACCACCAAAAGAAGAACAAGTGACCGCTCCAGAACCAAAGGTTGAAAGATCAAAtgacaatttattaaaatttacacTACTACAAAGGCTAGAGGCTATGGATGATAGACTACAAATCAAACAAGAACCCAGCGATTCTCCTGACGTGATTGAAGATACAGCACTCTTCACACAGTCAAGTTTTGAGGATCGCTTGGTCTCATTTTGTCAAAATATGACAGCAAGAATATGGAGACATGGTGAAGAATTGAGTGTATCATGGTTTGCAAGTCATCGGGGAATGACATTGCTGCATTTGGCTGCATCTCTTGGTTATTCACGACTTGTATGTGCGATGCTTCACTGGAGAGCAGAGAATTCTTCTCTTTTGTTGGAAACAGAAGTTGATGCTCTAAGTCAAGATGAAGATGGTTGTACACCTCTGATGTGGGCTTGTGCTAGAGGGCACACAGAAACAGCAATAATGTTATATAAATGGAATCATCTGGCTCTGAAtataaaaaattctacaaatcaaACAGCACTTGAATGTGCAAAATCCAGTAACCATCCAGACCTTGTAAAGGAATTAGAAAAGCTTGAACTGAGGAGAAACAAAGCAAATATGCTTTTACATAGTAACAACAGTATCAACTCTGCAGTAGACACAGCATCACCTACTGCAATCTCACCAGCTAGTTCAATTGTGTCACTCAACTCTGTAGCATCAACAAATAAATCCCATGATGGTGTATTTTTAAGACCTGGAGCTGTAACAAGGAGTGAAACACATAAGTACAAAATGTTAAACCTGGATTTAGATTTAGATTCAACAATCATTGGCAGCAACAAAATGTTAAGTTCTGTACCTAGCCCCCTTCTTTCTGACTCGTCAAGTGGTCGAAACAGCAGCGGACAAAAATTAATCAAAAGACCTTCAGTGGATAGTGGAATCCACATGAGTTGTGGATTCTCATCAGAAATTTCAAACAGAAGATCCAAAGTCAGCACACGAGAAATACCCAAACTATCTAAGTAA
Protein Sequence
MHTFEDFLLKVMPVATIRIMTRIVVTSNWDCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPNLALWADKKEWTKDELVSQLKPMFFSEDEPDLNNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITAAKDMTTSSPLPTSSNSRPPSRADNNNQVSSTTGTGSMLMSNNNSPRVYSRDSRNHHPGQSGSNCSSSSGNTPPLVLSLSQIQGGGGLLILNSNSSTSSNSSHQNLVTPVSVSNFVCNTSNNRIPKNDSRSGHLVLKQEIMDTNPSACCHSNQENKRPREIKMEINDNVRQSIFEVPYSRHQQTSEVVMSSAPSTPSKHMDTSSHEDDINDYKHQNFCGETVVLLGTDSSGSLVSKSDGSSIINGGFFNETLDLSQEDIQRTLSANMPLCSTDLENHQRHNSESNASMNQHHANKQEQVQDTAMTTEINPMDFIDNCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLESLDSAHNGLLEVNPSENNRSEKTQPVQQTQSNHPMEGSAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPKEEQVTAPEPKVERSNDNLLKFTLLQRLEAMDDRLQIKQEPSDSPDVIEDTALFTQSSFEDRLVSFCQNMTARIWRHGEELSVSWFASHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGCTPLMWACARGHTETAIMLYKWNHLALNIKNSTNQTALECAKSSNHPDLVKELEKLELRRNKANMLLHSNNSINSAVDTASPTAISPASSIVSLNSVASTNKSHDGVFLRPGAVTRSETHKYKMLNLDLDLDSTIIGSNKMLSSVPSPLLSDSSSGRNSSGQKLIKRPSVDSGIHMSCGFSSEISNRRSKVSTREIPKLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01296195;
90% Identity
-
80% Identity
-