Tcit041427.1
Basic Information
- Insect
- Tiliacea citrago
- Gene Symbol
- -
- Assembly
- GCA_963921375.1
- Location
- OY992807.1:2889314-2892523[-]
Transcription Factor Domain
- TF Family
- IRF
- Domain
- IRF domain
- PFAM
- PF00605
- TF Group
- Helix-turn-helix
- Description
- This family of transcription factors are important in the regulation of interferons in response to infection by virus and in the regulation of interferon-inducible genes. Three of the five conserved tryptophan residues bind to DNA.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.021 1.1e+03 1.5 0.0 28 52 115 139 110 145 0.91 2 19 0.021 1.1e+03 1.4 0.0 28 52 152 176 148 182 0.91 3 19 0.021 1.1e+03 1.4 0.0 28 52 189 213 185 219 0.91 4 19 0.021 1.1e+03 1.4 0.0 28 52 226 250 222 256 0.91 5 19 0.021 1.1e+03 1.4 0.0 28 52 263 287 259 293 0.91 6 19 0.021 1.1e+03 1.4 0.0 28 52 300 324 296 330 0.91 7 19 0.021 1.1e+03 1.4 0.0 28 52 337 361 333 367 0.91 8 19 0.021 1.1e+03 1.4 0.0 28 52 374 398 370 404 0.91 9 19 0.021 1.1e+03 1.4 0.0 28 52 411 435 407 441 0.91 10 19 0.021 1.1e+03 1.4 0.0 28 52 448 472 444 478 0.91 11 19 0.021 1.1e+03 1.4 0.0 28 52 485 509 481 515 0.91 12 19 0.021 1.1e+03 1.4 0.0 28 52 522 546 518 552 0.91 13 19 0.021 1.1e+03 1.4 0.0 28 52 559 583 555 589 0.91 14 19 0.021 1.1e+03 1.4 0.0 28 52 596 620 592 626 0.91 15 19 0.021 1.1e+03 1.4 0.0 28 52 633 657 629 663 0.91 16 19 0.021 1.1e+03 1.4 0.0 28 52 670 694 666 700 0.91 17 19 0.021 1.1e+03 1.4 0.0 28 52 707 731 703 737 0.91 18 19 0.022 1.1e+03 1.4 0.0 28 52 744 768 740 773 0.91 19 19 0.0039 2e+02 3.8 0.1 28 55 781 808 777 819 0.89
Sequence Information
- Coding Sequence
- ATGTTCTACTCGCTATGCCTGAGCCATTCCTATCTGCCGTACGACTTCATGAGAACAGTGGTGGTGCCTGTAGTGAAGAATAAAACTGGTGATCTAGCCGATAAGACtaactacaggcctatttctCTTGCTACTGTTATAGCAAAAGTGTTTGATGGTTTGCTGGATGCACAGTTACAAAAACACGTGACGTTGCACGAcaatcaatttggttttagaccCAAATTGTCTACAGATAGTGCAATACTGTGCCTCGAGCATACCGTCAGATACTATACTGATCGTAAAACTCCAGTTTACGCGTGTTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATTTCCTCGACCTGTCCAGGGCTTTTGACCTTGTGTCGTATGACGTGCTATGGCGGAAACTTGAGAGCACGAACATGCCACATGAACTTGTGAACATCTTCAAGTATTGGTATGCACACCAGGTCAACAGTGTCAGATGGGCGGGTGTATTGTCAGAGTCGTACAAGCTTGAATGTGGAGTGAGACAAGGTGGATTAACTTCCCTCACACTGTTCAATCTGTACATGGATGCACTCATCGTCGCGCTCAGTAGCCACCATGTTGGCTGCCACGTTGATGGTGTATGTGTAAACAATCTGAGTTAcgcagacgacatggtgctaCTGAGCGCGTCGGTCTGTGGAATACGCAAGTTATTGCAAGTGTGTGAGGGTTACGCGAACACACACGGCCTCATGTATAATGTCGCTAAAAGTCAATACATGGTCTTTCAGGCCGGCGCCAAATGCTCTCAACTTGTACCACCCATTCGCCTGAATGATGTACCGTTGGAACGGGGGGACCAATTTAAATACTTGGGGCATTGGGTAACAGCCGACTTGAGGGGCCATGTGGACATCGAAAGGGAGCGGAGGGCACTGTCGAAAAGAGCAAATATGATagcccgtagagcggtgttggggctgccccgcttctgcagtgcctcgggcatgtttgcggaagcgCACACAGACTGTTTCCACACCACCATGCGCAAGCGGTGCgcgtccttggtgcgcagggtgcggcAGCTCCAATACAGTGCTGGCGATGATCGCCGGGAGATTTGA
- Protein Sequence
- MFYSLCLSHSYLPYDFMRTVVVPVVKNKTGDLADKTNYRPISLATVIAKVFDGLLDAQLQKHVTLHDNQFGFRPKLSTDSAILCLEHTVRYYTDRKTPVYACFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYFLDLSRAFDLVSYDVLWRKLESTNMPHELVNIFKYWYAHQVNSVRWAGVLSESYKLECGVRQGGLTSLTLFNLYMDALIVALSSHHVGCHVDGVCVNNLSYADDMVLLSASVCGIRKLLQVCEGYANTHGLMYNVAKSQYMVFQAGAKCSQLVPPIRLNDVPLERGDQFKYLGHWVTADLRGHVDIERERRALSKRANMIARRAVLGLPRFCSASGMFAEAHTDCFHTTMRKRCASLVRRVRQLQYSAGDDRREI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -