Basic Information

Insect: Tiliacea aurago
Gene Symbol: -
Assembly: GCA_948098905.1
Location: OX402606.1:3200984-3267912[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00025 0.021 15.9 5.5 1 23 19 41 19 41 0.98

2 16 0.024 2 9.7 6.8 1 23 47 70 47 70 0.97

3 16 0.0053 0.45 11.7 7.7 1 23 76 98 76 98 0.98

4 16 5.1e-05 0.0043 18.1 0.9 1 23 104 126 104 126 0.97

5 16 9.3e-05 0.0079 17.2 3.4 1 23 132 154 132 154 0.98

6 16 8.4e-05 0.0071 17.4 0.5 1 23 161 184 161 184 0.91

7 16 5.6e-06 0.00047 21.1 0.1 2 23 193 215 192 215 0.96

8 16 0.0015 0.12 13.5 0.3 2 23 222 242 221 242 0.96

9 16 7.2e-05 0.0061 17.6 1.0 1 23 248 272 248 272 0.91

10 16 0.00014 0.012 16.7 1.7 1 21 278 298 278 299 0.95

11 16 0.0014 0.12 13.5 0.5 2 23 304 326 303 326 0.96

12 16 0.2 16 6.8 0.1 1 23 335 358 335 358 0.94

13 16 0.75 63 5.0 6.9 2 23 365 386 364 387 0.95

14 16 0.6 51 5.2 7.6 1 23 729 751 729 751 0.91

15 16 7.5 6.3e+02 1.8 0.4 2 13 762 771 761 782 0.68

16 16 0.026 2.2 9.5 0.9 1 23 908 930 908 930 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00025	0.021	15.9	5.5	1	23	19	41	19	41	0.98
2	16	0.024	2	9.7	6.8	1	23	47	70	47	70	0.97
3	16	0.0053	0.45	11.7	7.7	1	23	76	98	76	98	0.98
4	16	5.1e-05	0.0043	18.1	0.9	1	23	104	126	104	126	0.97
5	16	9.3e-05	0.0079	17.2	3.4	1	23	132	154	132	154	0.98
6	16	8.4e-05	0.0071	17.4	0.5	1	23	161	184	161	184	0.91
7	16	5.6e-06	0.00047	21.1	0.1	2	23	193	215	192	215	0.96
8	16	0.0015	0.12	13.5	0.3	2	23	222	242	221	242	0.96
9	16	7.2e-05	0.0061	17.6	1.0	1	23	248	272	248	272	0.91
10	16	0.00014	0.012	16.7	1.7	1	21	278	298	278	299	0.95
11	16	0.0014	0.12	13.5	0.5	2	23	304	326	303	326	0.96
12	16	0.2	16	6.8	0.1	1	23	335	358	335	358	0.94
13	16	0.75	63	5.0	6.9	2	23	365	386	364	387	0.95
14	16	0.6	51	5.2	7.6	1	23	729	751	729	751	0.91
15	16	7.5	6.3e+02	1.8	0.4	2	13	762	771	761	782	0.68
16	16	0.026	2.2	9.5	0.9	1	23	908	930	908	930	0.98

