Rbic016447.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- CAMTA1
- Assembly
- GCA_029963845.1
- Location
- JANEYF010001344.1:6696054-6721426[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-35 8.7e-31 108.1 1.5 40 116 2 76 1 76 0.97 2 2 0.023 1.8e+03 0.7 0.0 27 65 205 243 196 248 0.82
Sequence Information
- Coding Sequence
- ATGTTGTTATATAGCAGGAAAAAAGTACGATATCGCAGGGATGGTTACTGTTGGAAGAAAAGAAAAGATGGAAAAACTACAAGGGAAGATCACATGAAATTAAAAGTACAAGGGACGGAAtgCATATATGGGTGTTACGTACATTCAGCAATACTACCCACGTTTCACAGGAGGTGCTATTGGCTTCTTCAGAATCCAGACATCGTGTTGGTCCACTACCTCAACGTTCCCTATCCAGATGATAATAAACTGGCTGTTATAACCCCAAGTCTTGCCCTTTGGGCCGATAAAAAGGAATGGACAAAAGACGAACTGGTATCCCAGCTGAAACCCATGTTTTTCAGCGAGGACGAACCAGATTTGAACAACGAACTGGAAATATCgacgGCGGAGACGGTTGAAGCGATAGTTAGTCAATTAATGGAAAAACAACGCGTTGCTAGGCAGGCGGCTTTGGTCAAACAGCTGGAATGTGGTTGCCCGGATTCGACATGCGCCGACGGCAAAAGTTGTTCTCATCCAATGAGAAGAATAACGGCGGCTAAAGATGTTTCCAGTTCCCCCTTGCCTAGCTCCAGTTCGAACTCACGTCCTCCAAGCAATTCCGACAACAACAACCAAGTATCCTCAACCACCGGTTCGGGTTCGATGTTGTTAACCAACAACAACTCCCCAAGAGTTTACTCTAGAGATTCCAGAAGTCACCAGGTAACCCAAAACAACAGTAATTGTTCATCGAGTTCAGGAAACACGCCTCCTCTCGTACTCAGTCTCTCCCAAATCCAGGGCGGCGGTGGGCTTCTTATACTTAACAGCAATTCTACAACACAAACCGGGGGATCCAAAAAGGAAGCCAGAACTAGTCATTTGGTGCTAAAACAAGAAGTTATGGATACTAATCCCTCTTGTCTTCATTCTTCCAAGCAGAATTCCAAGTCCAACTCTAGAGAAACAAAAATGGAAGTCAATGAAAACCTAAGACAATCAATATTTAACGATGGTTCAATATATGGAAATGCTCCACCaagACCaagatttttttacagaaaCCACCATCAGCAACAGACAGAAGTGATAATGTCCAGCGCTCCCTCGACGCCCTCAAAGCACATGGACACTAGTCAAGAAGAAAGCGTTGAAGACTTCAAGCATCAAAATTTCTGCGGCGAAACAGTAGTCCTTTTAGGAACCGACTCTAGCGGTTCTTTAGTTAGCAAAAGCGACGGTTCTTCCATTATAAACGGAGGGTTCTTCAACGAAACTTTGGATTTGTCCCAAGAAGACATCCAAAGAACCCTTTCAGCCAACATGCCTTTGTGTTCAACCGAACTAGATAGCCACCAACGACACAACTCAGAACCAAATAACACAAACCAACAAAACAAGACACAGTctgaacaacaaaatttaaccgCGGAAATCAATCCGATGGACTTTATCGATAGCTGCGATGTCGTAGTTTCGCCTACCCATGTAGTTGACGATGACGTATTCGTCAATTTAGATGCATTCGATATGCTTGGGGAGTTCCCTGATCTAGAAAGCTTAGATTCGAGCCATAACGGGCTCTTAGATGTCAATCCGTCCGAAGGTAGTAGAAATAGTGGTAAAACGCAGATTGagcaacaacaacaaaataacCATTCGATGGAGGGATCTGCGAAAATTACCGATTATTCTCCAGAGTGGGCTTATCCAGAAGGAGGAGTTAAAGTTTTAGTTACTGGACCATGGCACTCTTCTGGACCATATACAGTACTTTTTGATACATTCCCTGTTCCCACTACTTTGGTCCAAAGTGGTGTTTTACGTTGTTATTGTCCAGCTCATGAGGCTGGATTAGCTACTTTGCAAGTTGCATGCGATGGCTATGTGATTTCCAACTCTGTGATATTTGAGTACAAGTTGCCACCTAGAGAAGGGCAAGTGGCTGCTTCTGAACCTAAAGTCGAAAGGTCCAATGATAATTTGCTTAAATTTACGCTACTGCAACGGCTTGAGGCCATGGACGACCGACTGCAAATAAAGCAGGAACCTTCAGACGGAgatgtggtggaAGATACGGCCCTATTTGGCCAACCAAATTTTGAGGACAGGCTAGTTAACTTTTGTCAAAATATGGCGTCAAGGATATGGAGGCATGGCGAAGAATTAAGTGTGTCGTGGTTTGCTAGCCATAGAGGAATGACACTTTTACATTTAGCTGCCTCCCTGGGCTATTCTCGTTTGGTTTGTGCTATGCTCCATTGGAGAGCTGAAAATTCCTCACTGTTATTGGAAACTGAAGTGGATGCACTCAGTCAGGATGAAGATGGATACACACCACTGATGTGGGCGTGTGCTAGGGGCCACACCGAGACAGCAGTGATGCTTTACAAATGGAATCATACAGCACTTAACATGAGGAACACATTAAATCAAACAGCTCTTGAGTGTGCACGGGCCAATAATCACATGGAGTTGGTGAAAGAATTGGAAAAATTAGAATTACGAAGAGATAAGGCTAATATGCTTCTGCAATCAAATCAATCTTCCACGGATGCTGCTCCTTCCCCTACAGCTATTTCTCCTGCAAGTTCTATTGCTTCTTTAGCTTCTATTGCTTCTACTAGTAagtcccacgatggtgtcttcTTGAGGCCAGGAGCTGTGACAAGaaGTGAAGCCAACaagtacaaaatattaaatctaGATTTAGATTCAGATGGGAACAACAAAATGATAACTTCTACTCCAAGCCCACTCCTCTCAGATTTTTCAGTCCAGCACTAG
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFFSEDEPDLNNELEISTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITAAKDVSSSPLPSSSSNSRPPSNSDNNNQVSSTTGSGSMLLTNNNSPRVYSRDSRSHQVTQNNSNCSSSSGNTPPLVLSLSQIQGGGGLLILNSNSTTQTGGSKKEARTSHLVLKQEVMDTNPSCLHSSKQNSKSNSRETKMEVNENLRQSIFNDGSIYGNAPPRPRFFYRNHHQQQTEVIMSSAPSTPSKHMDTSQEESVEDFKHQNFCGETVVLLGTDSSGSLVSKSDGSSIINGGFFNETLDLSQEDIQRTLSANMPLCSTELDSHQRHNSEPNNTNQQNKTQSEQQNLTAEINPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLESLDSSHNGLLDVNPSEGSRNSGKTQIEQQQQNNHSMEGSAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREGQVAASEPKVERSNDNLLKFTLLQRLEAMDDRLQIKQEPSDGDVVEDTALFGQPNFEDRLVNFCQNMASRIWRHGEELSVSWFASHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGYTPLMWACARGHTETAVMLYKWNHTALNMRNTLNQTALECARANNHMELVKELEKLELRRDKANMLLQSNQSSTDAAPSPTAISPASSIASLASIASTSKSHDGVFLRPGAVTRSEANKYKILNLDLDSDGNNKMITSTPSPLLSDFSVQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00244262; iTF_01442576; iTF_00436947; iTF_00722037;
- 90% Identity
- -
- 80% Identity
- -