Basic Information

Insect: Conistra vaccinii
Gene Symbol: -
Assembly: GCA_948150665.1
Location: OX411343.1:4159448-4191195[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00025 0.02 15.9 5.5 1 23 21 43 21 43 0.98

2 16 0.011 0.86 10.7 5.7 1 23 49 72 49 72 0.97

3 16 0.00034 0.027 15.5 8.8 1 23 78 100 78 100 0.98

4 16 2.6e-05 0.0021 19.0 0.9 1 23 106 128 106 128 0.98

5 16 9.4e-05 0.0075 17.2 3.4 1 23 134 156 134 156 0.98

6 16 8.5e-05 0.0068 17.4 0.5 1 23 163 186 163 186 0.91

7 16 1.8e-06 0.00014 22.6 0.2 1 23 194 217 194 217 0.97

8 16 0.0086 0.69 11.0 0.4 2 23 224 244 223 244 0.97

9 16 3.5e-05 0.0028 18.6 1.0 1 23 250 274 250 274 0.92

10 16 0.00023 0.018 16.0 1.1 1 21 280 300 280 301 0.95

11 16 0.0014 0.11 13.5 0.5 2 23 306 328 305 328 0.96

12 16 0.2 16 6.8 0.1 1 23 337 360 337 360 0.94

13 16 0.37 30 5.9 3.6 2 23 367 388 366 389 0.95

14 16 0.049 3.9 8.7 6.5 1 23 743 765 743 765 0.91

15 16 7.5 6e+02 1.8 0.4 2 13 776 785 775 796 0.68

16 16 0.026 2.1 9.5 0.9 1 23 922 944 922 944 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00025	0.02	15.9	5.5	1	23	21	43	21	43	0.98
2	16	0.011	0.86	10.7	5.7	1	23	49	72	49	72	0.97
3	16	0.00034	0.027	15.5	8.8	1	23	78	100	78	100	0.98
4	16	2.6e-05	0.0021	19.0	0.9	1	23	106	128	106	128	0.98
5	16	9.4e-05	0.0075	17.2	3.4	1	23	134	156	134	156	0.98
6	16	8.5e-05	0.0068	17.4	0.5	1	23	163	186	163	186	0.91
7	16	1.8e-06	0.00014	22.6	0.2	1	23	194	217	194	217	0.97
8	16	0.0086	0.69	11.0	0.4	2	23	224	244	223	244	0.97
9	16	3.5e-05	0.0028	18.6	1.0	1	23	250	274	250	274	0.92
10	16	0.00023	0.018	16.0	1.1	1	21	280	300	280	301	0.95
11	16	0.0014	0.11	13.5	0.5	2	23	306	328	305	328	0.96
12	16	0.2	16	6.8	0.1	1	23	337	360	337	360	0.94
13	16	0.37	30	5.9	3.6	2	23	367	388	366	389	0.95
14	16	0.049	3.9	8.7	6.5	1	23	743	765	743	765	0.91
15	16	7.5	6e+02	1.8	0.4	2	13	776	785	775	796	0.68
16	16	0.026	2.1	9.5	0.9	1	23	922	944	922	944	0.98

