Taur005982.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiliacea aurago
Gene Symbol
-
Assembly
GCA_948098905.1
Location
OX402589.1:2406273-2409936[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-07 0.00011 22.4 0.0 5 42 22 59 20 61 0.91

Sequence Information

Coding Sequence
ATGCCTAGAAACTACCGACCCAAACCGGGAGCGAAATCTCTTAAAAAATATGACGTAGCCATAATTAATCAAGCTTTACTAGACATATCAGCTGGAAACACATCGATACGATGCATTGCTGAGAAATATGGAATTTCATATTCAGTTTTACAGAGACGCAATAATAAATCAATGAAACTCCATGGTGGCCAAACGGCAATGACACCAGAGGCCGAGGCTTTTATTGTAAAAAATTTAAATATTTGTGCGGATTGGGGCTATCCGTTGGACCAAAACGATTTAAGATATATTGTTAAAATGTATCTTGATACATCAAACATTACTGTGAAAAGGTTTAAAAACAACTATCCAGGGCCTGATTTTGTTGAGAGCTTCCTGAAACGACATAGTGACAAAATATCAAAGCGGATATCTCAAAACATCAAACGTTCGAGAGCAGAAGTGTCACCTGAAATGATGAAAACCTACTTTGCAGAACTAGAAAAGTCACTTGAAGGCGTACCTCACTCTAACATAGTCAACTACGACGAAACAAACTTATCAGATGACCCTGGGCGACCAAAAGTCATCGTTCGGCGCGGATGTAAATATCCAGAAAGGGTCCGGAATTTTTCAAAAGGGTGTACGTCTTTGATGATTGCAGCAAACGCTGAAGGAGAACTATTGGTGCCTTATGTAGTGTATAAGTCAACCTACCTTTACGATACTTGGATACAAAATGGCCCAAAAGGAACCTGCTATAACAGGTCGAAATCTGGCTGGTTTGATGGAGAAATCTTTAGTGATTGGATCACAAATGTCATTATTCCATATTTTGACAAAAAAACCGGTAAAAAACTTCTTATAGGTGACAACTTATCGTCTCATCTTTCAGTGCATTTAATAGATCTGTGTAAAGAAAAGGACATACACTTTGTGTTTTTGCCACCAAACTCCACTCATTTGACCCAACCACTAGACGTGGCCTTTTTCCGTCCTATGAAACAAGCATGGCGGAGTATTTTGCAGAAGTGGAAAGAAACTGATGGACGGAATTTAAGCTCCATTCCAAAGGGATGTTTTCCTCGCCTTTTGAAGCTATTGATCAATCAGCTTAATATTAACGCCAAATCCAATATACTTTCTGGATTTAAAAAAACTGGTATTGTTCCTTTAAACAGTGAAGAAGTCATATCTCGCCTTCCAAATGCCGAAATAGATGAGACTGCCCAAGATGCTGTGAACGAGTCATTTGTGAAGTATCTAAAAGAAATGCGTTATGGAACTTTGGATATTACTGAACCAAAGAAGAAAAAGAAATTAAATGTTGTAGCTGGTAGAAGTGTGTGTCCGGATGAATTAAATAATGAAAATAGACCCAAAGAAGATGAGCAACAAACTACAAGCAATATTGTATCAATGCAGAAAAAAAAAGGATTAGGAAAAAAATCCAAACCACAATCTTCAAACAGTCGCTTTATTGAAAAATTGATTCCTTTGTCCCTAAATACACAAATACCTCTGAATCCATCAATCAGTAGTGCAAGCACTTCCACTATGAATGCGATTCTTGACATGGATATAGAATCGATGCCTATTGTTTTAGAGGATGATCTATTTGTTGAAAGAGAAGAAATTTTGATAGAACAGACAGAAACAGAACAAGACACAAATGTTGACGAAGATGGCAGTATTCAACAAGTAAACAAGAAAGAGGCTATAAAGGAGTGTAAGGTCAAAATATTATCTGACGAAATAGTTACATGGAATCGTATTCTTACAAAGAAAAAGAAGACAGAAGATAAAAATATGGTGTGCACAATAAAAAAACCCAAACTGTTATGTACTCCAAATGCAGCTCCGATCCCAAGCCGAAGAGTCAGCCCTGCTCCACTCCTCACGCCGTGGTACTCGAACTTCGCCCTGTGCCTCCTTTTGGCCTGGTACTCCAATAACGCCCTGCGCTACCTGGTACTGGTCCTCGCCCTGCGCCAACCTGATGCTGCTCCACGCCAACTTCACTGCTGCAGCACTCACTCACTGTGCACACCAGCTTGGGTATGCGGCGCTTCAGGGCGATCCACCCTGGTTTCCACGCCAAGTATCACAGAACACTATCTGGATCTCACTATCGCGGCTCGATGGACCAACATGTTGGGCACTATACAACTCCCGGGGAAGTGA
Protein Sequence
MPRNYRPKPGAKSLKKYDVAIINQALLDISAGNTSIRCIAEKYGISYSVLQRRNNKSMKLHGGQTAMTPEAEAFIVKNLNICADWGYPLDQNDLRYIVKMYLDTSNITVKRFKNNYPGPDFVESFLKRHSDKISKRISQNIKRSRAEVSPEMMKTYFAELEKSLEGVPHSNIVNYDETNLSDDPGRPKVIVRRGCKYPERVRNFSKGCTSLMIAANAEGELLVPYVVYKSTYLYDTWIQNGPKGTCYNRSKSGWFDGEIFSDWITNVIIPYFDKKTGKKLLIGDNLSSHLSVHLIDLCKEKDIHFVFLPPNSTHLTQPLDVAFFRPMKQAWRSILQKWKETDGRNLSSIPKGCFPRLLKLLINQLNINAKSNILSGFKKTGIVPLNSEEVISRLPNAEIDETAQDAVNESFVKYLKEMRYGTLDITEPKKKKKLNVVAGRSVCPDELNNENRPKEDEQQTTSNIVSMQKKKGLGKKSKPQSSNSRFIEKLIPLSLNTQIPLNPSISSASTSTMNAILDMDIESMPIVLEDDLFVEREEILIEQTETEQDTNVDEDGSIQQVNKKEAIKECKVKILSDEIVTWNRILTKKKKTEDKNMVCTIKKPKLLCTPNAAPIPSRRVSPAPLLTPWYSNFALCLLLAWYSNNALRYLVLVLALRQPDAAPRQLHCCSTHSLCTPAWVCGASGRSTLVSTPSITEHYLDLTIAARWTNMLGTIQLPGK