Taur020702.1
Basic Information
- Insect
- Tiliacea aurago
- Gene Symbol
- Znf784
- Assembly
- GCA_948098905.1
- Location
- OX402584.1:4701506-4706109[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2e-05 0.0017 19.4 2.6 1 23 42 64 42 64 0.96 2 14 0.00064 0.054 14.6 2.5 1 23 85 107 85 107 0.96 3 14 0.0099 0.83 10.9 0.0 1 23 130 152 130 152 0.93 4 14 0.57 48 5.3 0.6 5 23 160 179 157 179 0.93 5 14 3.6e-06 0.0003 21.7 2.5 1 23 271 293 271 293 0.99 6 14 1.5e-06 0.00013 22.9 2.0 1 23 299 321 299 321 0.98 7 14 0.0026 0.22 12.7 1.1 1 23 328 350 328 350 0.93 8 14 5.3e-06 0.00045 21.2 5.6 1 23 356 378 356 378 0.98 9 14 2.7e-05 0.0023 18.9 1.8 1 23 384 406 384 406 0.98 10 14 1.5e-06 0.00012 22.9 1.5 1 23 412 434 412 434 0.98 11 14 1.2e-06 9.8e-05 23.2 1.7 1 23 440 462 440 462 0.97 12 14 8.8e-05 0.0074 17.3 1.5 1 23 469 492 469 492 0.95 13 14 8.7e-05 0.0073 17.3 5.7 1 23 502 525 502 525 0.97 14 14 0.25 21 6.5 0.5 2 20 529 547 528 549 0.91
Sequence Information
- Coding Sequence
- ATGACAGCCGTCAGCTGTCAACCATTCGGAGCGCTCGTGAATCCGCTCACGGTTGTGGATTACAGGGATTTTGCTATTGTCTTGGGACCAGAATTGCTGGTAAAGCTGGAAAAGCTGAATGTACACAAATGTGAGAAATGCCCAAAAGTCTTCCCAAATACGAGTGACCTCATGAAACATAAGTCATATCATGATGAATACTTCTTCTCACATCTTGTTAGTGCATATGTATATATAGAAAGGGCCAAAATATTCAAATGTGACAAATGCACTAAAAGATTTGATAATAACAGAGATTTTATGCTTCATAAGCTTGCGCACATACAGGAGAATGTGAGAAAAGAAAGAAAAAACAACAAATTTCAGAACCATGATATTGTGAAACCCTACAATTGTCCAGATTGCGATGTTAGTTATGCTGCACAAAGTACTCTTGATGAACATTCTATTCTTCACTTGCCATTCCCTCACATCTGTGAGTGTGGCATTGGGTATTATATGAAACAGGATTTGAAATCCCACACCAAATTGGTACATGGAACGAAAACTAAACTAGACCCGACTTTGTCGCAAAATTTAGATGCACAAGAACAAGTTATATCACAAACAAAGCCTCAAGATAAACCCCAAAGAAACCATAAATCTAAAACCAAGAAGGGGTCAACAATAAAACAAACTATAAAGAAGGAAAATCCTAAAAAGAAGTGTAAAGTTACACTGAAAGGTGAAGATACTAACAGCAATAAACAAAAAACAAAATGGAATGTGCAAATCCCAGATATAGATTTCAGAAAGACCTCCAATAATCAGTATGAATGTCCTGTATGTAAGAAATTGTTTAGATACAAAGATCATCTTATTACACACTACCGCATTCACACTGGTGAACGCCCATACACTTGCCATTTATGTCCGAAGGCGTTTAGCCAGAGAATCACACTAACAAAACATATAGAGAGGCACATGGCGACAGAGAGGATCTATGTATGCAAACATTGCCCTAAAGCTTTCACCCTGCCGTACTATAGGGATCGTCATGAAGATATACACAGTGTGGTTAAAGCTCACGAGTGTCCGTACTGCCACAAAGGATTCCACGATCAGTCCGCATTGATACGCCACAAACGGACACACACGGGAGACAAACGATACAGCTGCTCTTACTGCCCTAAAACATTCTGTGACGTTAGTGGCCTCAGTGCACATAAATTACGTCATGAGAAAAAGAAAGAGTTTCAGTGTGAAATTTGCTATATGCGATTTTATAATCGAAGTGATCTTAAGAAACACATGTTGGTACACACTCATGAACGAAACTTTGCTTGTGACTATTGTAAAAAACGTTTCAGTTCTAAAGGTAATCTAATGACGCATGTACAGAGGCATATGATTTTAAAGAAACATTTCGTATGTGAGGAATGTAACAGGAAATTTCTCACAAAGGATTATCTAAGAAGACATATAAAGGACACACATCAAAAAACATTCAGACGCTTACATAAATTTAAATGTAATGATTGCCCGAAACAGTTCCACCATAGAGAAAATTTACGGAGTCACTATCTGAGTTCCCATTCAAATATTCGTTGTGATAACTGCTCTCGGTATTTTGTAAGTACAACCCATTTCGAAGGACACAAGCTGATTGAGAGTGTACAATGTGAAATATGTGACGTGAAATTATATTGTGAAAATATGCAGGCGAAGCATTTTAAAGTTCATTATCCCCAAAGTGTGAAAGAGATTAAAAGTGACACAAATAGCCTGAAAGAAATTTAG
- Protein Sequence
- MTAVSCQPFGALVNPLTVVDYRDFAIVLGPELLVKLEKLNVHKCEKCPKVFPNTSDLMKHKSYHDEYFFSHLVSAYVYIERAKIFKCDKCTKRFDNNRDFMLHKLAHIQENVRKERKNNKFQNHDIVKPYNCPDCDVSYAAQSTLDEHSILHLPFPHICECGIGYYMKQDLKSHTKLVHGTKTKLDPTLSQNLDAQEQVISQTKPQDKPQRNHKSKTKKGSTIKQTIKKENPKKKCKVTLKGEDTNSNKQKTKWNVQIPDIDFRKTSNNQYECPVCKKLFRYKDHLITHYRIHTGERPYTCHLCPKAFSQRITLTKHIERHMATERIYVCKHCPKAFTLPYYRDRHEDIHSVVKAHECPYCHKGFHDQSALIRHKRTHTGDKRYSCSYCPKTFCDVSGLSAHKLRHEKKKEFQCEICYMRFYNRSDLKKHMLVHTHERNFACDYCKKRFSSKGNLMTHVQRHMILKKHFVCEECNRKFLTKDYLRRHIKDTHQKTFRRLHKFKCNDCPKQFHHRENLRSHYLSSHSNIRCDNCSRYFVSTTHFEGHKLIESVQCEICDVKLYCENMQAKHFKVHYPQSVKEIKSDTNSLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00173458;
- 90% Identity
- -
- 80% Identity
- -