Basic Information

Insect: Ochlodes sylvanus
Gene Symbol: stc
Assembly: GCA_905404295.1
Location: FR990134.1:10981809-10991829[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 2.6e+04 -4.3 1.6 15 19 498 502 497 502 0.81

2 16 0.04 5.2e+02 1.3 1.2 2 10 530 538 530 538 0.93

3 16 3.7e-05 0.49 11.0 18.1 4 19 546 561 544 561 0.93

4 16 0.046 6e+02 1.1 0.7 6 12 587 593 586 593 0.91

5 16 1e-08 0.00014 22.3 14.6 1 19 597 615 597 615 0.97

6 16 0.96 1.2e+04 -3.1 0.3 8 11 620 623 619 623 0.86

7 16 0.0011 14 6.3 12.0 1 19 654 672 654 672 0.98

8 16 6.4e-07 0.0084 16.6 11.9 1 19 713 735 713 735 0.89

9 16 0.76 9.9e+03 -2.8 2.3 5 10 764 769 764 769 0.95

10 16 0.0001 1.4 9.6 8.0 1 13 775 787 775 787 0.98

11 16 0.15 1.9e+03 -0.5 0.6 2 10 788 796 788 798 0.94

12 16 2.8e-06 0.036 14.6 15.3 1 19 802 820 796 820 0.88

13 16 0.061 7.9e+02 0.7 16.7 1 18 859 875 859 876 0.81

14 16 0.24 3.1e+03 -1.2 1.0 8 13 881 886 880 887 0.85

15 16 3.8e-08 0.0005 20.5 14.0 1 17 912 930 912 936 0.83

16 16 0.00042 5.4 7.7 11.0 1 19 942 959 942 965 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	2.6e+04	-4.3	1.6	15	19	498	502	497	502	0.81
2	16	0.04	5.2e+02	1.3	1.2	2	10	530	538	530	538	0.93
3	16	3.7e-05	0.49	11.0	18.1	4	19	546	561	544	561	0.93
4	16	0.046	6e+02	1.1	0.7	6	12	587	593	586	593	0.91
5	16	1e-08	0.00014	22.3	14.6	1	19	597	615	597	615	0.97
6	16	0.96	1.2e+04	-3.1	0.3	8	11	620	623	619	623	0.86
7	16	0.0011	14	6.3	12.0	1	19	654	672	654	672	0.98
8	16	6.4e-07	0.0084	16.6	11.9	1	19	713	735	713	735	0.89
9	16	0.76	9.9e+03	-2.8	2.3	5	10	764	769	764	769	0.95
10	16	0.0001	1.4	9.6	8.0	1	13	775	787	775	787	0.98
11	16	0.15	1.9e+03	-0.5	0.6	2	10	788	796	788	798	0.94
12	16	2.8e-06	0.036	14.6	15.3	1	19	802	820	796	820	0.88
13	16	0.061	7.9e+02	0.7	16.7	1	18	859	875	859	876	0.81
14	16	0.24	3.1e+03	-1.2	1.0	8	13	881	886	880	887	0.85
15	16	3.8e-08	0.0005	20.5	14.0	1	17	912	930	912	936	0.83
16	16	0.00042	5.4	7.7	11.0	1	19	942	959	942	965	0.73

