Tlin028678.1
Basic Information
- Insect
- Thymelicus lineola
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_963932265.1
- Location
- OZ010705.1:9600380-9602854[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.01 1.8e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 3.1e-07 0.0055 17.6 15.9 3 19 186 202 185 202 0.95 4 19 1.2e-07 0.0022 18.9 13.1 3 19 239 255 237 255 0.91 5 19 3e-10 5.2e-06 27.3 11.6 1 19 290 308 290 308 0.99 6 19 1.6e-06 0.028 15.4 18.3 3 19 345 361 344 361 0.93 7 19 0.15 2.6e+03 -0.5 0.3 7 13 365 371 365 372 0.82 8 19 0.23 4e+03 -1.1 1.4 1 11 370 380 370 381 0.81 9 19 0.0033 57 4.8 17.9 3 18 397 412 395 413 0.91 10 19 7.8e-08 0.0014 19.6 18.5 1 18 422 439 422 440 0.98 11 19 7.7e-05 1.4 10.0 5.9 9 19 488 498 486 498 0.91 12 19 0.018 3.1e+02 2.4 7.2 3 11 509 517 508 518 0.89 13 19 0.37 6.6e+03 -1.8 3.3 14 18 547 551 547 552 0.85 14 19 0.23 4.1e+03 -1.1 0.1 8 12 568 572 567 573 0.82 15 19 5.1e-06 0.09 13.8 4.3 1 11 588 598 588 599 0.97 16 19 0.45 7.9e+03 -2.0 2.2 13 18 611 616 610 617 0.80 17 19 0.00087 15 6.6 15.5 3 18 629 645 628 646 0.84 18 19 2 3.5e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 1.1e-05 0.19 12.7 9.7 1 16 687 701 687 707 0.92
Sequence Information
- Coding Sequence
- atggCACGAAGATATCGTGACGCGGCGGCGAAACTGCAACAAAATGTGCAGAAACATTTAAAACAAATGAAGGACGTCTCTTCTTCGGAAGATGAAGAGCCCTACGAGACCAGTGTCCTGGAAGGAGTGTTCCAGAGTTACTGGAGAGGCGGAGGAGACAATCAGATGGTAAACAGAACAAAGCATCTTCTAGAAGAAGCGGTAAGCGGCCGGTCAGTGACGTGTCTTATTTGCATTGGGTCTATCAAAAGGAACGACGCGATTTGGACCTGTGACCACTGTTTCTGTTACTTCCACCTCTTTTGCATACAAAAGTGGGCGAATGACAGCATAAGTTTAAGAACAGAAGAAAATGTAGGGCCCATAGCTGTTGTTGTGCCTAAGAAAATTGAATGGTGTTGTCCGAAATGTCGGCAGTCGTACTGCAAGGAAGAAATACCGCGTCGGTATCATTGTTTCTGTGGTAAAACCGAGGACCCCCCATTTCATCCATGGTTGATACCTCATACCTGTGGAGAAGTCTGTGGGAAAAGGTTATCTATCGGTGATAATTGTAAACACAAGTGCCTACTTCTCTGCCACCCTGGGCCTTGCCCACCTTGTCCACAGACAGTCAATGGCGTCTGTTATTGCGAAAAGGAGTCGAAACGAGTGAGATGCAGTGCAGCGAAATGGTCATGTGGGAAACAGTGCAAAAAATTATTGCTGTGCAAGTCCCATAAGTGTGAAAACTTATGCCACGAAGGCGTCTGCCCACCTTGCACTTATACAAGTCTACAACCATGTCTCTGTGGATCTGAAAAAGTTAAAAGACCTTGTGATGATCTAAACTGGCAGTGTtctaaaaaatgtaataaacctttCTCATGTGGTTACCACAAATGTGAAAGGATATGTCACGTCGGAGACTGTGGGTCGTGCCCCAATTCTGGGATGAGGTTCTGCCCCTGTGGAGCCGATAAGAAATTTATTGAATGCCCGAATACCATTGATACTTGTTTTGGAACTTGTAACAAAAAGCATGATGACTGTGAACATAGTTGTCCTGAGAAATGCCACAAGGGACCTTGCCCTCCTTGTCAGGTTGTGATAGAAAAGACATGTCATTGCGGTGCTCACACCAAATCACTGCCATGCTGCAAGGATTTCCGCTGTGAAACCAAGTGCAGAGGGACCAGACCGTGTAGAAAACATGGCTGTGGAAGAAAATGCTGCAACGGAAACTGTCCCCCATGTGAAAAAGTGTGTGATAAACCTTTGCTGTGTGGCCGACATAAATGTACGAATATCTGTCACCATGGTCCTTGCTATCCTTGCCATCGCGAATCAAAGATTACTTGCCGTTGCAAGGAAACTTACATAACTGTTCCCTGCGGTAGAGAAAAACATATCAAGCCGCCAAAATGCAGCCTCCCTTGTAAAATTAAGTACAAGTGTGGTCATGTAGATGAAAACCGACACACTTGTCATTTTGGAGATTGCCCTCCTTGCAAGGCTATATGCTTGAAAGCCTATCAAAAATGTGAGCATAACTGCAAAGCTGTATGCCATCAATATGTTGCTGTGGTTTTCAAGCAGGTTGAAAAACCTGCAACACCATGGGAAGTTCAACCGCCTAAGACTAAGATTATGACCCTGGAATGCCCACCATGTGAGACTCCTGTACCAGTGACATGTTTTGGTGAACATGAGACTGAAGACCAGCCCTGCCATTCTGCAACTCGACGTCCCTGTGGCAGAGAATGTGGCCAGCCATTAGCTTGTGGAAACCACAAGTGTGCTCTACTTTGCCATCTGCTGAGTTCTGATCCTAATTATCCAAATGTGCCTCAGTCATGCAAACCGTGTAATAGAGAATGTTCGGTGAGACGCCCAGAGAAATGTATGCACAAGTGTCCAAAGCGTGGATGCCATCCAGGTCGTTGCCCTCCTTGCGACATCTTGGAAAGACTTCCTTGCCACTGTGGTGTAGCTGAACTGTACCTACGTTGTCAAGAACTCAGCTCAGCTACAGAAGACATGCTATCCTGCAAACAGCAATGCCCGAGAAACTTGCCATGCGGTCATCGTTGCAGGAATAACTGCCACTCAGGACAATGTGATCAAAATCAGATTTGTCTTAagaaaacaaaagtttattgtCCTTGTGGGAATATCAAGAAGGAAGCACCCTGCAAAGCTGTTCGGGATTCAGAAGTTAATGTAGTATGTGATCAGAACTGTGAAGAGAAGAAGATCGCGGCGAAATTAGAGAAAGAGAAGGAAGAACAGAGGTTAAAAGAGTTGGAGGAGGAGAAAAATCGCAGAGAATTAGCGGAATATGAATGGAAGTTGAGTGGTAAGAAGAAGAAGTATAAAGAAAAGAAGGTTGTGGTTAATGTAGACAACAGAGGTCTGTTGCAGAAATATTGGGTTCCTATTTCCTCCCTATTAGTTGTAATAGTAGCTGGATTTTACTATATACTGTATGTGTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKQMKDVSSSEDEEPYETSVLEGVFQSYWRGGGDNQMVNRTKHLLEEAVSGRSVTCLICIGSIKRNDAIWTCDHCFCYFHLFCIQKWANDSISLRTEENVGPIAVVVPKKIEWCCPKCRQSYCKEEIPRRYHCFCGKTEDPPFHPWLIPHTCGEVCGKRLSIGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKESKRVRCSAAKWSCGKQCKKLLLCKSHKCENLCHEGVCPPCTYTSLQPCLCGSEKVKRPCDDLNWQCSKKCNKPFSCGYHKCERICHVGDCGSCPNSGMRFCPCGADKKFIECPNTIDTCFGTCNKKHDDCEHSCPEKCHKGPCPPCQVVIEKTCHCGAHTKSLPCCKDFRCETKCRGTRPCRKHGCGRKCCNGNCPPCEKVCDKPLLCGRHKCTNICHHGPCYPCHRESKITCRCKETYITVPCGREKHIKPPKCSLPCKIKYKCGHVDENRHTCHFGDCPPCKAICLKAYQKCEHNCKAVCHQYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCETPVPVTCFGEHETEDQPCHSATRRPCGRECGQPLACGNHKCALLCHLLSSDPNYPNVPQSCKPCNRECSVRRPEKCMHKCPKRGCHPGRCPPCDILERLPCHCGVAELYLRCQELSSATEDMLSCKQQCPRNLPCGHRCRNNCHSGQCDQNQICLKKTKVYCPCGNIKKEAPCKAVRDSEVNVVCDQNCEEKKIAAKLEKEKEEQRLKELEEEKNRRELAEYEWKLSGKKKKYKEKKVVVNVDNRGLLQKYWVPISSLLVVIVAGFYYILYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167395;
- 90% Identity
- iTF_00796163;
- 80% Identity
- -