Sequence Information

Coding Sequence: ATGAAGGAGAAAATAAAGAAGAAAGGTGCTAAATCTAAACCTAAACGACAAAAATTTGTTTATACATGTCCACATTGTCATAAGCAATTCGACAACGCCTCCAACTGGCACAGCCATGTCAAACTACATTCAACCGAAGAGCCATACCATTGTGACCTTTGTGACTACAAATGTAAGGTCCAGAAATATCTCACTCGGCACGTAAAGAAGGCCCACACTAAGCCAACCGGCCATCAATGTCCTGTGTGCGGAAAGTGCTTCCATTTTGACTGTAACCTCCGGAATCACATGAGAGTGCATACTGGTGAAAAGCCATTTAAATGCAATGTGTGCGACAAGGCGTTTAATTCTCGGTACTCTTTGAGCGGACACAAGATGATACATACTGGAGAGAAACCATTCCAATGTCAGTACTGTGACTACGCGTGTCGAGACAACTCGACGATAAGACGACATATGGAGAGACATCTCGGATTATCCAAAGACTATCCCTGTTCTATATGTAAAAAGAACTTCAAAAAGAAGGAGACATTACAAATTCACGTGGATGAGGTACATTTTGAGTTGGACACAAGGAAGTATCCGTGTGACCAGTGTGATAAAGTGTTCAAAACTAAAGGGACGCTCAATATACATGCTAACACAGTCCACAATGATTCAAATCGAATCAAATGCGAGATTTGCGGCCGACTGTCTACTAAGAACAATATACAGGCGCATATGAGGCGACATATAGACGTTAAGCCTTACAAGTGCAGCTACAAACCTTGCGGGAAGAGGTTTAAGGATAAGGGTGACCTCAAACGCCACCTCTTAATCCACTACCCAGAAAACCAGCATGTATGTACCGGCTGCAACAGACGCTTCCCTCGCAAGTTCAGACTGGCCAGACATATACGGAATGGATGTCGAGTGCAGTGCCATTATTGCGGACAGTTGTTTACAGCCAAAATCTACCTTGCTCAGCACATAAAAAATGCTCACGGTCCCTACCCCAAATCCAGAGAGTATCTGTGCGACATCTGTGATATGGTCACCTACAGCAGGAGAGGTATCATCCAGCATCTTAAATATGGACATGGCACTGAAAAAGACACAAAATGCCAAATATGTAAAAAGGACTATTTTAAATATCTAACTTTGCAGGAACATTATTTGAGTCATCATAACCTTATATACAGTTTGATGGACAAAAAGAAAAAAGGTAAAATGGCAATAAAAGAGGAGCCTTTGGAAGAAATAGAAGAGATGGGCGAGCCTCCAGATTTTATGTATGAAGTTGACATACAGAAACAGGAAGTAGATGATACCCCACCAGAACCACCACCATTTTCACTCCAGCCCACCAGCCCTGAACACTTCACCATAGACGCAGACACCATCACTTACTCTAAGAAAGTGTTATCAGAAGACATATCCCGCAGTCTGATAGAACGTGATAGTAAGACTGATGTTTTCGACGACTTCTTCATTGGTCATGTGCTGAAGAAGCCTGAGGAAGTACTTGATTTACCAAAACAAATAGTGGATGAGGAGAAGAAAAAGCGCGTTGAGAAGCGTTTAGAGCAGCTTCTAGTGAAGGCGAGAGTACGCAATCAATGGGTGGCTTTGGAGAAATTACGGAGACAATACAACCGACGTATCAAGATGGCGACCAGCGGTGGGGATAAAAAAGAACAAAAATCCATTAGATATTTCAAACAACCAGAAAATAGTAACAAATCTACTAAATCACAAAAAGTTACCAATGATGATAAAGAAACCCATATTGAAGACAATGCTAAAATAAATAATCATGACACTGATGATGTTAACAAACAAGAGATTGATTCAGAAAAAGAAAACTGTAAAAAGATTAATGATAATGATGAAATTGGTGAAGATGGAATAATTGATGACAAAAAACGTGATAACATAATAAATGATGAAGAAAATGCTGACAAAAAACATGATGACATAATAAATGATGAAGAAAATGCTGACAAAAATCGTGATGAAATAATTAATGATGAAGAAAATGCTGACAAAAATCGTGATGAAATAATAAAAGATGAAGAAAATGCTGACAAAAATCATGATGAAATAATAAATAGTGATAAAATTGATGATGATGCAATAAATGATGAAGTTATAGATGATGAAAAGGATCTCGATTATAAAGAGAGTGATTTTGAAAGTAATAGTGATGAAGAAACTAATCCAAATGGAAAACTGAAGTTTAATACGCATCAGTGTTACATATGTTTTAAGCTCTTCAAAACGAAATCAGACTTAAAAATTCACTGCAAAGAACATTTCGATATATGCAACGAAAAAATGCTCAAAAAATGTCCGTTCTGTGGCTATGTTACCAACTTAACAATTACAAGACATATTAAACTTGTTCACAAAATATCTCTTGATATTCCTTACGGGAGGATTAAAGAAAGGGACACAGAGAGCGGATCAAAATATGTCTTCGAAATCGATAAAGATTGTGACTTAGAAGTAATTCCGAGTATAAGCAATCTAAACAAAATCGCATCAATGAAAATCGATGAAAAGAATCGAGAATCGAAAAACATATTCCTGGGAACGACGAAGTTAGTCAAAAAAGGTGGAGATTGGATGGTGGAGAAGCAAAAAGTTGATATCAATACTGAATATCTATTACCAGAGTTTTGTGAGGAAGATTACGCAGCGTTAAAAACTATAGGAGATAACTACTTAGAACAAATTAGAAGTTTGAGTATTCTAGCCAAGAAAAAAGGCCTAAAAATCCTTTATCCCTGTGAAGGATGCGATAAAATCTGCCTAACAATGAGCGCTCTGAAACTACATAACCGAAAACATGAAGCTAACCCAAAGAGATTTAAACCTAAAGTGTGGAAGAATAAGATTTTAATTGGCTTAGGCGGTAGATATAGTCATGTCAACAAAAAAAATAATAGAAAAAAATATGGCAAAAATAATCAAAATAATAATAGTGATGTCACTAATCAGAATAGCGGTAAAAGTAATACAAAAAAAAGCCGTAAGTTAGAAAAAATCGGTAAAAAAGAAAATGTTTCCGAAACAGTAGCGAATCGATTTGCTGATCCGAATCCGGTAAAAAATAATCATAAATGCGATAGAGACCTGATAGAATTTTATCATAAGAACATAAAAGGAGGTGACATAGAGTTTTGGCAATTTTTGAAGATATTCAACAAAATGACCCGCGAAAATGTCAATGATTTTAAAGATTTGGAAAATCGACACGATTTTGGTATGCATAATATCATCAACTATGATGAAATCACAACCGAGAATAATACAGAATCGAATAAAAATGAAATTAGAGATAATAACCAAGTAAAACCTAAAAAAACTGGCAAAATCAAGAAAAAAGCGTTTACTAGAGTGGTTATGATTAGTAAAAAAGAGTATCTAAGAAGGCTCGAGATCAAAAACCAAATGAGGCAAAGGATAGAACGGTCGAAAACTTAA
Protein Sequence: MKEKIKKKGAKSKPKRQKFVYTCPHCHKQFDNASNWHSHVKLHSTEEPYHCDLCDYKCKVQKYLTRHVKKAHTKPTGHQCPVCGKCFHFDCNLRNHMRVHTGEKPFKCNVCDKAFNSRYSLSGHKMIHTGEKPFQCQYCDYACRDNSTIRRHMERHLGLSKDYPCSICKKNFKKKETLQIHVDEVHFELDTRKYPCDQCDKVFKTKGTLNIHANTVHNDSNRIKCEICGRLSTKNNIQAHMRRHIDVKPYKCSYKPCGKRFKDKGDLKRHLLIHYPENQHVCTGCNRRFPRKFRLARHIRNGCRVQCHYCGQLFTAKIYLAQHIKNAHGPYPKSREYLCDICDMVTYSRRGIIQHLKYGHGTEKDTKCQICKKDYFKYLTLQEHYLSHHNLIYSLMDKKKKGKMAIKEEPLEEIEEMGEPPDFMYEVDIQKQEVDDTPPEPPPFSLQPTSPEHFTIDADTITYSKKVLSEDISRSLIERDSKTDVFDDFFIGHVLKKPEEVLDLPKQIVDEEKKKRVEKRLEQLLVKARVRNQWVALEKLRRQYNRRIKMATSGGDKKEQKSIRYFKQPENSNKSTKSQKVTNDDKETHIEDNAKINNHDTDDVNKQEIDSEKENCKKINDNDEIGEDGIIDDKKRDNIINDEENADKKHDDIINDEENADKNRDEIINDEENADKNRDEIIKDEENADKNHDEIINSDKIDDDAINDEVIDDEKDLDYKESDFESNSDEETNPNGKLKFNTHQCYICFKLFKTKSDLKIHCKEHFDICNEKMLKKCPFCGYVTNLTITRHIKLVHKISLDIPYGRIKERDTESGSKYVFEIDKDCDLEVIPSISNLNKIASMKIDEKNRESKNIFLGTTKLVKKGGDWMVEKQKVDINTEYLLPEFCEEDYAALKTIGDNYLEQIRSLSILAKKKGLKILYPCEGCDKICLTMSALKLHNRKHEANPKRFKPKVWKNKILIGLGGRYSHVNKKNNRKKYGKNNQNNNSDVTNQNSGKSNTKKSRKLEKIGKKENVSETVANRFADPNPVKNNHKCDRDLIEFYHKNIKGGDIEFWQFLKIFNKMTRENVNDFKDLENRHDFGMHNIINYDEITTENNTESNKNEIRDNNQVKPKKTGKIKKKAFTRVVMISKKEYLRRLEIKNQMRQRIERSKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908163; iTF_00238023; iTF_00173544; iTF_00039177; iTF_00623406; iTF_01526455; iTF_01440344;
90% Identity: -
80% Identity: -