Basic Information

Insect: Thymelicus lineola
Gene Symbol: stc
Assembly: GCA_963932265.1
Location: OZ010691.1:3542450-3555464[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 3.5e+04 -4.3 1.6 15 19 497 501 496 501 0.81

2 15 0.04 7e+02 1.3 1.2 2 10 529 537 529 537 0.93

3 15 3.8e-05 0.66 11.0 18.1 4 19 545 560 543 560 0.93

4 15 0.046 8.1e+02 1.1 0.7 6 12 586 592 585 592 0.91

5 15 3.2e-08 0.00057 20.8 15.3 1 19 596 614 596 614 0.97

6 15 0.96 1.7e+04 -3.1 0.3 8 11 619 622 618 622 0.86

7 15 0.0011 19 6.3 12.0 1 19 653 671 653 671 0.98

8 15 6.4e-07 0.011 16.6 11.9 1 19 712 734 712 734 0.89

9 15 0.76 1.3e+04 -2.8 2.3 5 10 763 768 763 768 0.95

10 15 0.0001 1.8 9.6 8.0 1 13 774 786 774 786 0.98

11 15 0.18 3.2e+03 -0.8 0.5 2 10 787 795 787 797 0.94

12 15 2.3e-06 0.041 14.9 15.1 1 19 801 819 795 819 0.88

13 15 0.058 1e+03 0.8 17.3 1 18 858 874 858 875 0.81

14 15 1.1e-07 0.002 19.0 15.1 1 17 911 929 911 935 0.83

15 15 0.018 3.1e+02 2.4 12.7 1 18 941 963 941 964 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	3.5e+04	-4.3	1.6	15	19	497	501	496	501	0.81
2	15	0.04	7e+02	1.3	1.2	2	10	529	537	529	537	0.93
3	15	3.8e-05	0.66	11.0	18.1	4	19	545	560	543	560	0.93
4	15	0.046	8.1e+02	1.1	0.7	6	12	586	592	585	592	0.91
5	15	3.2e-08	0.00057	20.8	15.3	1	19	596	614	596	614	0.97
6	15	0.96	1.7e+04	-3.1	0.3	8	11	619	622	618	622	0.86
7	15	0.0011	19	6.3	12.0	1	19	653	671	653	671	0.98
8	15	6.4e-07	0.011	16.6	11.9	1	19	712	734	712	734	0.89
9	15	0.76	1.3e+04	-2.8	2.3	5	10	763	768	763	768	0.95
10	15	0.0001	1.8	9.6	8.0	1	13	774	786	774	786	0.98
11	15	0.18	3.2e+03	-0.8	0.5	2	10	787	795	787	797	0.94
12	15	2.3e-06	0.041	14.9	15.1	1	19	801	819	795	819	0.88
13	15	0.058	1e+03	0.8	17.3	1	18	858	874	858	875	0.81
14	15	1.1e-07	0.002	19.0	15.1	1	17	911	929	911	935	0.83
15	15	0.018	3.1e+02	2.4	12.7	1	18	941	963	941	964	0.74

Sequence Information

Coding Sequence: ATGTCCCAGTGGAACAATTCGTACGCTTATAACAACCAGTATCAGGGCCATAATACCTGGAATGGCGACATGAATGGTCAATACCAAGCTTATTATCCTAATAGACAATTTGATAACAGTAACCAGTATGTGAGCTTCAATGAGTTTCTTGCTCAAATGCAGTCTGCTGGCGTCCCCGCGGCGAACCCTGTGGCGTACAACAACATCCAGTATACAAACTATCCAAATAATCAATATAGTTATCAAAATATTCCATCACAAGGTGCTCAAATTGATCACAGTTATGGGGCAAATGCAACAAACAACATTGCACCTTTGAATAATGCTGAGCCAACCCCAGTGTACCAGTTGGAGACGCAACATCAAAAGCAATATGACTCCGCTCTAGCAGAATCAAAGAAATATAATCAAATGGTTTTCAACTCAAAACTCACTCCAACAGCAACTGAATTTGTGCCTAAAAGATCTGGTATTGATACAACAAGCAATTCTAGTAGTATACCACAACTAAACCAACCATCAACTAGCAAAATTgtaaatgaaaatgtaaatataagCAATTCCAGTAGCCAAAATAAGCCTTCTAGTTCTAAAACAAATTGGAGAGAAAGACCTCAAACTTCTCAGCAGAACGACAGTAATGTTGAAGAAACTGTTGATAGACAGAATAAGAATTATAGAGGACAGAATAGAAATGGTTCTGTACAAGAAAAGTACAACCAGAACAATGATTCTAATAACCATAGTCAAGATTCTTCTTACCGCAACCAAGAGTCTAGTAAAAGCAACTATGTTGCTAATGGCCATAATAATGATGGGAATGGATCTAGATATGTGACAGATACCAACAGTGATAATTCTGAGACAAGTACTCGTCAGCAGGAGAGAAGCAGAAGGAATAATGAATCAAACAGTTACCAGAGGTCTAACAATCGGTATTATGAGAATAACAACCAAAATAGAGAACATAGCAGGAACACAGACAGCTATCGAGGAGAAGAGGGTCAATCGAGGTACAActccaaacataataataaaaataaggatTCAGACAGAATGTTTTACAATAGTTCAGTACCTAAGGGGAGTCAGGATGTGAGGAACGGGAGAGGCGATGGTTCCGGACGCCGTGGATGGGCTGGGAGTCAGCGTGTGAGAACAAATGAACGTAACTTTGATGAGGATGAGCAGTATGCTAATACATATCTTCAGCATAGGGAAGATAAGCTGAATAAAGAACCCAAAGCGAGTCCcgtaagaaacaaaaataataaaaatgggaCCAGTAGTGcagTAGCAAACACAGAAATGACTCAGCGAGAACGACTCAGCAAGCAGTTAGATAAGGGCACACTGGAGTGCCTGGTGTGCTGTGAACGAGTTAAGCAGATAGACACAGTCTGGTGGTGCTCCAATTGCTACCATGTTTTGCATCTTAAGTGCATCAGGAAATGGGCATTGAGTAGTGTGATTGAGGGCAAATGGCGTTGTCCGGCATGCCAGAACCCATCCAACGAGATCCCGACGGAGTACCGGTGCATGTGCGGCGCGGTACGCAACCCGGAGTACcagcgcggcgcgggcggcgctcACACCTGCGGGCGCGCCTGCCAGCGGCCGCGCGCCTGCCCGCACCCCTGCACGCTGCTCTGCCACCCGGGACCGTGTCCGCCGTGCCAGGCTACTGTTAACAAACATTGCGGTTGTGGAACAGAGACCCGATCCATCTTGTGTAGCAGCAAGCTGCCGCAGGTGTGTGGCCGAGTGTGCCACAAGACTCTCGACTGTGGCTCACACACGTGCCAGAAGGAGTGCCATGAGGGACCCTGTGAAGACTGCAAGGAGACTGTTACACAGGTGTGCCACTGCGCGGTGGGCAAGTCGCGCGTGGTGGCGTGCGAgcgcggcgtgacgtcacagtGGGCGTGCGGCGCGGAGTGCGGCCGCGTGCTGGCGTGCGGCGCGCACGTGTGTCGCCGCGAGTGCCACGCGCCGCCGTGCAGTGCGTGCCCGCTGCGGCCGGAGAGCGTGCCCACTTGCCCGTGTGGGAAGACCAGGATCCAGGAAGGTCAGCGCAAATCGTGCACTGATCCAATACCGCTTTGCGACAACATCTGCGCCAAGCCGCTGCGTTGCGGACCTGACGAAGAGAGGCACTTCTGCAAGGAGAAGTGCCATGAAGGCGAATGTCCAGTGTGCCCCGACTCGACCCACCTGCAGTGTCGGTGCGGACATTCGACGCGCGAGGTGCCGTGCCGGGACCTGCCCGAGCAGCGGAACAGTGTCACCTGCCAACGGAAGTGCAATAAGAAGCTGAGTTGCGGGCGTCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACCTGTGCACGCTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCAGCACCGCTGCGAGGAGTACTGCCACGCCGGACACTGCGCGCCCTGCCCCCGTCTCAACTTCGAGGAGGTCCGCTGCGAGTGCGGTGCGGCCGTCCTGCTGCCGCCGGTGCGGTGCGGCGCGCGGCCGCCCGCGTGCGAGGCGGAGTGCGGGCGCGTGCGACCGTGCGGACACCCGCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCGCGCGCGTCTGCTACGGGGGACATGAGgaAAGAAAAACTATTCCGTGTTCGCAAGAGGAGTTCTCGTGCGGGCTGCCGTGCGGCAAGCCGCTGCCGTGCGGCAAGCACACCTGCATCAAGATCTGCCACAAGGGGCCCTGCGACACCGGCAAATGCGTGCAGCCGTGCACGGAGAAGCGGCCGTCGTGCGGTCACCCGTGCGCGGCGGCGTGCCACGCGGGCGGGGGCGGGGCGTGCCCCAGCTCCGCCCCCTGCCGGCGCACCGTGCGCGCCACGTGCCCGTGCGGCCGGCGCACAGCCGAGCGCTCCTGCTGCGACAACGCACGAGACCTCGCACGCATCATGAGTCAGCTCGCTGTGTCGAAGATGCAGGAGGGCGGGTCGGTGGATCTGAGCGACGTGCAGCGGCCGGTTAATATGCTCAAAACGCTGGAGTGCGACGACGAGTGTCGGCAGGAGGCGCGCAGCCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCGGCGAAGCTCGCGCCGCGCTACAGCGAGCACGTGCGCTCCACGGCCGCGCGCGAGCCCGCGTTCGCGCACCACGTGCACGACCGACTCGCCGAGCTCGTGCAGAGGGCTAAGAACTCGAAGCAGAAGACGCGGTCGCACTCGTTCCCGTCGATGAACCGTCAGAAGCGGCAGTTCATCCACGAGATGTGCGAGCACTTCGGTTGCGAGAGCGTCGCGTACGACGCCGAGCCCAACCGGAACGTGGTCGCCACTGCCGACAGGGAGAAGTCGTGGCTGCCGGCGATGAGCGTGATGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGCCGCGTGCCGGGGCCCGTGCtgcgcgcgccgcccgccggCAACACCGCCGCCGCCAAACCAACAAGCGGTTGGGCCACACTGACATCTACAAACGCGTGGGCGGCACGCAGCGCTCGCTCCGCCCCCCAACAACAACCTCAACAACAACAGcagcaacaacaacaaacacaaCAACAGCCACCACAACAACAGCAGTCCGCAGCTCCTAAAATCGACTATTTTGACAACCCACCCGACAATTAG
Protein Sequence: MSQWNNSYAYNNQYQGHNTWNGDMNGQYQAYYPNRQFDNSNQYVSFNEFLAQMQSAGVPAANPVAYNNIQYTNYPNNQYSYQNIPSQGAQIDHSYGANATNNIAPLNNAEPTPVYQLETQHQKQYDSALAESKKYNQMVFNSKLTPTATEFVPKRSGIDTTSNSSSIPQLNQPSTSKIVNENVNISNSSSQNKPSSSKTNWRERPQTSQQNDSNVEETVDRQNKNYRGQNRNGSVQEKYNQNNDSNNHSQDSSYRNQESSKSNYVANGHNNDGNGSRYVTDTNSDNSETSTRQQERSRRNNESNSYQRSNNRYYENNNQNREHSRNTDSYRGEEGQSRYNSKHNNKNKDSDRMFYNSSVPKGSQDVRNGRGDGSGRRGWAGSQRVRTNERNFDEDEQYANTYLQHREDKLNKEPKASPVRNKNNKNGTSSAVANTEMTQRERLSKQLDKGTLECLVCCERVKQIDTVWWCSNCYHVLHLKCIRKWALSSVIEGKWRCPACQNPSNEIPTEYRCMCGAVRNPEYQRGAGGAHTCGRACQRPRACPHPCTLLCHPGPCPPCQATVNKHCGCGTETRSILCSSKLPQVCGRVCHKTLDCGSHTCQKECHEGPCEDCKETVTQVCHCAVGKSRVVACERGVTSQWACGAECGRVLACGAHVCRRECHAPPCSACPLRPESVPTCPCGKTRIQEGQRKSCTDPIPLCDNICAKPLRCGPDEERHFCKEKCHEGECPVCPDSTHLQCRCGHSTREVPCRDLPEQRNSVTCQRKCNKKLSCGRHRCREVCCAGGEHLCTLVCGRSLFCQQHRCEEYCHAGHCAPCPRLNFEEVRCECGAAVLLPPVRCGARPPACEAECGRVRPCGHPPHHSCHTGDCPPCVVLTARVCYGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGPCDTGKCVQPCTEKRPSCGHPCAAACHAGGGGACPSSAPCRRTVRATCPCGRRTAERSCCDNARDLARIMSQLAVSKMQEGGSVDLSDVQRPVNMLKTLECDDECRQEARSRQLALALQIRNPDVSAKLAPRYSEHVRSTAAREPAFAHHVHDRLAELVQRAKNSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVMEVLAREAGKRRVPGPVLRAPPAGNTAAAKPTSGWATLTSTNAWAARSARSAPQQQPQQQQQQQQQTQQQPPQQQQSAAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01082982; iTF_00796164; iTF_01438575;
90% Identity: iTF_01438575;
80% Identity: -