Taur017494.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiliacea aurago
Gene Symbol
-
Assembly
GCA_948098905.1
Location
OX402603.1:4104139-4149267[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.16 13 7.1 0.4 3 21 68 86 67 87 0.88
2 16 0.034 2.8 9.2 4.3 2 23 148 169 147 169 0.95
3 16 0.22 18 6.7 1.2 1 23 181 205 181 205 0.91
4 16 0.00019 0.016 16.3 0.3 2 23 212 235 211 235 0.96
5 16 0.14 12 7.3 0.4 1 23 241 263 241 263 0.93
6 16 0.0021 0.18 13.0 2.9 1 23 269 291 269 291 0.98
7 16 0.17 14 7.0 0.2 2 19 302 319 302 322 0.91
8 16 0.025 2.1 9.6 0.2 1 23 401 423 401 423 0.97
9 16 1.3 1.1e+02 4.2 7.2 1 23 430 452 430 452 0.95
10 16 0.00087 0.073 14.2 1.8 1 23 502 525 502 525 0.95
11 16 0.00031 0.026 15.6 0.5 1 23 532 555 532 555 0.98
12 16 0.0024 0.2 12.8 0.2 2 23 577 599 576 599 0.96
13 16 0.0015 0.13 13.4 3.5 3 23 625 646 624 646 0.95
14 16 0.00019 0.016 16.3 1.2 1 23 671 693 671 693 0.96
15 16 7.6e-05 0.0064 17.5 0.1 1 23 699 721 699 721 0.97
16 16 0.00024 0.02 15.9 0.7 3 23 729 750 727 750 0.95

Sequence Information

Coding Sequence
ATGAAACACTTCTTCTACAAACAGACGGAGCCACCCATCATAAAAACGGAGGTAAAGCAAGAAACCCTGGACAGCAGTGAGGATGAGATCTGGATCGTTCAGACTGCTGATGCTGAAGCCACACAGGAGCTGCAGAAACTACTCTGTAGTGCTAAGGTTAAAGAAGATGGACAAGATGGTGAATCTGAAAAGACACCCAAATGTATTAATTGCGGTCAAATATTCGCCAACGCAGATGGCCTGTCAAACCATCGCTGTAGAAGACGCAACCGTAAGCGGAAGTCCAAGGACAACCTTATATGTATTCCTACTGAGGAAGACTTTTTGAAGAGAGCTCAGGGACGCCCTCGACCAGCAAATACATCAATAGACAATGatcttcttgctatgTGTCCCCGAAAACGCCGCAGCCGGGAACCGACCTCCAACCCTCAAGTGGTGACTTGCCACAACTGTAACCAGTCCTTCACATCCAAAGTTAGACTCAAGTTTCATATGCAGTTCCACGAAATATCAAACGAAGTCCGTTCAGACGGGCGCTACTCCTGCTCCGAGTGTGATGACACAACCTTCGCCACGGAGACGGAGCTCTTCGACCACGTGCACTTCCAGCATGACAAGCAGAAGAGGTGGCAGTGTCCCGTTGAGGGCTGTGGGAAGACTTTCTTCCTCAGGGCAACCCTAACCAAACACAGTCGCTCGCATACAGACACACGGCGCTATGTGTGTGTTACATGTAACAAGAGGTTCTTGGACAAACAGACGCTAGATGAGCATGGAGTGACACATTTGCAGATAAAACCCTTCCAATGCCACATATGCCTGAAACAATTAACCCGCCGCTCGCGCTTGCGCATGCATGTGCGCGCGCACGAAGAGGAGTTGGCGCCGAGGCTTGTGCGCGTCTGTGCGGTCTGCAAGAGAGCTTTTAGAGATCATCGGAATGCACAGGAGCACGCATATAAATCAACGGAATGTATCGAAGCTTTCGCAAACGAGTTAAAAGAAGAGGCTGAAGAGGTGTCGGTACAGTTGTCGCCTACCAGTGGATTAGTCAGACATACTGTGCAGGTTATTGAATCTCCAAAACTGTCAAAGCCAATCGAACGCCAAGTGACGAACCAAGTCGGCGAGCCACTTCTGTCTCAGTTAGCTGATGAAGCGCGCGCTTTGATAAGGGTGGTCGAGATCGAGAAGGCGTTCCGCTGCGAGTATTGTGAAGATGTGTTCTACTTGGAGAGCGGTCTAAACACGCACCGCGCTATACACAAGGGAGTCAAGAATCCCTTCACTTGCCACATATGTAAAGTTAGCTTCGCGACTTATTCCAGATGCACAACCCACAAAACAACCCACGGCTTCTACAAGCGCTCACTAGCCGACGCTATGAAACAAAACGCCGCAAAGAAACAAGCCGACGGCCCCGCGCAAGCCGACGCCGAATCCTCCACACGCTCTGCCACCGGCATACTGGGATACGGCGACTTTCCTGTAGTCAAACATTTCCTGTGCGAGGATTGCGGGCGCTCATACCTGCACTGGACGTACTTACAAGTACACAGACGGATGAAACACGCCAACGAGAATTTTCTGTACAAATGTAACCAGTGCGAACTTACCTTTCCAAACAGCTGGGGCCTGGCGTACCATCGTAAGAAGGTGCATGGCAAGATTGGACCTGACGACCCTGGAACCACTAACAAGATCAACAGGAATGATTATAGGATACCGTGTCGGGATTGTGACGAGGTGCTGCCGAACAAAACAGCTTTATACAAGCATCGTAAGAAAGAACACAGCCATGGAAATTCACGGGCTTATTCTAAACCAGGCATGTATGTGAGCGCAGAGTTAGAATCTACAGGTGGGGCGTGTTCCCATTGTCACGCCACGTTCACGCACGCGATTGACCTGCGCAAACATGTCAAAGAGGTCCACGGCAAAGACGACGGGTCCTGCTTATCCTACAACAAGACATCGACCACAGAAGGGACATGTCCGCGCCGTCCACACGCGTGTCCCGTCTGTGGACACGCTTTCCGGACACTTTCTATGCGGAACGAACATCTGAGGGTACACACAGGGGAGAGACCCTTTCCTTGTGATGTGTGTGGAGTTGCATTCAGGAGGTCCACAGCTATGCGGAACCACCGCCTCATCCACACGGGCGTGCGCGCATGGGCGTGCGGACGTTGTCCCAAGCGCTTCCGTATCCGCTCCGACCTGAGAACGCACCTGCGGCTCAAACATCCTGCTACTATTGTAATTGTAGAGATGGAGGGCCTCAACCCGTCGCCTGAAGAAGTACTGAAGGCGCTCGCTGCACAAGACGTTCCACACGACAAGCTTATAGATATCACTAAGATGTCCTTCACAAAGGGCTCAACGAGCGTGATTCCGACGTGCACGCGCGCACTATCAGCTCTGAACAACGTGCCGCGCACGCACGTCGCGTGCATCAAGCCTACACCAACACTGGCAGACTTTCAACCGGCTCGACGCGGTCGTGGCATCGCTAAAACCCCGCGGCGACCCAAGATACTACAGCGAAGGGAAGCGGAGCCACACGACAACTCTGCCTACCCGATCGTTGGTGGCGAAGTGAATATATTTACATTATATTATTTTCTCAATACCTGCTCGATAATGGCAAATTATATGTCATGA
Protein Sequence
MKHFFYKQTEPPIIKTEVKQETLDSSEDEIWIVQTADAEATQELQKLLCSAKVKEDGQDGESEKTPKCINCGQIFANADGLSNHRCRRRNRKRKSKDNLICIPTEEDFLKRAQGRPRPANTSIDNDLLAMCPRKRRSREPTSNPQVVTCHNCNQSFTSKVRLKFHMQFHEISNEVRSDGRYSCSECDDTTFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRSHTDTRRYVCVTCNKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCKRAFRDHRNAQEHAYKSTECIEAFANELKEEAEEVSVQLSPTSGLVRHTVQVIESPKLSKPIERQVTNQVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAMKQNAAKKQADGPAQADAESSTRSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWGLAYHRKKVHGKIGPDDPGTTNKINRNDYRIPCRDCDEVLPNKTALYKHRKKEHSHGNSRAYSKPGMYVSAELESTGGACSHCHATFTHAIDLRKHVKEVHGKDDGSCLSYNKTSTTEGTCPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVIVEMEGLNPSPEEVLKALAAQDVPHDKLIDITKMSFTKGSTSVIPTCTRALSALNNVPRTHVACIKPTPTLADFQPARRGRGIAKTPRRPKILQRREAEPHDNSAYPIVGGEVNIFTLYYFLNTCSIMANYMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00831499;
90% Identity
iTF_00831499; iTF_00374513; iTF_00274656;
80% Identity
-