Sequence Information

Coding Sequence: ATGTCCCAGTGGAACAATTCGTACGCTTATAACAACCAGTATCAAGGCCATAGTACCTGGAATGGAGACATGAATGGCCAATACCAAGCTTATTATCCTAATAATAGACAATTTGATACCAGTAATCAGTATGTGAGCTTCAATGAGTTCCTTGCTCAAATGCAGTCTGCTGGTGGCCACGCGGCGAACCCTGTCGCGTACAATAACATCCAGTACCCAAACTTTCCTAATAACCAATATAGTTATCAAAATATTCCTGCACAAAGTGCTCAGATGGATCACAGTTACGGGGGAAATGCAGCAAGTAATATTGTGCCACTAAATACTGCTGAACAGCCACAAGTGTACCAAACGGATGCTCATCATCATAAACAATATGATCCAGCTTTAGCCGAAACAAATAAATACAATGAAATGGTGTTCAATTCAAAACTAACTCCAACGGCGACAGAATTTGTGCCTAAAAGTTCAGGTGTTGATGCTGCTAGCAATTCCAATAGTATATCACACCTGAACAAACCTTCAACTAGCAAAATTTTTAATGAAACTGTAAATATAAGCAATTCCAGTAGCCAAAACAAGCCTACTAGGGAAACAAATTGGAGAGAAAGACCTCAAACTTCGAATGGAGGTTCTAATGCTGAAGAAATTGTGGATAGACAGAATAAGTATTACAAACAGAATAGAAACGGGTCTGCAAACAATTATGAGAAGTACAACCAGAACAATGATTCTAATAACCATACACAAGATTCCTATTACCGCAACCAAGAATCTAGCAAAGCCAATCATGTTGCTAACGGCCATAATCAAGATGGAAATAGCTCTAGGTACGTGCCTGATAACAATGATGATAATGTTGACACAAGTACTCGCCACCAGGAGCGGAGCAAGAGAAACAATGAGTCGAACAGTTACCAGAAGTCCAATAATCGTTATTACGATTCCAACAACCACAGCCGAGAACAGAGCAGGAATAACGATAGCTACAGAGGGGAAGAGAGTCAGTCGAGACCCAGCTCTAAACATAATAACAAAAATAAGGAAACAGATGCTGGTCGAATGTTTTACAACAGTTCTATACCTAAGGGGAGTCAGGATGTGAGGAATGGTAGGGGCGATGGATCTGGACGCAGAGGGTGGGCTGGGAGTCAGCGAGTGAGAACTAACGAACGTAACATCTTCGAGGATGAACAGTATGCTAATACATATCTCCAGCATAGGGAAGATAAGCTGAATAAAGAAACCAAACCCAGTCCCTCAAGAAATAGAAATAATAAAAATGGGACCAATAGTGGAGCTAATGTAGAAATGACTCAGCGGGAACGTCTCAGCGAGCAATTAGACAAAGGGACATTAGAGTGCCTGGTGTGCTGTGAACGTGTCAAGCAGACGGACTCAGTGTGGTGGTGCTCCAATTGCTACCACGTTTTGCATCTCAAATGTATAAGGAAATGGGCATTAAGTAGTGTGATCGAGGGTAAATGGCGTTGTCCCGCGTGCCAGAACGCATCAAACGAGATCCCGACCGAGTACCGCTGCATGTGCGGCGCGGTCCGCAACCCGGAGTACCAGCGCGGCGCGGGCGGCGCGCACACGTGCGGGCGCGCCTGCCAGCGGCCGCGCTCGTGCCCGCACCCGTGCACCCTGCTCTGCCACCCGGGGCCCTGCCCGCCGTGCCAGGCTACTGTTAACAAACACTGCGGTTGCGGCACGGAGACCCGATCAATCTTATGCAGCAGCAAGCTGCCTCAGGTGTGCGGGCGGGTGTGCCATAAGACACTCGACTGCGGCGTGCACACTTGCCAAAAGGAGTGCCACGAGGGACCCTGTGATGAGTGCAAAGAGACTGTTACCCAGGTGTGCCACTGCGCGGTGTCCAAGTCCCGCGTGGTGGCGTGCGAGCGCGGCGCGACGGCGCAGTGGGCGTGCGGCGCGGAGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGGCGCGAGTGCCACGCGCCGCCGTGCAGCGCGTGCCCGCTGCGCCCGGACAACGTGTCCGCGTGCCCCTGCGGGAAGACCGGGATACAGATGGGCCAGCGCAAGTCGTGCACCGACCCCATACCGCTGTGCGACAACATCTGCGCGAAGCCGCTGCGCTGCGGGCCCGACGAGGAAAGACACTTTTGTAAGGAGAAGTGTCATGAAGGTGAATGCCCGGTGTGCCCCGACTCGACCCACCTGCAGTGTCGGTGCGGACACTCGACGCGCGAGGTGCCCTGCCGCGACCTGCCCGACCTGCGGAACAGCGTCACCTGCCAACGGAAGTGCAATAAGAAGCTGAGCTGTGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACCTGTGCACGGTGGTGTGCGGCCGCAGTCTGTTTTGCCAGCAGCACCGCTGCGAGGAGTACTGCCACGCGGGACACTGTGCGCCATGCCCGAGGCTCAACTTCGAGGAGGTCCGTTGCGAGTGCGGCTCGTCGGTGCTGCTCCCGCCGGTGCGGTGCGGCGCGCGGCCGCCGGCGTGCGACGCGGCGTGCGCGCGCGCGCGGCCGTGCGGCCACCCGCCGCACCACTCGTGCCACGTGGGCGACTGCCCGCCGTGCGTGGTGCTCACCGCGCGCGTCTGCCACGGGGGGCACGAGGAAAGAAAAACCATTCCGTGTTCGCAAGAAGAGTTCTCGTGCGGCCTCCCGTGCGGCAAGCCGCTGCCGTGCGGTAAGCACACGTGCATCAAGACCTGCCACAAGGGGCCCTGTGACACTGGCAAATGCACGCAACCGTGCACGGAGAAGCGTCCGTCGTGCGGGCACGCGTGCGCGGCGCCGTGCCACGCGGGCGCGGGCGGCGCGTGCCCCAGCGCGGCGCCGTGCCGCCGCTCCGTGCGCGCCACGTGCCCCTGCGGCCGGCGCTCCGCCGAGCGGGCGTGCTGCGACAACGCGCGCGACCTTGCCAGAATAATGAGCCAACTGGCTGTGTCCAAGATGCAGGAGGGCGGTTCGGTCGACTTGAGCGACGTGCAGCGTCCGGTCAACATGCTCAAAACGTTGGAGTGCGACGACGAGTGCCGGCAGGAGGCGCGCAGCCGGCAGCTGGCGCTCGCGCTGCAGATCCGCAACCCGGACGTGTCGGCCAAGCTGGCGCCGCGGTACAGCGAGCACGTGCGCGCGACCGCCGCGCGCGAGCCCGCCTTCGCGCAAAACGTGCACGACCGGCTCACCGAGCTGGTGCAGCGCGCCAAGAACTCGAAGCAGAAGACCCGGTCGCACTCGTTCCCGTCGATGAACCGCCAGAAGCGGCAGTTCATCCACGAGATGTGCGAGCACTTCGGCTGCGAGAGCATCGCGTACGACGCCGAGCCAAACAGGAACGTCGTCGCCACCGCCGACAGGGAGAAGGTGGCGTCTTCTGACTTCGTGCTGGAGGTGCTGGAGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCGGTGCTGCGCGCGCCCGCCGCGCCCGGCCCGCTCGCCGCCGGCAAATCAACAGGCGGATGGGCCACGCTGACATCCACCAATGCGTGGGCGGCGCGCAGCGCTCGCTCCGCCCCTCAACAACAACAGCCACAGCAACAACAACAACAACTGCAGCCGCAACAGCCGCAACAGCCCGCGGCGCCCAAAATCGATTACTTCGACAACCCGCCTGACAATTAG
Protein Sequence: MSQWNNSYAYNNQYQGHSTWNGDMNGQYQAYYPNNRQFDTSNQYVSFNEFLAQMQSAGGHAANPVAYNNIQYPNFPNNQYSYQNIPAQSAQMDHSYGGNAASNIVPLNTAEQPQVYQTDAHHHKQYDPALAETNKYNEMVFNSKLTPTATEFVPKSSGVDAASNSNSISHLNKPSTSKIFNETVNISNSSSQNKPTRETNWRERPQTSNGGSNAEEIVDRQNKYYKQNRNGSANNYEKYNQNNDSNNHTQDSYYRNQESSKANHVANGHNQDGNSSRYVPDNNDDNVDTSTRHQERSKRNNESNSYQKSNNRYYDSNNHSREQSRNNDSYRGEESQSRPSSKHNNKNKETDAGRMFYNSSIPKGSQDVRNGRGDGSGRRGWAGSQRVRTNERNIFEDEQYANTYLQHREDKLNKETKPSPSRNRNNKNGTNSGANVEMTQRERLSEQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLKCIRKWALSSVIEGKWRCPACQNASNEIPTEYRCMCGAVRNPEYQRGAGGAHTCGRACQRPRSCPHPCTLLCHPGPCPPCQATVNKHCGCGTETRSILCSSKLPQVCGRVCHKTLDCGVHTCQKECHEGPCDECKETVTQVCHCAVSKSRVVACERGATAQWACGAECGRVLACGAHVCRRECHAPPCSACPLRPDNVSACPCGKTGIQMGQRKSCTDPIPLCDNICAKPLRCGPDEERHFCKEKCHEGECPVCPDSTHLQCRCGHSTREVPCRDLPDLRNSVTCQRKCNKKLSCGRHRCREVCCAGGEHLCTVVCGRSLFCQQHRCEEYCHAGHCAPCPRLNFEEVRCECGSSVLLPPVRCGARPPACDAACARARPCGHPPHHSCHVGDCPPCVVLTARVCHGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPSCGHACAAPCHAGAGGACPSAAPCRRSVRATCPCGRRSAERACCDNARDLARIMSQLAVSKMQEGGSVDLSDVQRPVNMLKTLECDDECRQEARSRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAQNVHDRLTELVQRAKNSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCESIAYDAEPNRNVVATADREKVASSDFVLEVLEREAGKRRVPGPVLRAPAAPGPLAAGKSTGGWATLTSTNAWAARSARSAPQQQQPQQQQQQLQPQQPQQPAAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01439575;
90% Identity: -
80% Identity: -