Sequence Information

Coding Sequence: ATGAAGGAGAAAACTAAGAAGAAAAGTGCTAAAGCTAAGCAACAAAAATATGTTTATACATGTCCACATTGTCATAAGCAATTCGACAACGCATCGAACTGGCACAGCCATGTCAAGCTCCATTCAACTGAAGAACCGTACCATTGTGACCTCTGTGACTACAAGTGTAAGGTCCAGAAGTACCTCACTCGGCACGTAAAGAAGACACACACTAAGCCGACCGGCCATCAATGTCCTGTGTGCGCGAAATGCTTCCATTTTGACTGCAACCTCCGGGCTCACATGAGAGTGCATACTGGGGAAAAACCATTCAAATGCACCGTGTGTGACAAGGCGTTTAATTCACGTTACTCATTGAGCGGACACAAGTTGATACATACTGGAGAGAAACCATTTCAATGTCAGTACTGTGATTACGCTTGTCGGGACAATTCTACGATCAGAAGGCACATGGAGAGACACCTAGGAATATCTAAAGACTATCCCTGTTCTATATGTAAAAAGAATTTTAAAAAGAAGGAGACATTACAAATTCATGTTGATGAGGTACATTTTGAGCTGGATACCAGGAAGCTTCCCTGTGACCTGTGCGATAAAGTCTTCAAAACTAAAGGGACGCTAAATATACATGTTAACACAGTCCATAAGAAAACAAATCGTATAAAATGTGAGATTTGCGGCATCCTCTCTACTAAGAACAATTTACAGGCGCATATGAGGCGACATATAGATGTTAGGCCTTACAAGTGTAGCTACAAGCCGTGTGGAAAGAGGTTTAAAGATAAGGGCGACCTCAAACGCCACCAAGTAATCCACTACCCAGAGAACCAACACGTGTGTACTGGTTGCAACAGACGGTTCCCTCGCAAGTTCAGACTGACCAGACATATACGGAATGGGTGTCGAGTGCAGTGCCACTATTGTGGACAGTTATTTACAGCCAAAATTTACCTGGCTCAGCATATAAAGAATGCTCACGGCCCCTATCCGAAGTCGAGAGAGTACTTATGTGACATCTGTGATATGGTCACCTATAGCAGGAGAGGTATCATACAGCATTTAAAATATGGACATGGCACTGAAAAAGACACGAAATGTCAAATATGCAAAAAGGATTATTTTAAATGTCAAACTTTGAAGGAACATTATTTGAGCCATCACAACCTTCTATACACTTTATTAGATAAAAAAAAAAAAGATAAAATTGCAATAAAAGAGGAACCTTTAGAAGAAGTAGAAGAGGTGGGAGACTCACCAGATTTTATGTATGAAGTGGAAATACAGAAACATGAAGTAGATGATGCCCCACCAGAACCACCACTACTGCCCACCAGCCCAGAACACTTCACCATAGACTCCGATACCATTACTTACTCAAAGAAGGTGCTATCAGAGGACATATCACGAAGTCTGATAGAACGGGATACTATGACGGACGTGTTCGATGACTTCTTCATTGGACACGTACTGAAGAAGCCTGAGGAAGTTCTTAAACTGCCAAAACAAATAGTAGATGAGGAAAAGAAAAAGCGTGTGGATAAGCGTTTAGAAAAACTCCTAGTCGAGGCAAGAGTACGCAATCAATGGGTGGTTTTGGAGAAATTACGGAGACAATACAACCGACGAATCAAAATGGCGACCAGCGGTGGAGATAAAAAAGAACAAAAATCCGTTAGATATTTCAAAAAACCAGAAAATAATAACGAATCTATTGAATCACAAGAAAATGCCAATGATAAAGAAACCCACATTGGAGATAATGTTAAAATAGATAATCAAGCAACTGACGATATTAACCAACAAAAGATTGATTCAGAAAAAGAAAACAGTAAAAAGATTAATGATTATGATGAAAACGGTGAATATAGAATCATTGATGAAGAAGTTGCTGACAAAAATCGTGATAGAATAATTGATGATGAACATGCTGACAAAAATCGTGATGAAGAAGTTGCTGACAAAAATCGTGATAGAATAATTGAAGATGAACATGCTGACAAAAAACTTGATGAAATAATAAATGATGAAGAAATTGCTGACAAAAATTGTGATCAGACAATTAATGATGATGATATTAACGATGAGATTATAGATGATATAAAAGATCTCGATTATAAAGACAGTGATTTTGAAAATAATAGTGATGAAGAAACCAATCCTAATGGAAAACTGAAGTTTAATACGCATCAGTGTTATATTTGTTTCAAGCTCTTCAAAACGAAAACAGAGTTAAAACTCCACTGCAAACAACATTTCGATATATGCAACGAAAAAATGCTCAAAAAGTGTCCCTTCTGTGGATATGTTACCAACCTTACAATAACAAGACACATTAAACTCGTCCACAAAATATCCATCGACATACCATACGGACGTATAAAAGAAAGGGACACACAGAACGGATCTAAATATGTCTTTGAAATCGATAAAGATTGTGACTTAGAAGTTATACCGAGTATAAGCAACCTAAACAAAATCGCATCAATGAAAATCGATGAGAAAAATCGAGAATCGAAAAACATATTCCTGGGAACGACGAAGTTGGTCAAAAAGGGGGGTGATTGGATGGTGGAAAAGCAGAAAGTTGATATCAATAACGAATATGTTTTACCAAAGTTTTGTGACGAAGATTATCAAGCTTTAAAATCTATTGGAGATAATTACTTGGAACAGATAAGAAGTTTGAGTATTATAGCCAAGAAAAAAGGCTTAAAAATACTTTATCCATGTGAAGGATGTGACAAAATTTGCCTTACAATGAGCGCTTTAAAACTGCATAACAGAAAACATGAAGCCAACCCAAAGAGATTTAAACCTAAAGTGTGGAAGAATAAGATCTTAATTGGCTTAGGTGGTAGATATAGTCATGTTAACAAAAATAATAAGAAAAAAAAACACAGCAATAATAAACAAAATAATAATAGTGATGTTACTAATCAGAATAGAGGTAAAAGCAATCCAAAAAGAAACCATTTATTAGAAAAAATCAGTAAAAAAGAAAACGTTTCTGAACCAGTAGCAAATCGATTTGCCGATCCGAGTCCCGTGAAAAACAATCACAAATGTGACAGAAAACTGATAGAATTCTATCACAAAAACATAAAAGGAGGTGACATAGAATTCTGGCAATTTTTGAAGATTTTTAACAAAATGAGTCGTGAAAATGTGAATGATTTTAAAGATTTGGAAAATCGACATGATTTTGGTATGCATAATATCATCCGTTACGATGAAATTACTACCGAGAATAATACAGAATCGAATAAAGATGATATAATAGAGAATACTCAGGTTATACCTAAAAGAGGTAGAAGAAAGAAGAAAGCGTTTACTAGAGTAATTATGATTAGTAAAAAAGAGTATTTAAGAAGGCTTGAGATTAAAAACCAAATGAGGCAAAGGATAGAACGGTCGGAAACTTAA
Protein Sequence: MKEKTKKKSAKAKQQKYVYTCPHCHKQFDNASNWHSHVKLHSTEEPYHCDLCDYKCKVQKYLTRHVKKTHTKPTGHQCPVCAKCFHFDCNLRAHMRVHTGEKPFKCTVCDKAFNSRYSLSGHKLIHTGEKPFQCQYCDYACRDNSTIRRHMERHLGISKDYPCSICKKNFKKKETLQIHVDEVHFELDTRKLPCDLCDKVFKTKGTLNIHVNTVHKKTNRIKCEICGILSTKNNLQAHMRRHIDVRPYKCSYKPCGKRFKDKGDLKRHQVIHYPENQHVCTGCNRRFPRKFRLTRHIRNGCRVQCHYCGQLFTAKIYLAQHIKNAHGPYPKSREYLCDICDMVTYSRRGIIQHLKYGHGTEKDTKCQICKKDYFKCQTLKEHYLSHHNLLYTLLDKKKKDKIAIKEEPLEEVEEVGDSPDFMYEVEIQKHEVDDAPPEPPLLPTSPEHFTIDSDTITYSKKVLSEDISRSLIERDTMTDVFDDFFIGHVLKKPEEVLKLPKQIVDEEKKKRVDKRLEKLLVEARVRNQWVVLEKLRRQYNRRIKMATSGGDKKEQKSVRYFKKPENNNESIESQENANDKETHIGDNVKIDNQATDDINQQKIDSEKENSKKINDYDENGEYRIIDEEVADKNRDRIIDDEHADKNRDEEVADKNRDRIIEDEHADKKLDEIINDEEIADKNCDQTINDDDINDEIIDDIKDLDYKDSDFENNSDEETNPNGKLKFNTHQCYICFKLFKTKTELKLHCKQHFDICNEKMLKKCPFCGYVTNLTITRHIKLVHKISIDIPYGRIKERDTQNGSKYVFEIDKDCDLEVIPSISNLNKIASMKIDEKNRESKNIFLGTTKLVKKGGDWMVEKQKVDINNEYVLPKFCDEDYQALKSIGDNYLEQIRSLSIIAKKKGLKILYPCEGCDKICLTMSALKLHNRKHEANPKRFKPKVWKNKILIGLGGRYSHVNKNNKKKKHSNNKQNNNSDVTNQNRGKSNPKRNHLLEKISKKENVSEPVANRFADPSPVKNNHKCDRKLIEFYHKNIKGGDIEFWQFLKIFNKMSRENVNDFKDLENRHDFGMHNIIRYDEITTENNTESNKDDIIENTQVIPKRGRRKKKAFTRVIMISKKEYLRRLEIKNQMRQRIERSET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00364269;
90% Identity: -
80% Identity: -